Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 PRELID3BP2-201ENST00000605362 201 ntBASIC0.85□□□□□ -2.27
CRNKL1Q9BZJ0 AC133104.2-201ENST00000615272 193 ntBASIC0.85□□□□□ -2.27
CRNKL1Q9BZJ0 AC104985.2-201ENST00000620598 500 ntBASIC0.85□□□□□ -2.27
CRNKL1Q9BZJ0 AC091925.1-201ENST00000623204 462 ntBASIC0.85□□□□□ -2.27
CRNKL1Q9BZJ0 Y_RNA.329-201ENST00000365209 107 ntBASIC0.84□□□□□ -2.27
CRNKL1Q9BZJ0 SNORA80D-201ENST00000384488 135 ntBASIC0.84□□□□□ -2.27
CRNKL1Q9BZJ0 MIR200A-201ENST00000384875 90 ntBASIC0.84□□□□□ -2.27
CRNKL1Q9BZJ0 MIR516B2-201ENST00000385190 85 ntBASIC0.84□□□□□ -2.27
CRNKL1Q9BZJ0 RNU2-64P-201ENST00000411315 191 ntBASIC0.84□□□□□ -2.27
CRNKL1Q9BZJ0 RNU7-21P-201ENST00000459430 62 ntBASIC0.84□□□□□ -2.27
CRNKL1Q9BZJ0 AL355375.2-201ENST00000574825 175 ntBASIC0.84□□□□□ -2.27
CRNKL1Q9BZJ0 UBE2V2P2-201ENST00000587677 504 ntBASIC0.84□□□□□ -2.27
CRNKL1Q9BZJ0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.84□□□□□ -2.27
CRNKL1Q9BZJ0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.84□□□□□ -2.27
CRNKL1Q9BZJ0 AC008163.1-202ENST00000636004 2889 ntBASIC0.84□□□□□ -2.28
CRNKL1Q9BZJ0 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CRNKL1Q9BZJ0 SNORA72.1-201ENST00000363485 129 ntBASIC0.83□□□□□ -2.28
CRNKL1Q9BZJ0 Y_RNA.230-201ENST00000364348 109 ntBASIC0.83□□□□□ -2.28
CRNKL1Q9BZJ0 RNU1-133P-201ENST00000364867 167 ntBASIC0.83□□□□□ -2.28
CRNKL1Q9BZJ0 RNU6-1175P-201ENST00000365200 107 ntBASIC0.83□□□□□ -2.28
CRNKL1Q9BZJ0 RNU6-1105P-201ENST00000384774 107 ntBASIC0.83□□□□□ -2.28
CRNKL1Q9BZJ0 MIR452-201ENST00000385020 85 ntBASIC0.83□□□□□ -2.28
CRNKL1Q9BZJ0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.83□□□□□ -2.28
CRNKL1Q9BZJ0 Y_RNA.632-201ENST00000459189 102 ntBASIC0.83□□□□□ -2.28
CRNKL1Q9BZJ0 AC117454.1-201ENST00000491120 168 ntBASIC0.83□□□□□ -2.28
CRNKL1Q9BZJ0 AC091951.2-201ENST00000500762 203 ntBASIC0.83□□□□□ -2.28
CRNKL1Q9BZJ0 RN7SKP295-201ENST00000517264 153 ntBASIC0.83□□□□□ -2.28
CRNKL1Q9BZJ0 AC090142.3-201ENST00000519012 385 ntBASIC0.83□□□□□ -2.28
CRNKL1Q9BZJ0 VN1R91P-201ENST00000594377 169 ntBASIC0.83□□□□□ -2.28
CRNKL1Q9BZJ0 SNORD81.1-201ENST00000363064 77 ntBASIC0.82□□□□□ -2.28
CRNKL1Q9BZJ0 Y_RNA.540-201ENST00000384638 111 ntBASIC0.82□□□□□ -2.28
CRNKL1Q9BZJ0 AL590004.1-201ENST00000405321 300 ntBASIC0.82□□□□□ -2.28
CRNKL1Q9BZJ0 MCFD2P1-201ENST00000417812 300 ntBASIC0.82□□□□□ -2.28
CRNKL1Q9BZJ0 PSMC1P5-201ENST00000512850 177 ntBASIC0.82□□□□□ -2.28
CRNKL1Q9BZJ0 RNU7-41P-201ENST00000515917 61 ntBASIC0.82□□□□□ -2.28
CRNKL1Q9BZJ0 RNU6-197P-201ENST00000516680 100 ntBASIC0.82□□□□□ -2.28
CRNKL1Q9BZJ0 AP003716.2-201ENST00000528260 108 ntBASIC0.82□□□□□ -2.28
CRNKL1Q9BZJ0 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.82□□□□□ -2.28
CRNKL1Q9BZJ0 AC093027.1-201ENST00000546698 429 ntBASIC0.82□□□□□ -2.28
CRNKL1Q9BZJ0 AL590095.2-201ENST00000604136 117 ntBASIC0.82□□□□□ -2.28
CRNKL1Q9BZJ0 AC005972.2-201ENST00000604690 348 ntBASIC0.82□□□□□ -2.28
CRNKL1Q9BZJ0 RBM11P1-201ENST00000604951 799 ntBASIC0.82□□□□□ -2.28
CRNKL1Q9BZJ0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CRNKL1Q9BZJ0 AC117470.1-201ENST00000381974 330 ntBASIC0.81□□□□□ -2.28
CRNKL1Q9BZJ0 SNORA72-201ENST00000384339 132 ntBASIC0.81□□□□□ -2.28
CRNKL1Q9BZJ0 SNORD19B-201ENST00000459623 84 ntBASIC0.81□□□□□ -2.28
CRNKL1Q9BZJ0 SNORD45.4-201ENST00000516629 73 ntBASIC0.81□□□□□ -2.28
CRNKL1Q9BZJ0 PVT1_3.1-201ENST00000620853 95 ntBASIC0.81□□□□□ -2.28
CRNKL1Q9BZJ0 Y_RNA.310-201ENST00000365063 113 ntBASIC0.8□□□□□ -2.28
CRNKL1Q9BZJ0 Y_RNA.384-201ENST00000383909 102 ntBASIC0.8□□□□□ -2.28
CRNKL1Q9BZJ0 MIR942-201ENST00000401111 86 ntBASIC0.8□□□□□ -2.28
CRNKL1Q9BZJ0 RNU6-855P-201ENST00000410395 104 ntBASIC0.8□□□□□ -2.28
CRNKL1Q9BZJ0 RPS3AP1-201ENST00000413190 320 ntBASIC0.8□□□□□ -2.28
CRNKL1Q9BZJ0 AL390729.2-201ENST00000416137 156 ntBASIC0.8□□□□□ -2.28
CRNKL1Q9BZJ0 MLLT10P1-201ENST00000418346 262 ntBASIC0.8□□□□□ -2.28
CRNKL1Q9BZJ0 AF228730.4-201ENST00000421457 183 ntBASIC0.8□□□□□ -2.28
CRNKL1Q9BZJ0 SNRPGP10-201ENST00000432323 225 ntBASIC0.8□□□□□ -2.28
CRNKL1Q9BZJ0 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.8□□□□□ -2.28
CRNKL1Q9BZJ0 AC010655.3-201ENST00000478818 450 ntBASIC0.8□□□□□ -2.28
CRNKL1Q9BZJ0 FGF7P4-201ENST00000509595 295 ntBASIC0.8□□□□□ -2.28
CRNKL1Q9BZJ0 RNU4-77P-201ENST00000516692 156 ntBASIC0.8□□□□□ -2.28
CRNKL1Q9BZJ0 SNORA74.3-201ENST00000517108 154 ntBASIC0.8□□□□□ -2.28
CRNKL1Q9BZJ0 AC022616.4-201ENST00000522985 181 ntBASIC0.8□□□□□ -2.28
CRNKL1Q9BZJ0 AC004812.1-201ENST00000540773 146 ntBASIC0.8□□□□□ -2.28
CRNKL1Q9BZJ0 MIR5188-201ENST00000583467 113 ntBASIC0.8□□□□□ -2.28
CRNKL1Q9BZJ0 MIR4653-201ENST00000585107 83 ntBASIC0.8□□□□□ -2.28
CRNKL1Q9BZJ0 DEFB117-201ENST00000602356 141 ntBASIC0.8□□□□□ -2.28
CRNKL1Q9BZJ0 SNORD58B-201ENST00000607313 66 ntBASIC0.8□□□□□ -2.28
CRNKL1Q9BZJ0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
CRNKL1Q9BZJ0 AC106800.4-201ENST00000614905 153 ntBASIC0.8□□□□□ -2.28
CRNKL1Q9BZJ0 AC010205.1-201ENST00000616668 449 ntBASIC0.8□□□□□ -2.28
CRNKL1Q9BZJ0 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.8□□□□□ -2.28
CRNKL1Q9BZJ0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
CRNKL1Q9BZJ0 SNORD50B-201ENST00000364995 70 ntBASIC0.79□□□□□ -2.28
CRNKL1Q9BZJ0 Y_RNA.428-201ENST00000384078 102 ntBASIC0.79□□□□□ -2.28
CRNKL1Q9BZJ0 Y_RNA.529-201ENST00000384586 119 ntBASIC0.79□□□□□ -2.28
CRNKL1Q9BZJ0 MIR608-201ENST00000384820 100 ntBASIC0.79□□□□□ -2.28
CRNKL1Q9BZJ0 MIR1185-1-201ENST00000408598 86 ntBASIC0.79□□□□□ -2.28
CRNKL1Q9BZJ0 AL606490.4-201ENST00000423117 127 ntBASIC0.79□□□□□ -2.28
CRNKL1Q9BZJ0 AC005042.3-201ENST00000453230 174 ntBASIC0.79□□□□□ -2.28
CRNKL1Q9BZJ0 RNU6-875P-201ENST00000516488 106 ntBASIC0.79□□□□□ -2.28
CRNKL1Q9BZJ0 SNORD116.3-201ENST00000517176 78 ntBASIC0.79□□□□□ -2.28
CRNKL1Q9BZJ0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.79□□□□□ -2.28
CRNKL1Q9BZJ0 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.79□□□□□ -2.28
CRNKL1Q9BZJ0 Y_RNA.5-201ENST00000362334 102 ntBASIC0.78□□□□□ -2.28
CRNKL1Q9BZJ0 Y_RNA.70-201ENST00000362886 110 ntBASIC0.78□□□□□ -2.28
CRNKL1Q9BZJ0 RNA5SP264-201ENST00000363115 107 ntBASIC0.78□□□□□ -2.28
CRNKL1Q9BZJ0 SNORA25.3-201ENST00000363205 127 ntBASIC0.78□□□□□ -2.28
CRNKL1Q9BZJ0 Y_RNA.187-201ENST00000363918 113 ntBASIC0.78□□□□□ -2.28
CRNKL1Q9BZJ0 Y_RNA.458-201ENST00000384240 102 ntBASIC0.78□□□□□ -2.28
CRNKL1Q9BZJ0 MIR100-201ENST00000385259 80 ntBASIC0.78□□□□□ -2.28
CRNKL1Q9BZJ0 AC006461.1-201ENST00000412637 326 ntBASIC0.78□□□□□ -2.28
CRNKL1Q9BZJ0 MTND1P14-201ENST00000427400 950 ntBASIC0.78□□□□□ -2.28
CRNKL1Q9BZJ0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.78□□□□□ -2.28
CRNKL1Q9BZJ0 Y_RNA.661-201ENST00000516003 99 ntBASIC0.78□□□□□ -2.28
CRNKL1Q9BZJ0 RNU6-507P-201ENST00000516045 100 ntBASIC0.78□□□□□ -2.28
CRNKL1Q9BZJ0 AC136628.3-201ENST00000521868 290 ntBASIC0.78□□□□□ -2.28
CRNKL1Q9BZJ0 AC092447.9-201ENST00000603395 144 ntBASIC0.78□□□□□ -2.28
CRNKL1Q9BZJ0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.29
CRNKL1Q9BZJ0 SNORD114-26-201ENST00000363543 72 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms