Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 MIR3149-201ENST00000584629 83 ntBASIC1.73□□□□□ -2.13
DDX4Q9NQI0 AP003357.1-201ENST00000604497 148 ntBASIC1.73□□□□□ -2.13
DDX4Q9NQI0 MIR8054-201ENST00000620877 86 ntBASIC1.73□□□□□ -2.13
DDX4Q9NQI0 AC068647.2-201ENST00000637380 353 ntBASIC1.73□□□□□ -2.13
DDX4Q9NQI0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
DDX4Q9NQI0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.73□□□□□ -2.13
DDX4Q9NQI0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
DDX4Q9NQI0 Y_RNA.267-201ENST00000364679 109 ntBASIC1.72□□□□□ -2.13
DDX4Q9NQI0 Y_RNA.275-201ENST00000364726 110 ntBASIC1.72□□□□□ -2.13
DDX4Q9NQI0 RNU6-392P-201ENST00000364926 101 ntBASIC1.72□□□□□ -2.13
DDX4Q9NQI0 MIR1287-201ENST00000408492 90 ntBASIC1.72□□□□□ -2.13
DDX4Q9NQI0 AL135790.2-201ENST00000437701 267 ntBASIC1.72□□□□□ -2.13
DDX4Q9NQI0 AC104332.1-201ENST00000440471 797 ntBASIC1.72□□□□□ -2.13
DDX4Q9NQI0 AL606517.2-201ENST00000442855 241 ntBASIC1.72□□□□□ -2.13
DDX4Q9NQI0 SNORD127-201ENST00000458892 86 ntBASIC1.72□□□□□ -2.13
DDX4Q9NQI0 RNU1-92P-201ENST00000517017 135 ntBASIC1.72□□□□□ -2.13
DDX4Q9NQI0 MIR4709-201ENST00000577272 72 ntBASIC1.72□□□□□ -2.13
DDX4Q9NQI0 MIR4503-201ENST00000582187 83 ntBASIC1.72□□□□□ -2.13
DDX4Q9NQI0 AC103810.8-201ENST00000607347 118 ntBASIC1.72□□□□□ -2.13
DDX4Q9NQI0 MIR548AY-201ENST00000617669 107 ntBASIC1.72□□□□□ -2.13
DDX4Q9NQI0 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.72□□□□□ -2.13
DDX4Q9NQI0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
DDX4Q9NQI0 RNU6-1272P-201ENST00000362776 107 ntBASIC1.71□□□□□ -2.14
DDX4Q9NQI0 RNU6-899P-201ENST00000363947 107 ntBASIC1.71□□□□□ -2.14
DDX4Q9NQI0 Y_RNA.217-201ENST00000364214 105 ntBASIC1.71□□□□□ -2.14
DDX4Q9NQI0 RNA5SP363-201ENST00000365072 115 ntBASIC1.71□□□□□ -2.14
DDX4Q9NQI0 RNU6-136P-201ENST00000384663 107 ntBASIC1.71□□□□□ -2.14
DDX4Q9NQI0 RNU6-440P-201ENST00000390882 105 ntBASIC1.71□□□□□ -2.14
DDX4Q9NQI0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.71□□□□□ -2.14
DDX4Q9NQI0 Y_RNA.641-201ENST00000459414 105 ntBASIC1.71□□□□□ -2.14
DDX4Q9NQI0 RPL39P38-201ENST00000467018 153 ntBASIC1.71□□□□□ -2.14
DDX4Q9NQI0 RNU7-115P-201ENST00000516433 55 ntBASIC1.71□□□□□ -2.14
DDX4Q9NQI0 RNU6-1291P-201ENST00000516591 104 ntBASIC1.71□□□□□ -2.14
DDX4Q9NQI0 AC011604.1-201ENST00000545978 196 ntBASIC1.71□□□□□ -2.14
DDX4Q9NQI0 AC127455.1-201ENST00000565496 145 ntBASIC1.71□□□□□ -2.14
DDX4Q9NQI0 POLR3GP1-201ENST00000594073 261 ntBASIC1.71□□□□□ -2.14
DDX4Q9NQI0 AC062037.2-201ENST00000610137 73 ntBASIC1.71□□□□□ -2.14
DDX4Q9NQI0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
DDX4Q9NQI0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
DDX4Q9NQI0 MIR337-201ENST00000362281 93 ntBASIC1.7□□□□□ -2.14
DDX4Q9NQI0 Y_RNA.14-201ENST00000362415 103 ntBASIC1.7□□□□□ -2.14
DDX4Q9NQI0 RNU6-414P-201ENST00000363705 104 ntBASIC1.7□□□□□ -2.14
DDX4Q9NQI0 RNU6-801P-201ENST00000364087 105 ntBASIC1.7□□□□□ -2.14
DDX4Q9NQI0 Y_RNA.562-201ENST00000384695 113 ntBASIC1.7□□□□□ -2.14
DDX4Q9NQI0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
DDX4Q9NQI0 RNA5SP482-201ENST00000391269 118 ntBASIC1.7□□□□□ -2.14
DDX4Q9NQI0 AL034345.1-201ENST00000407768 123 ntBASIC1.7□□□□□ -2.14
DDX4Q9NQI0 RNU2-38P-201ENST00000410856 79 ntBASIC1.7□□□□□ -2.14
DDX4Q9NQI0 AC233266.1-201ENST00000454518 96 ntBASIC1.7□□□□□ -2.14
DDX4Q9NQI0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.7□□□□□ -2.14
DDX4Q9NQI0 RNU1-98P-201ENST00000458992 160 ntBASIC1.7□□□□□ -2.14
DDX4Q9NQI0 RNU6-1132P-201ENST00000459214 107 ntBASIC1.7□□□□□ -2.14
DDX4Q9NQI0 RNU7-34P-201ENST00000459394 64 ntBASIC1.7□□□□□ -2.14
DDX4Q9NQI0 AC242852.1-201ENST00000612151 96 ntBASIC1.7□□□□□ -2.14
DDX4Q9NQI0 AC244015.1-201ENST00000622301 99 ntBASIC1.7□□□□□ -2.14
DDX4Q9NQI0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
DDX4Q9NQI0 SNORA1B-201ENST00000362535 133 ntBASIC1.69□□□□□ -2.14
DDX4Q9NQI0 Y_RNA.350-201ENST00000365409 98 ntBASIC1.69□□□□□ -2.14
DDX4Q9NQI0 RNU6-144P-201ENST00000383951 107 ntBASIC1.69□□□□□ -2.14
DDX4Q9NQI0 MIR320A-201ENST00000385302 82 ntBASIC1.69□□□□□ -2.14
DDX4Q9NQI0 RNU6-763P-201ENST00000390865 106 ntBASIC1.69□□□□□ -2.14
DDX4Q9NQI0 RNU7-141P-201ENST00000459304 62 ntBASIC1.69□□□□□ -2.14
DDX4Q9NQI0 AC024405.2-202ENST00000532731 184 ntBASIC1.69□□□□□ -2.14
DDX4Q9NQI0 MIR3122-201ENST00000577243 73 ntBASIC1.69□□□□□ -2.14
DDX4Q9NQI0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.69□□□□□ -2.14
DDX4Q9NQI0 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
DDX4Q9NQI0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.69□□□□□ -2.14
DDX4Q9NQI0 Y_RNA.265-201ENST00000364677 108 ntBASIC1.68□□□□□ -2.14
DDX4Q9NQI0 SNORA4.2-201ENST00000365313 147 ntBASIC1.68□□□□□ -2.14
DDX4Q9NQI0 RNU6-662P-201ENST00000384253 104 ntBASIC1.68□□□□□ -2.14
DDX4Q9NQI0 Y_RNA.478-201ENST00000384358 107 ntBASIC1.68□□□□□ -2.14
DDX4Q9NQI0 RNU6-1031P-201ENST00000384773 107 ntBASIC1.68□□□□□ -2.14
DDX4Q9NQI0 SNORA26.5-201ENST00000391215 123 ntBASIC1.68□□□□□ -2.14
DDX4Q9NQI0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.68□□□□□ -2.14
DDX4Q9NQI0 BTF3P11-201ENST00000426582 477 ntBASIC1.68□□□□□ -2.14
DDX4Q9NQI0 AL049830.1-201ENST00000468034 425 ntBASIC1.68□□□□□ -2.14
DDX4Q9NQI0 AC117454.1-201ENST00000491120 168 ntBASIC1.68□□□□□ -2.14
DDX4Q9NQI0 RPL23AP54-201ENST00000495129 419 ntBASIC1.68□□□□□ -2.14
DDX4Q9NQI0 SNORA31.10-201ENST00000516482 106 ntBASIC1.68□□□□□ -2.14
DDX4Q9NQI0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.68□□□□□ -2.14
DDX4Q9NQI0 AC012433.1-201ENST00000588916 398 ntBASIC1.68□□□□□ -2.14
DDX4Q9NQI0 AL929325.1-201ENST00000603096 117 ntBASIC1.68□□□□□ -2.14
DDX4Q9NQI0 AC013791.1-201ENST00000616619 62 ntBASIC1.68□□□□□ -2.14
DDX4Q9NQI0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
DDX4Q9NQI0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.67□□□□□ -2.14
DDX4Q9NQI0 Y_RNA.82-201ENST00000363000 102 ntBASIC1.67□□□□□ -2.14
DDX4Q9NQI0 Y_RNA.92-201ENST00000363043 102 ntBASIC1.67□□□□□ -2.14
DDX4Q9NQI0 Y_RNA.235-201ENST00000364412 102 ntBASIC1.67□□□□□ -2.14
DDX4Q9NQI0 U8.7-201ENST00000364940 136 ntBASIC1.67□□□□□ -2.14
DDX4Q9NQI0 Y_RNA.306-201ENST00000365015 102 ntBASIC1.67□□□□□ -2.14
DDX4Q9NQI0 Y_RNA.312-201ENST00000365089 102 ntBASIC1.67□□□□□ -2.14
DDX4Q9NQI0 Y_RNA.322-201ENST00000365151 102 ntBASIC1.67□□□□□ -2.14
DDX4Q9NQI0 RNU6-53P-201ENST00000365367 106 ntBASIC1.67□□□□□ -2.14
DDX4Q9NQI0 RNU6-1289P-201ENST00000384431 106 ntBASIC1.67□□□□□ -2.14
DDX4Q9NQI0 Y_RNA.618-201ENST00000410949 107 ntBASIC1.67□□□□□ -2.14
DDX4Q9NQI0 Y_RNA.621-201ENST00000411065 96 ntBASIC1.67□□□□□ -2.14
DDX4Q9NQI0 RPL30P13-201ENST00000418873 348 ntBASIC1.67□□□□□ -2.14
DDX4Q9NQI0 Y_RNA.650-201ENST00000459002 102 ntBASIC1.67□□□□□ -2.14
DDX4Q9NQI0 Y_RNA.777-201ENST00000516982 102 ntBASIC1.67□□□□□ -2.14
DDX4Q9NQI0 Y_RNA.771-201ENST00000598668 102 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms