Protein–RNA interactions for Protein: Q9H0W5

CCDC8, Coiled-coil domain-containing protein 8, humanhuman

Predicted RBP Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8Q9H0W5 RNU6-1048P-201ENST00000364054 107 ntBASIC2.22□□□□□ -2.05
CCDC8Q9H0W5 Y_RNA.203-201ENST00000364106 102 ntBASIC2.22□□□□□ -2.05
CCDC8Q9H0W5 Y_RNA.242-201ENST00000364473 110 ntBASIC2.22□□□□□ -2.05
CCDC8Q9H0W5 Y_RNA.304-201ENST00000365011 112 ntBASIC2.22□□□□□ -2.05
CCDC8Q9H0W5 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.22□□□□□ -2.05
CCDC8Q9H0W5 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC8Q9H0W5 Y_RNA.673-201ENST00000516306 88 ntBASIC2.22□□□□□ -2.05
CCDC8Q9H0W5 AC005357.1-201ENST00000588399 301 ntBASIC2.22□□□□□ -2.05
CCDC8Q9H0W5 MIR8081-201ENST00000611533 95 ntBASIC2.22□□□□□ -2.05
CCDC8Q9H0W5 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
CCDC8Q9H0W5 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.22□□□□□ -2.05
CCDC8Q9H0W5 SNORD27-201ENST00000363981 72 ntBASIC2.21□□□□□ -2.06
CCDC8Q9H0W5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CCDC8Q9H0W5 RNA5SP496-201ENST00000391240 109 ntBASIC2.21□□□□□ -2.06
CCDC8Q9H0W5 Y_RNA.621-201ENST00000411065 96 ntBASIC2.21□□□□□ -2.06
CCDC8Q9H0W5 HMGN1P7-201ENST00000491722 313 ntBASIC2.21□□□□□ -2.06
CCDC8Q9H0W5 Y_RNA.676-201ENST00000516393 96 ntBASIC2.21□□□□□ -2.06
CCDC8Q9H0W5 MIR4762-201ENST00000585261 75 ntBASIC2.21□□□□□ -2.06
CCDC8Q9H0W5 AC087685.1-201ENST00000587507 141 ntBASIC2.21□□□□□ -2.06
CCDC8Q9H0W5 Y_RNA.802-201ENST00000614892 130 ntBASIC2.21□□□□□ -2.06
CCDC8Q9H0W5 AC141273.2-201ENST00000618989 130 ntBASIC2.21□□□□□ -2.06
CCDC8Q9H0W5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
CCDC8Q9H0W5 AC134026.1-201ENST00000623249 2239 ntBASIC2.2□□□□□ -2.06
CCDC8Q9H0W5 RNU6-414P-201ENST00000363705 104 ntBASIC2.2□□□□□ -2.06
CCDC8Q9H0W5 U8.5-201ENST00000364528 136 ntBASIC2.2□□□□□ -2.06
CCDC8Q9H0W5 RNU6-969P-201ENST00000383900 105 ntBASIC2.2□□□□□ -2.06
CCDC8Q9H0W5 Y_RNA.539-201ENST00000384635 107 ntBASIC2.2□□□□□ -2.06
CCDC8Q9H0W5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
CCDC8Q9H0W5 RNA5SP489-201ENST00000410986 109 ntBASIC2.2□□□□□ -2.06
CCDC8Q9H0W5 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC8Q9H0W5 PGBD4P5-201ENST00000445958 426 ntBASIC2.2□□□□□ -2.06
CCDC8Q9H0W5 AC107393.1-201ENST00000512403 346 ntBASIC2.2□□□□□ -2.06
CCDC8Q9H0W5 MIR4643-201ENST00000577473 78 ntBASIC2.2□□□□□ -2.06
CCDC8Q9H0W5 MIR4724-201ENST00000579485 89 ntBASIC2.2□□□□□ -2.06
CCDC8Q9H0W5 MIR3935-201ENST00000583472 104 ntBASIC2.2□□□□□ -2.06
CCDC8Q9H0W5 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC8Q9H0W5 AL929325.1-201ENST00000603096 117 ntBASIC2.2□□□□□ -2.06
CCDC8Q9H0W5 AL513423.1-201ENST00000621695 132 ntBASIC2.2□□□□□ -2.06
CCDC8Q9H0W5 AC084768.2-201ENST00000622736 221 ntBASIC2.2□□□□□ -2.06
CCDC8Q9H0W5 Y_RNA.60-201ENST00000362831 98 ntBASIC2.19□□□□□ -2.06
CCDC8Q9H0W5 Y_RNA.292-201ENST00000364904 97 ntBASIC2.19□□□□□ -2.06
CCDC8Q9H0W5 SNORA4.2-201ENST00000365313 147 ntBASIC2.19□□□□□ -2.06
CCDC8Q9H0W5 Y_RNA.477-201ENST00000384352 108 ntBASIC2.19□□□□□ -2.06
CCDC8Q9H0W5 Y_RNA.552-201ENST00000384665 112 ntBASIC2.19□□□□□ -2.06
CCDC8Q9H0W5 SNORA8.3-201ENST00000384679 139 ntBASIC2.19□□□□□ -2.06
CCDC8Q9H0W5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CCDC8Q9H0W5 RNU6-847P-201ENST00000411115 108 ntBASIC2.19□□□□□ -2.06
CCDC8Q9H0W5 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC8Q9H0W5 JTBP1-201ENST00000441314 247 ntBASIC2.19□□□□□ -2.06
CCDC8Q9H0W5 Y_RNA.680-201ENST00000516441 93 ntBASIC2.19□□□□□ -2.06
CCDC8Q9H0W5 MIR4419B-201ENST00000577260 68 ntBASIC2.19□□□□□ -2.06
CCDC8Q9H0W5 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
CCDC8Q9H0W5 MIR367-201ENST00000362299 68 ntBASIC2.18□□□□□ -2.06
CCDC8Q9H0W5 RNU6-1123P-201ENST00000362347 106 ntBASIC2.18□□□□□ -2.06
CCDC8Q9H0W5 Y_RNA.262-201ENST00000364641 102 ntBASIC2.18□□□□□ -2.06
CCDC8Q9H0W5 Y_RNA.293-201ENST00000364908 93 ntBASIC2.18□□□□□ -2.06
CCDC8Q9H0W5 RNY4P28-201ENST00000365281 93 ntBASIC2.18□□□□□ -2.06
CCDC8Q9H0W5 RNU6-1080P-201ENST00000383982 107 ntBASIC2.18□□□□□ -2.06
CCDC8Q9H0W5 SUMO2P12-201ENST00000405924 140 ntBASIC2.18□□□□□ -2.06
CCDC8Q9H0W5 AC023449.1-201ENST00000454464 154 ntBASIC2.18□□□□□ -2.06
CCDC8Q9H0W5 RNU7-34P-201ENST00000459394 64 ntBASIC2.18□□□□□ -2.06
CCDC8Q9H0W5 OR9P1P-201ENST00000496431 281 ntBASIC2.18□□□□□ -2.06
CCDC8Q9H0W5 AP000942.3-201ENST00000603702 160 ntBASIC2.18□□□□□ -2.06
CCDC8Q9H0W5 JPX_2.1-201ENST00000614161 69 ntBASIC2.18□□□□□ -2.06
CCDC8Q9H0W5 MIR8074-201ENST00000615081 81 ntBASIC2.18□□□□□ -2.06
CCDC8Q9H0W5 Y_RNA.76-201ENST00000362931 109 ntBASIC2.17□□□□□ -2.06
CCDC8Q9H0W5 RNU6-379P-201ENST00000363813 104 ntBASIC2.17□□□□□ -2.06
CCDC8Q9H0W5 Y_RNA.253-201ENST00000364562 112 ntBASIC2.17□□□□□ -2.06
CCDC8Q9H0W5 STAG3L5P-204ENST00000443759 179 ntBASIC2.17□□□□□ -2.06
CCDC8Q9H0W5 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC8Q9H0W5 RNU6-111P-201ENST00000517179 105 ntBASIC2.17□□□□□ -2.06
CCDC8Q9H0W5 Y_RNA.65-201ENST00000362846 100 ntBASIC2.16□□□□□ -2.06
CCDC8Q9H0W5 RNU4-41P-201ENST00000364426 143 ntBASIC2.16□□□□□ -2.06
CCDC8Q9H0W5 RNU6-338P-201ENST00000383888 105 ntBASIC2.16□□□□□ -2.06
CCDC8Q9H0W5 Y_RNA.515-201ENST00000384535 112 ntBASIC2.16□□□□□ -2.06
CCDC8Q9H0W5 MIR626-201ENST00000385032 94 ntBASIC2.16□□□□□ -2.06
CCDC8Q9H0W5 Z98949.2-201ENST00000440996 144 ntBASIC2.16□□□□□ -2.06
CCDC8Q9H0W5 MIR514B-201ENST00000516774 80 ntBASIC2.16□□□□□ -2.06
CCDC8Q9H0W5 RNA5SP364-201ENST00000516938 78 ntBASIC2.16□□□□□ -2.06
CCDC8Q9H0W5 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC8Q9H0W5 MIR3198-2-201ENST00000577868 80 ntBASIC2.16□□□□□ -2.06
CCDC8Q9H0W5 AC011921.3-201ENST00000605540 361 ntBASIC2.16□□□□□ -2.06
CCDC8Q9H0W5 AC103810.8-201ENST00000607347 118 ntBASIC2.16□□□□□ -2.06
CCDC8Q9H0W5 AC021506.2-201ENST00000612354 169 ntBASIC2.16□□□□□ -2.06
CCDC8Q9H0W5 AL591926.4-201ENST00000616895 298 ntBASIC2.16□□□□□ -2.06
CCDC8Q9H0W5 AL365265.1-201ENST00000621045 234 ntBASIC2.16□□□□□ -2.06
CCDC8Q9H0W5 AC027279.3-201ENST00000625055 122 ntBASIC2.16□□□□□ -2.06
CCDC8Q9H0W5 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
CCDC8Q9H0W5 MIR424-201ENST00000362227 98 ntBASIC2.15□□□□□ -2.07
CCDC8Q9H0W5 Y_RNA.269-201ENST00000364685 89 ntBASIC2.15□□□□□ -2.07
CCDC8Q9H0W5 RNU6-651P-201ENST00000411040 105 ntBASIC2.15□□□□□ -2.07
CCDC8Q9H0W5 RN7SKP101-201ENST00000411376 320 ntBASIC2.15□□□□□ -2.07
CCDC8Q9H0W5 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.15□□□□□ -2.07
CCDC8Q9H0W5 HMGN2P19-201ENST00000425149 265 ntBASIC2.15□□□□□ -2.07
CCDC8Q9H0W5 AC100767.1-201ENST00000528178 123 ntBASIC2.15□□□□□ -2.07
CCDC8Q9H0W5 AC009779.6-201ENST00000603972 165 ntBASIC2.15□□□□□ -2.07
CCDC8Q9H0W5 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.15□□□□□ -2.07
CCDC8Q9H0W5 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CCDC8Q9H0W5 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC8Q9H0W5 MIR126-201ENST00000362291 85 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms