Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 Y_RNA.712-201ENST00000517011 92 ntBASIC2.77□□□□□ -1.97
PDLIM7Q9NR12 AC131055.1-201ENST00000584626 316 ntBASIC2.77□□□□□ -1.97
PDLIM7Q9NR12 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
PDLIM7Q9NR12 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PDLIM7Q9NR12 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PDLIM7Q9NR12 snoU2-30.2-201ENST00000362805 70 ntBASIC2.76□□□□□ -1.97
PDLIM7Q9NR12 Y_RNA.486-201ENST00000384398 107 ntBASIC2.76□□□□□ -1.97
PDLIM7Q9NR12 AL359511.1-201ENST00000402970 211 ntBASIC2.76□□□□□ -1.97
PDLIM7Q9NR12 RNU6-1064P-201ENST00000410626 104 ntBASIC2.76□□□□□ -1.97
PDLIM7Q9NR12 RNA5SP247-201ENST00000411181 105 ntBASIC2.76□□□□□ -1.97
PDLIM7Q9NR12 MLLT10P1-201ENST00000418346 262 ntBASIC2.76□□□□□ -1.97
PDLIM7Q9NR12 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PDLIM7Q9NR12 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.76□□□□□ -1.97
PDLIM7Q9NR12 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.76□□□□□ -1.97
PDLIM7Q9NR12 AC233266.1-201ENST00000454518 96 ntBASIC2.76□□□□□ -1.97
PDLIM7Q9NR12 AC018868.1-201ENST00000491307 315 ntBASIC2.76□□□□□ -1.97
PDLIM7Q9NR12 RNU6-1041P-201ENST00000516254 102 ntBASIC2.76□□□□□ -1.97
PDLIM7Q9NR12 MIR5092-201ENST00000583139 88 ntBASIC2.76□□□□□ -1.97
PDLIM7Q9NR12 AC242852.1-201ENST00000612151 96 ntBASIC2.76□□□□□ -1.97
PDLIM7Q9NR12 AC244015.1-201ENST00000622301 99 ntBASIC2.76□□□□□ -1.97
PDLIM7Q9NR12 AC016717.2-201ENST00000609089 5141 ntBASIC2.76□□□□□ -1.97
PDLIM7Q9NR12 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
PDLIM7Q9NR12 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
PDLIM7Q9NR12 RNU6-1138P-201ENST00000365359 106 ntBASIC2.75□□□□□ -1.97
PDLIM7Q9NR12 RNU6-429P-201ENST00000384582 108 ntBASIC2.75□□□□□ -1.97
PDLIM7Q9NR12 RNA5SP467-201ENST00000391274 118 ntBASIC2.75□□□□□ -1.97
PDLIM7Q9NR12 SNORA26-201ENST00000391286 122 ntBASIC2.75□□□□□ -1.97
PDLIM7Q9NR12 RPS15AP28-201ENST00000435088 386 ntBASIC2.75□□□□□ -1.97
PDLIM7Q9NR12 RPL39P40-201ENST00000445481 146 ntBASIC2.75□□□□□ -1.97
PDLIM7Q9NR12 RNU7-99P-201ENST00000516271 62 ntBASIC2.75□□□□□ -1.97
PDLIM7Q9NR12 RNU7-128P-201ENST00000517247 62 ntBASIC2.75□□□□□ -1.97
PDLIM7Q9NR12 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.75□□□□□ -1.97
PDLIM7Q9NR12 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
PDLIM7Q9NR12 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.74□□□□□ -1.97
PDLIM7Q9NR12 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.74□□□□□ -1.97
PDLIM7Q9NR12 AC131280.1-202ENST00000624067 4211 ntBASIC2.74□□□□□ -1.97
PDLIM7Q9NR12 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
PDLIM7Q9NR12 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.74□□□□□ -1.97
PDLIM7Q9NR12 SUMO1P4-201ENST00000429430 302 ntBASIC2.74□□□□□ -1.97
PDLIM7Q9NR12 AL158147.1-201ENST00000443970 75 ntBASIC2.74□□□□□ -1.97
PDLIM7Q9NR12 NDUFA4P2-201ENST00000489989 244 ntBASIC2.74□□□□□ -1.97
PDLIM7Q9NR12 RNU6-772P-201ENST00000516042 105 ntBASIC2.74□□□□□ -1.97
PDLIM7Q9NR12 RNU6-1291P-201ENST00000516591 104 ntBASIC2.74□□□□□ -1.97
PDLIM7Q9NR12 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.74□□□□□ -1.97
PDLIM7Q9NR12 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.74□□□□□ -1.97
PDLIM7Q9NR12 MIR4662B-201ENST00000579498 81 ntBASIC2.74□□□□□ -1.97
PDLIM7Q9NR12 MIR3121-201ENST00000579680 77 ntBASIC2.74□□□□□ -1.97
PDLIM7Q9NR12 AC007229.1-201ENST00000590455 412 ntBASIC2.74□□□□□ -1.97
PDLIM7Q9NR12 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PDLIM7Q9NR12 Y_RNA.114-201ENST00000363265 113 ntBASIC2.73□□□□□ -1.97
PDLIM7Q9NR12 SNORA25B-201ENST00000365507 128 ntBASIC2.73□□□□□ -1.97
PDLIM7Q9NR12 SNORD18B-201ENST00000365659 72 ntBASIC2.73□□□□□ -1.97
PDLIM7Q9NR12 RNU6-476P-201ENST00000384726 107 ntBASIC2.73□□□□□ -1.97
PDLIM7Q9NR12 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.73□□□□□ -1.97
PDLIM7Q9NR12 RPS12P2-201ENST00000439728 269 ntBASIC2.73□□□□□ -1.97
PDLIM7Q9NR12 RN7SL499P-201ENST00000481141 276 ntBASIC2.73□□□□□ -1.97
PDLIM7Q9NR12 RNU5E-3P-201ENST00000515913 68 ntBASIC2.73□□□□□ -1.97
PDLIM7Q9NR12 RNA5SP281-201ENST00000516504 135 ntBASIC2.73□□□□□ -1.97
PDLIM7Q9NR12 RNU6-365P-201ENST00000517113 106 ntBASIC2.73□□□□□ -1.97
PDLIM7Q9NR12 RNU2-60P-201ENST00000517290 128 ntBASIC2.73□□□□□ -1.97
PDLIM7Q9NR12 AC007536.1-201ENST00000533382 349 ntBASIC2.73□□□□□ -1.97
PDLIM7Q9NR12 MIR3126-201ENST00000577443 74 ntBASIC2.73□□□□□ -1.97
PDLIM7Q9NR12 AC026271.5-201ENST00000577873 130 ntBASIC2.73□□□□□ -1.97
PDLIM7Q9NR12 MIR4658-201ENST00000584344 65 ntBASIC2.73□□□□□ -1.97
PDLIM7Q9NR12 AC091178.2-201ENST00000584401 117 ntBASIC2.73□□□□□ -1.97
PDLIM7Q9NR12 MIR6129-201ENST00000616087 109 ntBASIC2.73□□□□□ -1.97
PDLIM7Q9NR12 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
PDLIM7Q9NR12 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
PDLIM7Q9NR12 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PDLIM7Q9NR12 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PDLIM7Q9NR12 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PDLIM7Q9NR12 RNU6-508P-201ENST00000363231 103 ntBASIC2.72□□□□□ -1.97
PDLIM7Q9NR12 RNU6-153P-201ENST00000364422 104 ntBASIC2.72□□□□□ -1.97
PDLIM7Q9NR12 Y_RNA.253-201ENST00000364562 112 ntBASIC2.72□□□□□ -1.97
PDLIM7Q9NR12 RNU1-91P-201ENST00000364746 163 ntBASIC2.72□□□□□ -1.97
PDLIM7Q9NR12 Y_RNA.280-201ENST00000364765 112 ntBASIC2.72□□□□□ -1.97
PDLIM7Q9NR12 RNU6-1144P-201ENST00000384247 104 ntBASIC2.72□□□□□ -1.97
PDLIM7Q9NR12 SNORA12.1-201ENST00000390873 148 ntBASIC2.72□□□□□ -1.97
PDLIM7Q9NR12 EDDM3CP-201ENST00000415977 425 ntBASIC2.72□□□□□ -1.97
PDLIM7Q9NR12 HMGN1P7-201ENST00000491722 313 ntBASIC2.72□□□□□ -1.97
PDLIM7Q9NR12 RNA5SP458-201ENST00000516188 119 ntBASIC2.72□□□□□ -1.97
PDLIM7Q9NR12 SNORA18.4-201ENST00000516440 124 ntBASIC2.72□□□□□ -1.97
PDLIM7Q9NR12 Y_RNA.690-201ENST00000516603 95 ntBASIC2.72□□□□□ -1.97
PDLIM7Q9NR12 RNU6-126P-201ENST00000516685 103 ntBASIC2.72□□□□□ -1.97
PDLIM7Q9NR12 AC007751.1-201ENST00000529260 376 ntBASIC2.72□□□□□ -1.97
PDLIM7Q9NR12 AC103810.6-201ENST00000606708 136 ntBASIC2.72□□□□□ -1.97
PDLIM7Q9NR12 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.72□□□□□ -1.97
PDLIM7Q9NR12 AL359075.3-201ENST00000613288 217 ntBASIC2.72□□□□□ -1.97
PDLIM7Q9NR12 AL353997.5-201ENST00000618886 171 ntBASIC2.72□□□□□ -1.97
PDLIM7Q9NR12 MIR338-201ENST00000636369 67 ntBASIC2.72□□□□□ -1.97
PDLIM7Q9NR12 MIR3914-2-201ENST00000637339 95 ntBASIC2.72□□□□□ -1.97
PDLIM7Q9NR12 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
PDLIM7Q9NR12 Y_RNA.66-201ENST00000362862 102 ntBASIC2.71□□□□□ -1.98
PDLIM7Q9NR12 SNORD114-6-201ENST00000364393 72 ntBASIC2.71□□□□□ -1.98
PDLIM7Q9NR12 Y_RNA.267-201ENST00000364679 109 ntBASIC2.71□□□□□ -1.98
PDLIM7Q9NR12 SNORA40.5-201ENST00000391061 128 ntBASIC2.71□□□□□ -1.98
PDLIM7Q9NR12 AL603914.1-201ENST00000401964 204 ntBASIC2.71□□□□□ -1.98
PDLIM7Q9NR12 HMGN2P35-201ENST00000412164 270 ntBASIC2.71□□□□□ -1.98
PDLIM7Q9NR12 SNRPGP10-201ENST00000432323 225 ntBASIC2.71□□□□□ -1.98
PDLIM7Q9NR12 MRPS17P9-201ENST00000511924 393 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms