Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.51□□□□□ -2.33
EXOSC4Q9NPD3 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
EXOSC4Q9NPD3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
EXOSC4Q9NPD3 AC022616.4-201ENST00000522985 181 ntBASIC0.51□□□□□ -2.33
EXOSC4Q9NPD3 AC004812.1-201ENST00000540773 146 ntBASIC0.51□□□□□ -2.33
EXOSC4Q9NPD3 AC006600.1-201ENST00000572529 153 ntBASIC0.51□□□□□ -2.33
EXOSC4Q9NPD3 MIR548AR-201ENST00000582191 57 ntBASIC0.51□□□□□ -2.33
EXOSC4Q9NPD3 SNORD116-29-201ENST00000384516 83 ntBASIC0.5□□□□□ -2.33
EXOSC4Q9NPD3 MIR520E-201ENST00000384867 87 ntBASIC0.5□□□□□ -2.33
EXOSC4Q9NPD3 MIR1276-201ENST00000408707 83 ntBASIC0.5□□□□□ -2.33
EXOSC4Q9NPD3 MIR1302-7-201ENST00000408841 72 ntBASIC0.5□□□□□ -2.33
EXOSC4Q9NPD3 RNA5SP95-201ENST00000410319 137 ntBASIC0.5□□□□□ -2.33
EXOSC4Q9NPD3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.5□□□□□ -2.33
EXOSC4Q9NPD3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.5□□□□□ -2.33
EXOSC4Q9NPD3 RN7SKP295-201ENST00000517264 153 ntBASIC0.5□□□□□ -2.33
EXOSC4Q9NPD3 AC036111.3-201ENST00000526389 112 ntBASIC0.5□□□□□ -2.33
EXOSC4Q9NPD3 AC012433.1-201ENST00000588916 398 ntBASIC0.5□□□□□ -2.33
EXOSC4Q9NPD3 POLR3GP1-201ENST00000594073 261 ntBASIC0.5□□□□□ -2.33
EXOSC4Q9NPD3 DEFB117-201ENST00000602356 141 ntBASIC0.5□□□□□ -2.33
EXOSC4Q9NPD3 AC134026.1-201ENST00000623249 2239 ntBASIC0.5□□□□□ -2.33
EXOSC4Q9NPD3 Y_RNA.27-201ENST00000362540 103 ntBASIC0.49□□□□□ -2.33
EXOSC4Q9NPD3 RNU6-490P-201ENST00000362985 107 ntBASIC0.49□□□□□ -2.33
EXOSC4Q9NPD3 SNORD81.1-201ENST00000363064 77 ntBASIC0.49□□□□□ -2.33
EXOSC4Q9NPD3 U8.7-201ENST00000364940 136 ntBASIC0.49□□□□□ -2.33
EXOSC4Q9NPD3 Y_RNA.310-201ENST00000365063 113 ntBASIC0.49□□□□□ -2.33
EXOSC4Q9NPD3 Y_RNA.341-201ENST00000365341 102 ntBASIC0.49□□□□□ -2.33
EXOSC4Q9NPD3 Y_RNA.570-201ENST00000384750 101 ntBASIC0.49□□□□□ -2.33
EXOSC4Q9NPD3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.49□□□□□ -2.33
EXOSC4Q9NPD3 AC091951.2-201ENST00000500762 203 ntBASIC0.49□□□□□ -2.33
EXOSC4Q9NPD3 RNU7-43P-201ENST00000516554 64 ntBASIC0.49□□□□□ -2.33
EXOSC4Q9NPD3 MIR3145-201ENST00000580727 82 ntBASIC0.49□□□□□ -2.33
EXOSC4Q9NPD3 AL355073.2-201ENST00000612106 557 ntBASIC0.49□□□□□ -2.33
EXOSC4Q9NPD3 AC025253.1-201ENST00000613623 543 ntBASIC0.49□□□□□ -2.33
EXOSC4Q9NPD3 MIR6516-201ENST00000630554 81 ntBASIC0.49□□□□□ -2.33
EXOSC4Q9NPD3 SNORD18A-201ENST00000363753 72 ntBASIC0.48□□□□□ -2.33
EXOSC4Q9NPD3 Y_RNA.230-201ENST00000364348 109 ntBASIC0.48□□□□□ -2.33
EXOSC4Q9NPD3 Y_RNA.259-201ENST00000364619 101 ntBASIC0.48□□□□□ -2.33
EXOSC4Q9NPD3 Y_RNA.390-201ENST00000383932 102 ntBASIC0.48□□□□□ -2.33
EXOSC4Q9NPD3 MIR1278-201ENST00000408753 81 ntBASIC0.48□□□□□ -2.33
EXOSC4Q9NPD3 AC098614.3-201ENST00000438957 440 ntBASIC0.48□□□□□ -2.33
EXOSC4Q9NPD3 AC099799.1-201ENST00000439809 192 ntBASIC0.48□□□□□ -2.33
EXOSC4Q9NPD3 AC098869.1-201ENST00000481627 292 ntBASIC0.48□□□□□ -2.33
EXOSC4Q9NPD3 AC113410.1-201ENST00000505029 247 ntBASIC0.48□□□□□ -2.33
EXOSC4Q9NPD3 RNU6-277P-201ENST00000516272 106 ntBASIC0.48□□□□□ -2.33
EXOSC4Q9NPD3 AC024405.2-202ENST00000532731 184 ntBASIC0.48□□□□□ -2.33
EXOSC4Q9NPD3 AC005730.3-201ENST00000583067 366 ntBASIC0.48□□□□□ -2.33
EXOSC4Q9NPD3 MIR6504-201ENST00000613520 61 ntBASIC0.48□□□□□ -2.33
EXOSC4Q9NPD3 AC084781.2-201ENST00000615568 161 ntBASIC0.48□□□□□ -2.33
EXOSC4Q9NPD3 MIR4251-201ENST00000635819 61 ntBASIC0.48□□□□□ -2.33
EXOSC4Q9NPD3 SNORD14E-201ENST00000364009 85 ntBASIC0.47□□□□□ -2.33
EXOSC4Q9NPD3 Y_RNA.331-201ENST00000365267 102 ntBASIC0.47□□□□□ -2.33
EXOSC4Q9NPD3 SNORD114-22-201ENST00000365423 72 ntBASIC0.47□□□□□ -2.33
EXOSC4Q9NPD3 RNU6-1323P-201ENST00000384025 107 ntBASIC0.47□□□□□ -2.33
EXOSC4Q9NPD3 RNU6-110P-201ENST00000384508 104 ntBASIC0.47□□□□□ -2.33
EXOSC4Q9NPD3 AC138393.2-201ENST00000414742 246 ntBASIC0.47□□□□□ -2.33
EXOSC4Q9NPD3 AF228730.4-201ENST00000421457 183 ntBASIC0.47□□□□□ -2.33
EXOSC4Q9NPD3 AL392103.1-201ENST00000447000 198 ntBASIC0.47□□□□□ -2.33
EXOSC4Q9NPD3 AC005042.3-201ENST00000453230 174 ntBASIC0.47□□□□□ -2.33
EXOSC4Q9NPD3 U7.7-201ENST00000459276 60 ntBASIC0.47□□□□□ -2.33
EXOSC4Q9NPD3 RPS29P1-201ENST00000465274 159 ntBASIC0.47□□□□□ -2.33
EXOSC4Q9NPD3 AC010655.3-201ENST00000478818 450 ntBASIC0.47□□□□□ -2.33
EXOSC4Q9NPD3 RPL23AP54-201ENST00000495129 419 ntBASIC0.47□□□□□ -2.33
EXOSC4Q9NPD3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.47□□□□□ -2.33
EXOSC4Q9NPD3 RNU4-54P-201ENST00000516428 129 ntBASIC0.47□□□□□ -2.33
EXOSC4Q9NPD3 RNU6-911P-201ENST00000516523 104 ntBASIC0.47□□□□□ -2.33
EXOSC4Q9NPD3 Y_RNA.718-201ENST00000517110 102 ntBASIC0.47□□□□□ -2.33
EXOSC4Q9NPD3 AC093027.1-201ENST00000546698 429 ntBASIC0.47□□□□□ -2.33
EXOSC4Q9NPD3 VN1R91P-201ENST00000594377 169 ntBASIC0.47□□□□□ -2.33
EXOSC4Q9NPD3 RBM11P1-201ENST00000604951 799 ntBASIC0.47□□□□□ -2.33
EXOSC4Q9NPD3 AC104985.2-201ENST00000620598 500 ntBASIC0.47□□□□□ -2.33
EXOSC4Q9NPD3 AC008133.2-201ENST00000624540 351 ntBASIC0.47□□□□□ -2.33
EXOSC4Q9NPD3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.47□□□□□ -2.33
EXOSC4Q9NPD3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
EXOSC4Q9NPD3 AC068700.1-201ENST00000565862 3754 ntBASIC0.47□□□□□ -2.33
EXOSC4Q9NPD3 Y_RNA.80-201ENST00000362996 102 ntBASIC0.46□□□□□ -2.34
EXOSC4Q9NPD3 Y_RNA.142-201ENST00000363491 102 ntBASIC0.46□□□□□ -2.34
EXOSC4Q9NPD3 RNU6-1209P-201ENST00000363655 107 ntBASIC0.46□□□□□ -2.34
EXOSC4Q9NPD3 RNA5SP48-201ENST00000363969 126 ntBASIC0.46□□□□□ -2.34
EXOSC4Q9NPD3 Y_RNA.191-201ENST00000363972 113 ntBASIC0.46□□□□□ -2.34
EXOSC4Q9NPD3 Y_RNA.203-201ENST00000364106 102 ntBASIC0.46□□□□□ -2.34
EXOSC4Q9NPD3 Y_RNA.387-201ENST00000383918 102 ntBASIC0.46□□□□□ -2.34
EXOSC4Q9NPD3 Y_RNA.463-201ENST00000384271 102 ntBASIC0.46□□□□□ -2.34
EXOSC4Q9NPD3 Y_RNA.485-201ENST00000384395 102 ntBASIC0.46□□□□□ -2.34
EXOSC4Q9NPD3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
EXOSC4Q9NPD3 RNY4P36-201ENST00000391116 96 ntBASIC0.46□□□□□ -2.34
EXOSC4Q9NPD3 RNU4-30P-201ENST00000410245 143 ntBASIC0.46□□□□□ -2.34
EXOSC4Q9NPD3 RNU6-994P-201ENST00000410507 111 ntBASIC0.46□□□□□ -2.34
EXOSC4Q9NPD3 MTND1P14-201ENST00000427400 950 ntBASIC0.46□□□□□ -2.34
EXOSC4Q9NPD3 HMGN2P32-201ENST00000444648 269 ntBASIC0.46□□□□□ -2.34
EXOSC4Q9NPD3 NDUFA4P2-201ENST00000489989 244 ntBASIC0.46□□□□□ -2.34
EXOSC4Q9NPD3 SNORA20.3-201ENST00000516880 132 ntBASIC0.46□□□□□ -2.34
EXOSC4Q9NPD3 Y_RNA.714-201ENST00000517065 90 ntBASIC0.46□□□□□ -2.34
EXOSC4Q9NPD3 MIR8070-201ENST00000616510 88 ntBASIC0.46□□□□□ -2.34
EXOSC4Q9NPD3 MIR4272-201ENST00000635924 64 ntBASIC0.46□□□□□ -2.34
EXOSC4Q9NPD3 RNU6-1048P-201ENST00000364054 107 ntBASIC0.45□□□□□ -2.34
EXOSC4Q9NPD3 RNU6-1040P-201ENST00000383974 107 ntBASIC0.45□□□□□ -2.34
EXOSC4Q9NPD3 Y_RNA.428-201ENST00000384078 102 ntBASIC0.45□□□□□ -2.34
EXOSC4Q9NPD3 Y_RNA.496-201ENST00000384444 101 ntBASIC0.45□□□□□ -2.34
EXOSC4Q9NPD3 SNORA2B-201ENST00000384583 137 ntBASIC0.45□□□□□ -2.34
EXOSC4Q9NPD3 MIR15B-201ENST00000385045 98 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms