Protein–RNA interactions for Protein: Q9NPG4

PCDH12, Protocadherin-12, humanhuman

Predictions only

Length 1,184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12Q9NPG4 snoU13.26-201ENST00000459452 105 ntBASIC2.06□□□□□ -2.08
PCDH12Q9NPG4 RNA5SP445-201ENST00000515889 115 ntBASIC2.06□□□□□ -2.08
PCDH12Q9NPG4 RNU6-322P-201ENST00000516010 103 ntBASIC2.06□□□□□ -2.08
PCDH12Q9NPG4 Y_RNA.679-201ENST00000516416 91 ntBASIC2.06□□□□□ -2.08
PCDH12Q9NPG4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.06□□□□□ -2.08
PCDH12Q9NPG4 AC092881.1-201ENST00000638218 2733 ntBASIC2.05□□□□□ -2.08
PCDH12Q9NPG4 RNU6-1209P-201ENST00000363655 107 ntBASIC2.05□□□□□ -2.08
PCDH12Q9NPG4 RNU6-740P-201ENST00000364734 105 ntBASIC2.05□□□□□ -2.08
PCDH12Q9NPG4 RN7SKP51-201ENST00000410781 304 ntBASIC2.05□□□□□ -2.08
PCDH12Q9NPG4 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.05□□□□□ -2.08
PCDH12Q9NPG4 RPL39P38-201ENST00000467018 153 ntBASIC2.05□□□□□ -2.08
PCDH12Q9NPG4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.05□□□□□ -2.08
PCDH12Q9NPG4 CBX3P4-201ENST00000538909 354 ntBASIC2.05□□□□□ -2.08
PCDH12Q9NPG4 MIR4285-201ENST00000581001 85 ntBASIC2.05□□□□□ -2.08
PCDH12Q9NPG4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PCDH12Q9NPG4 Y_RNA.82-201ENST00000363000 102 ntBASIC2.04□□□□□ -2.08
PCDH12Q9NPG4 Y_RNA.92-201ENST00000363043 102 ntBASIC2.04□□□□□ -2.08
PCDH12Q9NPG4 Y_RNA.235-201ENST00000364412 102 ntBASIC2.04□□□□□ -2.08
PCDH12Q9NPG4 Y_RNA.306-201ENST00000365015 102 ntBASIC2.04□□□□□ -2.08
PCDH12Q9NPG4 Y_RNA.312-201ENST00000365089 102 ntBASIC2.04□□□□□ -2.08
PCDH12Q9NPG4 Y_RNA.322-201ENST00000365151 102 ntBASIC2.04□□□□□ -2.08
PCDH12Q9NPG4 RNU6-969P-201ENST00000383900 105 ntBASIC2.04□□□□□ -2.08
PCDH12Q9NPG4 RNU6-211P-201ENST00000384047 107 ntBASIC2.04□□□□□ -2.08
PCDH12Q9NPG4 MIR452-201ENST00000385020 85 ntBASIC2.04□□□□□ -2.08
PCDH12Q9NPG4 MIR568-201ENST00000385036 95 ntBASIC2.04□□□□□ -2.08
PCDH12Q9NPG4 RNA5SP496-201ENST00000391240 109 ntBASIC2.04□□□□□ -2.08
PCDH12Q9NPG4 AC027119.1-201ENST00000440877 241 ntBASIC2.04□□□□□ -2.08
PCDH12Q9NPG4 Y_RNA.650-201ENST00000459002 102 ntBASIC2.04□□□□□ -2.08
PCDH12Q9NPG4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
PCDH12Q9NPG4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.04□□□□□ -2.08
PCDH12Q9NPG4 AC114811.1-201ENST00000507207 168 ntBASIC2.04□□□□□ -2.08
PCDH12Q9NPG4 Y_RNA.777-201ENST00000516982 102 ntBASIC2.04□□□□□ -2.08
PCDH12Q9NPG4 RPL23AP91-201ENST00000569211 455 ntBASIC2.04□□□□□ -2.08
PCDH12Q9NPG4 Y_RNA.771-201ENST00000598668 102 ntBASIC2.04□□□□□ -2.08
PCDH12Q9NPG4 AL008718.3-201ENST00000610217 321 ntBASIC2.04□□□□□ -2.08
PCDH12Q9NPG4 uc_338.20-201ENST00000621563 178 ntBASIC2.04□□□□□ -2.08
PCDH12Q9NPG4 Y_RNA.789-201ENST00000622480 102 ntBASIC2.04□□□□□ -2.08
PCDH12Q9NPG4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
PCDH12Q9NPG4 SNORD14E-201ENST00000364009 85 ntBASIC2.03□□□□□ -2.08
PCDH12Q9NPG4 Y_RNA.796-201ENST00000364268 102 ntBASIC2.03□□□□□ -2.08
PCDH12Q9NPG4 RNU6-702P-201ENST00000364982 107 ntBASIC2.03□□□□□ -2.08
PCDH12Q9NPG4 Y_RNA.799-201ENST00000364992 102 ntBASIC2.03□□□□□ -2.08
PCDH12Q9NPG4 PIGPP3-201ENST00000425307 415 ntBASIC2.03□□□□□ -2.08
PCDH12Q9NPG4 RNU6-1132P-201ENST00000459214 107 ntBASIC2.03□□□□□ -2.08
PCDH12Q9NPG4 SNORD45.4-201ENST00000516629 73 ntBASIC2.03□□□□□ -2.08
PCDH12Q9NPG4 RNU1-40P-201ENST00000516816 164 ntBASIC2.03□□□□□ -2.08
PCDH12Q9NPG4 RNU1-97P-201ENST00000516872 164 ntBASIC2.03□□□□□ -2.08
PCDH12Q9NPG4 AC012433.1-201ENST00000588916 398 ntBASIC2.03□□□□□ -2.08
PCDH12Q9NPG4 AC006006.1-201ENST00000603082 144 ntBASIC2.03□□□□□ -2.08
PCDH12Q9NPG4 Y_RNA.802-201ENST00000614892 130 ntBASIC2.03□□□□□ -2.08
PCDH12Q9NPG4 7SK.10-201ENST00000621414 298 ntBASIC2.03□□□□□ -2.08
PCDH12Q9NPG4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
PCDH12Q9NPG4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
PCDH12Q9NPG4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.02□□□□□ -2.09
PCDH12Q9NPG4 Y_RNA.193-201ENST00000363979 102 ntBASIC2.02□□□□□ -2.09
PCDH12Q9NPG4 Y_RNA.336-201ENST00000365307 109 ntBASIC2.02□□□□□ -2.09
PCDH12Q9NPG4 SNORA2.2-201ENST00000365473 135 ntBASIC2.02□□□□□ -2.09
PCDH12Q9NPG4 RNU6-463P-201ENST00000384340 107 ntBASIC2.02□□□□□ -2.09
PCDH12Q9NPG4 MIR526A2-201ENST00000390198 65 ntBASIC2.02□□□□□ -2.09
PCDH12Q9NPG4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.02□□□□□ -2.09
PCDH12Q9NPG4 RNU2-38P-201ENST00000410856 79 ntBASIC2.02□□□□□ -2.09
PCDH12Q9NPG4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.02□□□□□ -2.09
PCDH12Q9NPG4 AC019176.1-201ENST00000518519 225 ntBASIC2.02□□□□□ -2.09
PCDH12Q9NPG4 AL513534.2-201ENST00000603836 250 ntBASIC2.02□□□□□ -2.09
PCDH12Q9NPG4 BX284668.6-201ENST00000606899 438 ntBASIC2.02□□□□□ -2.09
PCDH12Q9NPG4 AC106754.2-201ENST00000623006 233 ntBASIC2.02□□□□□ -2.09
PCDH12Q9NPG4 Y_RNA.54-201ENST00000362766 105 ntBASIC2.01□□□□□ -2.09
PCDH12Q9NPG4 Y_RNA.117-201ENST00000363294 101 ntBASIC2.01□□□□□ -2.09
PCDH12Q9NPG4 RNA5SP160-201ENST00000364866 120 ntBASIC2.01□□□□□ -2.09
PCDH12Q9NPG4 Y_RNA.452-201ENST00000384202 108 ntBASIC2.01□□□□□ -2.09
PCDH12Q9NPG4 SNORA8.3-201ENST00000384679 139 ntBASIC2.01□□□□□ -2.09
PCDH12Q9NPG4 AL021397.1-201ENST00000451806 248 ntBASIC2.01□□□□□ -2.09
PCDH12Q9NPG4 AC093850.1-201ENST00000454121 251 ntBASIC2.01□□□□□ -2.09
PCDH12Q9NPG4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.01□□□□□ -2.09
PCDH12Q9NPG4 Y_RNA.668-201ENST00000516233 93 ntBASIC2.01□□□□□ -2.09
PCDH12Q9NPG4 RNU6-902P-201ENST00000517212 91 ntBASIC2.01□□□□□ -2.09
PCDH12Q9NPG4 RNU6-1116P-201ENST00000517269 99 ntBASIC2.01□□□□□ -2.09
PCDH12Q9NPG4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.01□□□□□ -2.09
PCDH12Q9NPG4 AL365434.2-201ENST00000607979 234 ntBASIC2.01□□□□□ -2.09
PCDH12Q9NPG4 AC062037.2-201ENST00000610137 73 ntBASIC2.01□□□□□ -2.09
PCDH12Q9NPG4 AL121890.5-201ENST00000620848 304 ntBASIC2.01□□□□□ -2.09
PCDH12Q9NPG4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
PCDH12Q9NPG4 Y_RNA.144-201ENST00000363521 113 ntBASIC2□□□□□ -2.09
PCDH12Q9NPG4 Y_RNA.478-201ENST00000384358 107 ntBASIC2□□□□□ -2.09
PCDH12Q9NPG4 MIR504-201ENST00000385065 83 ntBASIC2□□□□□ -2.09
PCDH12Q9NPG4 AL451046.2-201ENST00000403074 277 ntBASIC2□□□□□ -2.09
PCDH12Q9NPG4 AL603910.2-201ENST00000407268 136 ntBASIC2□□□□□ -2.09
PCDH12Q9NPG4 MIR1289-2-201ENST00000408360 111 ntBASIC2□□□□□ -2.09
PCDH12Q9NPG4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2□□□□□ -2.09
PCDH12Q9NPG4 RPL30P7-201ENST00000479312 323 ntBASIC2□□□□□ -2.09
PCDH12Q9NPG4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2□□□□□ -2.09
PCDH12Q9NPG4 AC090049.2-201ENST00000550377 109 ntBASIC2□□□□□ -2.09
PCDH12Q9NPG4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2□□□□□ -2.09
PCDH12Q9NPG4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
PCDH12Q9NPG4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
PCDH12Q9NPG4 Y_RNA.562-201ENST00000384695 113 ntBASIC1.99□□□□□ -2.09
PCDH12Q9NPG4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.99□□□□□ -2.09
PCDH12Q9NPG4 SNORD2.1-201ENST00000458762 69 ntBASIC1.99□□□□□ -2.09
PCDH12Q9NPG4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.99□□□□□ -2.09
PCDH12Q9NPG4 MIR5089-201ENST00000580047 84 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 181.8 ms