Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 AC004817.2-201ENST00000561794 651 ntBASIC1.59□□□□□ -2.15
HINT3Q9NQE9 MIR3618-201ENST00000580330 88 ntBASIC1.59□□□□□ -2.15
HINT3Q9NQE9 AL513423.1-201ENST00000621695 132 ntBASIC1.59□□□□□ -2.15
HINT3Q9NQE9 MIR424-201ENST00000362227 98 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 MIR126-201ENST00000362291 85 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 RNU6-1123P-201ENST00000362347 106 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.54-201ENST00000362766 105 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.82-201ENST00000363000 102 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.92-201ENST00000363043 102 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 SNORD68-201ENST00000363214 84 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 RNU6-674P-201ENST00000363831 107 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.235-201ENST00000364412 102 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.277-201ENST00000364754 102 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.306-201ENST00000365015 102 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.312-201ENST00000365089 102 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.322-201ENST00000365151 102 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.350-201ENST00000365409 98 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 RNU6-144P-201ENST00000383951 107 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 RNU6-424P-201ENST00000384367 105 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 MIR9-3-201ENST00000385084 90 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 U8.16-201ENST00000391279 133 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 SNORA26.9-201ENST00000391322 122 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 PGBD4P5-201ENST00000445958 426 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.650-201ENST00000459002 102 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 HMGN1P7-201ENST00000491722 313 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.777-201ENST00000516982 102 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 MIR3122-201ENST00000577243 73 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 MIR3198-2-201ENST00000577868 80 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.771-201ENST00000598668 102 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.789-201ENST00000622480 102 ntBASIC1.58□□□□□ -2.16
HINT3Q9NQE9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
HINT3Q9NQE9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HINT3Q9NQE9 MIRLET7C-201ENST00000362160 84 ntBASIC1.57□□□□□ -2.16
HINT3Q9NQE9 U8.5-201ENST00000364528 136 ntBASIC1.57□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.416-201ENST00000384014 113 ntBASIC1.57□□□□□ -2.16
HINT3Q9NQE9 RPL30P13-201ENST00000418873 348 ntBASIC1.57□□□□□ -2.16
HINT3Q9NQE9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.57□□□□□ -2.16
HINT3Q9NQE9 SNORD2.1-201ENST00000458762 69 ntBASIC1.57□□□□□ -2.16
HINT3Q9NQE9 snoU13.9-201ENST00000458927 103 ntBASIC1.57□□□□□ -2.16
HINT3Q9NQE9 MTND1P19-201ENST00000511780 315 ntBASIC1.57□□□□□ -2.16
HINT3Q9NQE9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.57□□□□□ -2.16
HINT3Q9NQE9 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.57□□□□□ -2.16
HINT3Q9NQE9 DEFB122-202ENST00000569013 197 ntBASIC1.57□□□□□ -2.16
HINT3Q9NQE9 MIR4643-201ENST00000577473 78 ntBASIC1.57□□□□□ -2.16
HINT3Q9NQE9 MIR4762-201ENST00000585261 75 ntBASIC1.57□□□□□ -2.16
HINT3Q9NQE9 MIR6845-201ENST00000613182 61 ntBASIC1.57□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.122-201ENST00000363331 96 ntBASIC1.56□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.293-201ENST00000364908 93 ntBASIC1.56□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.477-201ENST00000384352 108 ntBASIC1.56□□□□□ -2.16
HINT3Q9NQE9 MIR660-201ENST00000385235 97 ntBASIC1.56□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.590-201ENST00000410140 107 ntBASIC1.56□□□□□ -2.16
HINT3Q9NQE9 MLLT10P1-201ENST00000418346 262 ntBASIC1.56□□□□□ -2.16
HINT3Q9NQE9 SNRPGP10-201ENST00000432323 225 ntBASIC1.56□□□□□ -2.16
HINT3Q9NQE9 AL591806.2-201ENST00000433122 173 ntBASIC1.56□□□□□ -2.16
HINT3Q9NQE9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.56□□□□□ -2.16
HINT3Q9NQE9 AC008834.1-201ENST00000511612 175 ntBASIC1.56□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.679-201ENST00000516416 91 ntBASIC1.56□□□□□ -2.16
HINT3Q9NQE9 RNU6-548P-201ENST00000517083 115 ntBASIC1.56□□□□□ -2.16
HINT3Q9NQE9 MIR4282-201ENST00000583613 67 ntBASIC1.56□□□□□ -2.16
HINT3Q9NQE9 SNORD3E-202ENST00000627253 216 ntBASIC1.56□□□□□ -2.16
HINT3Q9NQE9 ICE2P2-201ENST00000483823 2787 ntBASIC1.56□□□□□ -2.16
HINT3Q9NQE9 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
HINT3Q9NQE9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
HINT3Q9NQE9 RNU6-1209P-201ENST00000363655 107 ntBASIC1.55□□□□□ -2.16
HINT3Q9NQE9 SNORD27-201ENST00000363981 72 ntBASIC1.55□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.796-201ENST00000364268 102 ntBASIC1.55□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.799-201ENST00000364992 102 ntBASIC1.55□□□□□ -2.16
HINT3Q9NQE9 RNA5SP363-201ENST00000365072 115 ntBASIC1.55□□□□□ -2.16
HINT3Q9NQE9 RNU6-969P-201ENST00000383900 105 ntBASIC1.55□□□□□ -2.16
HINT3Q9NQE9 MIR522-201ENST00000385071 87 ntBASIC1.55□□□□□ -2.16
HINT3Q9NQE9 MIR1278-201ENST00000408753 81 ntBASIC1.55□□□□□ -2.16
HINT3Q9NQE9 RPL31P63-201ENST00000422565 375 ntBASIC1.55□□□□□ -2.16
HINT3Q9NQE9 snoU13.23-201ENST00000458863 104 ntBASIC1.55□□□□□ -2.16
HINT3Q9NQE9 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.55□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.680-201ENST00000516441 93 ntBASIC1.55□□□□□ -2.16
HINT3Q9NQE9 RNU6-1116P-201ENST00000517269 99 ntBASIC1.55□□□□□ -2.16
HINT3Q9NQE9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.55□□□□□ -2.16
HINT3Q9NQE9 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.55□□□□□ -2.16
HINT3Q9NQE9 AC015688.6-201ENST00000577737 104 ntBASIC1.55□□□□□ -2.16
HINT3Q9NQE9 MIR2681-201ENST00000581814 105 ntBASIC1.55□□□□□ -2.16
HINT3Q9NQE9 MIR3128-201ENST00000581957 66 ntBASIC1.55□□□□□ -2.16
HINT3Q9NQE9 BX284668.6-201ENST00000606899 438 ntBASIC1.55□□□□□ -2.16
HINT3Q9NQE9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.55□□□□□ -2.16
HINT3Q9NQE9 JPX_2.1-201ENST00000614161 69 ntBASIC1.55□□□□□ -2.16
HINT3Q9NQE9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.55□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.307-201ENST00000365022 117 ntBASIC1.54□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.447-201ENST00000384184 113 ntBASIC1.54□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.478-201ENST00000384358 107 ntBASIC1.54□□□□□ -2.16
HINT3Q9NQE9 MIR513A1-201ENST00000385138 129 ntBASIC1.54□□□□□ -2.16
HINT3Q9NQE9 RNU6-383P-201ENST00000410864 94 ntBASIC1.54□□□□□ -2.16
HINT3Q9NQE9 HSPE1P24-201ENST00000450782 238 ntBASIC1.54□□□□□ -2.16
HINT3Q9NQE9 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.54□□□□□ -2.16
HINT3Q9NQE9 AC108210.2-201ENST00000503681 201 ntBASIC1.54□□□□□ -2.16
HINT3Q9NQE9 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.54□□□□□ -2.16
HINT3Q9NQE9 RNU7-12P-201ENST00000516030 62 ntBASIC1.54□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.673-201ENST00000516306 88 ntBASIC1.54□□□□□ -2.16
HINT3Q9NQE9 SUMO2P16-201ENST00000519475 264 ntBASIC1.54□□□□□ -2.16
HINT3Q9NQE9 MIR4778-201ENST00000577635 80 ntBASIC1.54□□□□□ -2.16
HINT3Q9NQE9 AC120024.3-201ENST00000603167 156 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms