Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.49□□□□□ -2.49
TRIM4Q9C037 SNORA25.10-201ENST00000515926 124 ntBASIC-0.49□□□□□ -2.49
TRIM4Q9C037 MRPS36P3-201ENST00000519284 130 ntBASIC-0.49□□□□□ -2.49
TRIM4Q9C037 AC011921.3-201ENST00000605540 361 ntBASIC-0.49□□□□□ -2.49
TRIM4Q9C037 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.49□□□□□ -2.49
TRIM4Q9C037 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.49□□□□□ -2.49
TRIM4Q9C037 AC073534.2-201ENST00000620377 381 ntBASIC-0.49□□□□□ -2.49
TRIM4Q9C037 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.49□□□□□ -2.49
TRIM4Q9C037 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.5□□□□□ -2.49
TRIM4Q9C037 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.5□□□□□ -2.49
TRIM4Q9C037 MTCO1P20-201ENST00000425366 358 ntBASIC-0.5□□□□□ -2.49
TRIM4Q9C037 SNRPGP10-201ENST00000432323 225 ntBASIC-0.5□□□□□ -2.49
TRIM4Q9C037 UQCRBP2-201ENST00000447827 297 ntBASIC-0.5□□□□□ -2.49
TRIM4Q9C037 RNU7-62P-201ENST00000458856 62 ntBASIC-0.5□□□□□ -2.49
TRIM4Q9C037 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.5□□□□□ -2.49
TRIM4Q9C037 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.5□□□□□ -2.49
TRIM4Q9C037 RNU6-848P-201ENST00000515948 107 ntBASIC-0.5□□□□□ -2.49
TRIM4Q9C037 RNU4-49P-201ENST00000516080 140 ntBASIC-0.5□□□□□ -2.49
TRIM4Q9C037 RNU6-617P-201ENST00000516147 107 ntBASIC-0.5□□□□□ -2.49
TRIM4Q9C037 RNU6-473P-201ENST00000516164 107 ntBASIC-0.5□□□□□ -2.49
TRIM4Q9C037 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.5□□□□□ -2.49
TRIM4Q9C037 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.5□□□□□ -2.49
TRIM4Q9C037 Z94722.1-201ENST00000604328 474 ntBASIC-0.5□□□□□ -2.49
TRIM4Q9C037 AC006157.1-201ENST00000611750 366 ntBASIC-0.5□□□□□ -2.49
TRIM4Q9C037 uc_338.4-201ENST00000616635 176 ntBASIC-0.5□□□□□ -2.49
TRIM4Q9C037 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.5□□□□□ -2.49
TRIM4Q9C037 AC106754.1-201ENST00000562632 1513 ntBASIC-0.5□□□□□ -2.49
TRIM4Q9C037 SNORA72.1-201ENST00000363485 129 ntBASIC-0.51□□□□□ -2.49
TRIM4Q9C037 RNU6-480P-201ENST00000384332 107 ntBASIC-0.51□□□□□ -2.49
TRIM4Q9C037 MIR125B2-201ENST00000385128 89 ntBASIC-0.51□□□□□ -2.49
TRIM4Q9C037 MIR760-201ENST00000390220 80 ntBASIC-0.51□□□□□ -2.49
TRIM4Q9C037 MIR1207-201ENST00000408249 87 ntBASIC-0.51□□□□□ -2.49
TRIM4Q9C037 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.51□□□□□ -2.49
TRIM4Q9C037 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.51□□□□□ -2.49
TRIM4Q9C037 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.51□□□□□ -2.49
TRIM4Q9C037 SNORA18.4-201ENST00000516440 124 ntBASIC-0.51□□□□□ -2.49
TRIM4Q9C037 AC093023.1-201ENST00000547375 507 ntBASIC-0.51□□□□□ -2.49
TRIM4Q9C037 MIR3913-1-201ENST00000577744 102 ntBASIC-0.51□□□□□ -2.49
TRIM4Q9C037 MIR7107-201ENST00000611489 80 ntBASIC-0.51□□□□□ -2.49
TRIM4Q9C037 MIR499B-201ENST00000636498 73 ntBASIC-0.51□□□□□ -2.49
TRIM4Q9C037 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.51□□□□□ -2.49
TRIM4Q9C037 SNORD114-7-201ENST00000362520 77 ntBASIC-0.52□□□□□ -2.49
TRIM4Q9C037 Y_RNA.201-201ENST00000364052 96 ntBASIC-0.52□□□□□ -2.49
TRIM4Q9C037 RNU6-187P-201ENST00000384139 106 ntBASIC-0.52□□□□□ -2.49
TRIM4Q9C037 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.52□□□□□ -2.49
TRIM4Q9C037 RNU6-131P-201ENST00000391144 107 ntBASIC-0.52□□□□□ -2.49
TRIM4Q9C037 RNU6-1158P-201ENST00000391167 107 ntBASIC-0.52□□□□□ -2.49
TRIM4Q9C037 RNU6-735P-201ENST00000410612 107 ntBASIC-0.52□□□□□ -2.49
TRIM4Q9C037 MTCO2P27-201ENST00000420740 428 ntBASIC-0.52□□□□□ -2.49
TRIM4Q9C037 RNU7-165P-201ENST00000458864 60 ntBASIC-0.52□□□□□ -2.49
TRIM4Q9C037 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.52□□□□□ -2.49
TRIM4Q9C037 AC090616.2-202ENST00000584248 222 ntBASIC-0.52□□□□□ -2.49
TRIM4Q9C037 FTX_2.1-201ENST00000618816 94 ntBASIC-0.52□□□□□ -2.49
TRIM4Q9C037 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-0.52□□□□□ -2.49
TRIM4Q9C037 RNU6-454P-201ENST00000364292 107 ntBASIC-0.53□□□□□ -2.49
TRIM4Q9C037 RNU6-38P-201ENST00000384085 107 ntBASIC-0.53□□□□□ -2.49
TRIM4Q9C037 RNA5SP163-201ENST00000410304 99 ntBASIC-0.53□□□□□ -2.49
TRIM4Q9C037 RNU6-284P-201ENST00000411105 106 ntBASIC-0.53□□□□□ -2.49
TRIM4Q9C037 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.53□□□□□ -2.49
TRIM4Q9C037 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.53□□□□□ -2.49
TRIM4Q9C037 AC087499.4-201ENST00000448505 178 ntBASIC-0.53□□□□□ -2.49
TRIM4Q9C037 PCMTD1P1-201ENST00000455560 355 ntBASIC-0.53□□□□□ -2.49
TRIM4Q9C037 AC114755.3-201ENST00000481111 251 ntBASIC-0.53□□□□□ -2.49
TRIM4Q9C037 AC026782.1-201ENST00000512952 449 ntBASIC-0.53□□□□□ -2.49
TRIM4Q9C037 RNU6-1114P-201ENST00000516022 107 ntBASIC-0.53□□□□□ -2.49
TRIM4Q9C037 RNU6-448P-201ENST00000517052 107 ntBASIC-0.53□□□□□ -2.49
TRIM4Q9C037 RNU7-156P-201ENST00000517214 74 ntBASIC-0.53□□□□□ -2.49
TRIM4Q9C037 SNORD92-201ENST00000585078 85 ntBASIC-0.53□□□□□ -2.49
TRIM4Q9C037 POLR3GP2-201ENST00000588366 668 ntBASIC-0.53□□□□□ -2.49
TRIM4Q9C037 MIR4791-201ENST00000607666 84 ntBASIC-0.53□□□□□ -2.49
TRIM4Q9C037 AP002371.2-201ENST00000624450 503 ntBASIC-0.53□□□□□ -2.49
TRIM4Q9C037 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.53□□□□□ -2.49
TRIM4Q9C037 MIR410-201ENST00000362222 80 ntBASIC-0.54□□□□□ -2.5
TRIM4Q9C037 RNU4-21P-201ENST00000362802 126 ntBASIC-0.54□□□□□ -2.5
TRIM4Q9C037 RNU4-66P-201ENST00000365199 138 ntBASIC-0.54□□□□□ -2.5
TRIM4Q9C037 SNORD38C-201ENST00000384381 69 ntBASIC-0.54□□□□□ -2.5
TRIM4Q9C037 SNORD37.1-201ENST00000390968 65 ntBASIC-0.54□□□□□ -2.5
TRIM4Q9C037 U8.17-201ENST00000391292 132 ntBASIC-0.54□□□□□ -2.5
TRIM4Q9C037 RNU4-30P-201ENST00000410245 143 ntBASIC-0.54□□□□□ -2.5
TRIM4Q9C037 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.54□□□□□ -2.5
TRIM4Q9C037 RNU7-175P-201ENST00000515915 61 ntBASIC-0.54□□□□□ -2.5
TRIM4Q9C037 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.54□□□□□ -2.5
TRIM4Q9C037 AC092807.2-201ENST00000609367 243 ntBASIC-0.54□□□□□ -2.5
TRIM4Q9C037 SNORD38B-202ENST00000625943 69 ntBASIC-0.54□□□□□ -2.5
TRIM4Q9C037 AC010332.2-201ENST00000613083 1904 ntBASIC-0.55□□□□□ -2.5
TRIM4Q9C037 SNORD115-24-201ENST00000363528 82 ntBASIC-0.55□□□□□ -2.5
TRIM4Q9C037 RNU4-28P-201ENST00000364739 141 ntBASIC-0.55□□□□□ -2.5
TRIM4Q9C037 SNORD14C-201ENST00000365382 88 ntBASIC-0.55□□□□□ -2.5
TRIM4Q9C037 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.55□□□□□ -2.5
TRIM4Q9C037 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.55□□□□□ -2.5
TRIM4Q9C037 RNA5SP300-201ENST00000391197 107 ntBASIC-0.55□□□□□ -2.5
TRIM4Q9C037 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.55□□□□□ -2.5
TRIM4Q9C037 AC090844.1-201ENST00000422019 156 ntBASIC-0.55□□□□□ -2.5
TRIM4Q9C037 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.55□□□□□ -2.5
TRIM4Q9C037 MTND3P23-201ENST00000431980 347 ntBASIC-0.55□□□□□ -2.5
TRIM4Q9C037 MIR4788-201ENST00000639104 80 ntBASIC-0.55□□□□□ -2.5
TRIM4Q9C037 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.56□□□□□ -2.5
TRIM4Q9C037 FGF7P2-201ENST00000332473 296 ntBASIC-0.56□□□□□ -2.5
TRIM4Q9C037 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.56□□□□□ -2.5
TRIM4Q9C037 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.56□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 180.7 ms