Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 RNA5SP327-201ENST00000362494 101 ntBASIC1.09□□□□□ -2.23
RNF41Q9H4P4 Y_RNA.105-201ENST00000363182 111 ntBASIC1.09□□□□□ -2.23
RNF41Q9H4P4 Y_RNA.183-201ENST00000363882 113 ntBASIC1.09□□□□□ -2.23
RNF41Q9H4P4 Y_RNA.216-201ENST00000364205 93 ntBASIC1.09□□□□□ -2.23
RNF41Q9H4P4 Y_RNA.253-201ENST00000364562 112 ntBASIC1.09□□□□□ -2.23
RNF41Q9H4P4 Y_RNA.341-201ENST00000365341 102 ntBASIC1.09□□□□□ -2.23
RNF41Q9H4P4 SNORA63.7-201ENST00000365579 123 ntBASIC1.09□□□□□ -2.23
RNF41Q9H4P4 MIR526A1-201ENST00000384897 85 ntBASIC1.09□□□□□ -2.23
RNF41Q9H4P4 MIR522-201ENST00000385071 87 ntBASIC1.09□□□□□ -2.23
RNF41Q9H4P4 MIR1252-201ENST00000408861 65 ntBASIC1.09□□□□□ -2.23
RNF41Q9H4P4 RNU6-855P-201ENST00000410395 104 ntBASIC1.09□□□□□ -2.23
RNF41Q9H4P4 RNU6-897P-201ENST00000517135 105 ntBASIC1.09□□□□□ -2.23
RNF41Q9H4P4 MIR4300-201ENST00000581016 96 ntBASIC1.09□□□□□ -2.23
RNF41Q9H4P4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.09□□□□□ -2.23
RNF41Q9H4P4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.09□□□□□ -2.24
RNF41Q9H4P4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
RNF41Q9H4P4 RNU6-801P-201ENST00000364087 105 ntBASIC1.08□□□□□ -2.24
RNF41Q9H4P4 RNU6-450P-201ENST00000364654 107 ntBASIC1.08□□□□□ -2.24
RNF41Q9H4P4 U8.7-201ENST00000364940 136 ntBASIC1.08□□□□□ -2.24
RNF41Q9H4P4 SNORA2.2-201ENST00000365473 135 ntBASIC1.08□□□□□ -2.24
RNF41Q9H4P4 Y_RNA.383-201ENST00000383855 97 ntBASIC1.08□□□□□ -2.24
RNF41Q9H4P4 RNU6-102P-201ENST00000384485 104 ntBASIC1.08□□□□□ -2.24
RNF41Q9H4P4 RNU6-121P-201ENST00000410525 99 ntBASIC1.08□□□□□ -2.24
RNF41Q9H4P4 MTCYBP6-201ENST00000441810 138 ntBASIC1.08□□□□□ -2.24
RNF41Q9H4P4 AL133373.1-201ENST00000497098 94 ntBASIC1.08□□□□□ -2.24
RNF41Q9H4P4 AC114811.1-201ENST00000507207 168 ntBASIC1.08□□□□□ -2.24
RNF41Q9H4P4 SEPT14P8-201ENST00000508026 178 ntBASIC1.08□□□□□ -2.24
RNF41Q9H4P4 RNU6-922P-201ENST00000516753 99 ntBASIC1.08□□□□□ -2.24
RNF41Q9H4P4 MIR3171-201ENST00000584270 74 ntBASIC1.08□□□□□ -2.24
RNF41Q9H4P4 AP003357.1-201ENST00000604497 148 ntBASIC1.08□□□□□ -2.24
RNF41Q9H4P4 SNORD113-5-201ENST00000607261 78 ntBASIC1.08□□□□□ -2.24
RNF41Q9H4P4 MIR6504-201ENST00000613520 61 ntBASIC1.08□□□□□ -2.24
RNF41Q9H4P4 MIR6767-201ENST00000637302 66 ntBASIC1.08□□□□□ -2.24
RNF41Q9H4P4 AL442644.1-201ENST00000454390 3105 ntBASIC1.07□□□□□ -2.24
RNF41Q9H4P4 SNORD68-201ENST00000363214 84 ntBASIC1.07□□□□□ -2.24
RNF41Q9H4P4 SNORA25.9-201ENST00000365087 128 ntBASIC1.07□□□□□ -2.24
RNF41Q9H4P4 Y_RNA.418-201ENST00000384029 102 ntBASIC1.07□□□□□ -2.24
RNF41Q9H4P4 MIR548P-201ENST00000408336 84 ntBASIC1.07□□□□□ -2.24
RNF41Q9H4P4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.07□□□□□ -2.24
RNF41Q9H4P4 HSPE1P25-201ENST00000455484 251 ntBASIC1.07□□□□□ -2.24
RNF41Q9H4P4 CYCTP-201ENST00000504253 315 ntBASIC1.07□□□□□ -2.24
RNF41Q9H4P4 RNU6-496P-201ENST00000516145 99 ntBASIC1.07□□□□□ -2.24
RNF41Q9H4P4 Y_RNA.676-201ENST00000516393 96 ntBASIC1.07□□□□□ -2.24
RNF41Q9H4P4 RN7SKP88-201ENST00000516847 250 ntBASIC1.07□□□□□ -2.24
RNF41Q9H4P4 RNU6-1137P-201ENST00000517073 99 ntBASIC1.07□□□□□ -2.24
RNF41Q9H4P4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.07□□□□□ -2.24
RNF41Q9H4P4 RNU6-988P-201ENST00000519081 107 ntBASIC1.07□□□□□ -2.24
RNF41Q9H4P4 AC120024.3-201ENST00000603167 156 ntBASIC1.07□□□□□ -2.24
RNF41Q9H4P4 GHRLOS.1-201ENST00000610995 70 ntBASIC1.07□□□□□ -2.24
RNF41Q9H4P4 7SK.8-201ENST00000612110 250 ntBASIC1.07□□□□□ -2.24
RNF41Q9H4P4 7SK.11-201ENST00000615477 250 ntBASIC1.07□□□□□ -2.24
RNF41Q9H4P4 7SK.13-201ENST00000622040 250 ntBASIC1.07□□□□□ -2.24
RNF41Q9H4P4 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.07□□□□□ -2.24
RNF41Q9H4P4 AC068647.2-201ENST00000637380 353 ntBASIC1.07□□□□□ -2.24
RNF41Q9H4P4 SNORD113-8-201ENST00000363497 74 ntBASIC1.06□□□□□ -2.24
RNF41Q9H4P4 Y_RNA.158-201ENST00000363651 101 ntBASIC1.06□□□□□ -2.24
RNF41Q9H4P4 Y_RNA.214-201ENST00000364201 112 ntBASIC1.06□□□□□ -2.24
RNF41Q9H4P4 RNU1-93P-201ENST00000364704 169 ntBASIC1.06□□□□□ -2.24
RNF41Q9H4P4 SNORA25.8-201ENST00000364831 128 ntBASIC1.06□□□□□ -2.24
RNF41Q9H4P4 RNU6-1105P-201ENST00000384774 107 ntBASIC1.06□□□□□ -2.24
RNF41Q9H4P4 MIR618-201ENST00000385287 98 ntBASIC1.06□□□□□ -2.24
RNF41Q9H4P4 MIR891A-201ENST00000401237 79 ntBASIC1.06□□□□□ -2.24
RNF41Q9H4P4 RNU2-14P-201ENST00000411053 191 ntBASIC1.06□□□□□ -2.24
RNF41Q9H4P4 Y_RNA.621-201ENST00000411065 96 ntBASIC1.06□□□□□ -2.24
RNF41Q9H4P4 RNU6-1054P-201ENST00000411293 104 ntBASIC1.06□□□□□ -2.24
RNF41Q9H4P4 MRPL35P3-201ENST00000421557 364 ntBASIC1.06□□□□□ -2.24
RNF41Q9H4P4 PIGPP3-201ENST00000425307 415 ntBASIC1.06□□□□□ -2.24
RNF41Q9H4P4 MTCO2P12-201ENST00000427426 682 ntBASIC1.06□□□□□ -2.24
RNF41Q9H4P4 AC104332.1-201ENST00000440471 797 ntBASIC1.06□□□□□ -2.24
RNF41Q9H4P4 RNU6-397P-201ENST00000516226 104 ntBASIC1.06□□□□□ -2.24
RNF41Q9H4P4 RNU7-115P-201ENST00000516433 55 ntBASIC1.06□□□□□ -2.24
RNF41Q9H4P4 AC136628.3-201ENST00000521868 290 ntBASIC1.06□□□□□ -2.24
RNF41Q9H4P4 AC024405.2-202ENST00000532731 184 ntBASIC1.06□□□□□ -2.24
RNF41Q9H4P4 POLR3GP1-201ENST00000594073 261 ntBASIC1.06□□□□□ -2.24
RNF41Q9H4P4 AC136443.5-201ENST00000603741 370 ntBASIC1.06□□□□□ -2.24
RNF41Q9H4P4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
RNF41Q9H4P4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
RNF41Q9H4P4 RNU4-80P-201ENST00000363200 141 ntBASIC1.05□□□□□ -2.24
RNF41Q9H4P4 Y_RNA.389-201ENST00000383924 113 ntBASIC1.05□□□□□ -2.24
RNF41Q9H4P4 RNU6-21P-201ENST00000384710 107 ntBASIC1.05□□□□□ -2.24
RNF41Q9H4P4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.05□□□□□ -2.24
RNF41Q9H4P4 ELOCP20-201ENST00000422460 345 ntBASIC1.05□□□□□ -2.24
RNF41Q9H4P4 snoU13.25-201ENST00000458945 104 ntBASIC1.05□□□□□ -2.24
RNF41Q9H4P4 RNU6-191P-201ENST00000516295 94 ntBASIC1.05□□□□□ -2.24
RNF41Q9H4P4 Y_RNA.701-201ENST00000516812 110 ntBASIC1.05□□□□□ -2.24
RNF41Q9H4P4 RNU7-116P-201ENST00000516940 62 ntBASIC1.05□□□□□ -2.24
RNF41Q9H4P4 Y_RNA.721-201ENST00000517207 102 ntBASIC1.05□□□□□ -2.24
RNF41Q9H4P4 MIR8065-201ENST00000620577 100 ntBASIC1.05□□□□□ -2.24
RNF41Q9H4P4 Y_RNA.136-201ENST00000363444 102 ntBASIC1.04□□□□□ -2.24
RNF41Q9H4P4 SNORD50B-201ENST00000364995 70 ntBASIC1.04□□□□□ -2.24
RNF41Q9H4P4 Y_RNA.380-201ENST00000365663 111 ntBASIC1.04□□□□□ -2.24
RNF41Q9H4P4 AC117470.1-201ENST00000381974 330 ntBASIC1.04□□□□□ -2.24
RNF41Q9H4P4 RNU6-969P-201ENST00000383900 105 ntBASIC1.04□□□□□ -2.24
RNF41Q9H4P4 SNORA22-201ENST00000383907 134 ntBASIC1.04□□□□□ -2.24
RNF41Q9H4P4 RNU6-163P-201ENST00000384396 106 ntBASIC1.04□□□□□ -2.24
RNF41Q9H4P4 SNORA22C-201ENST00000384614 134 ntBASIC1.04□□□□□ -2.24
RNF41Q9H4P4 MIR1298-201ENST00000408783 112 ntBASIC1.04□□□□□ -2.24
RNF41Q9H4P4 AC098869.1-201ENST00000481627 292 ntBASIC1.04□□□□□ -2.24
RNF41Q9H4P4 AC117454.1-201ENST00000491120 168 ntBASIC1.04□□□□□ -2.24
RNF41Q9H4P4 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms