Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 Y_RNA.140-201ENST00000363474 103 ntBASIC0.79□□□□□ -2.28
HDHD3Q9BSH5 Y_RNA.418-201ENST00000384029 102 ntBASIC0.79□□□□□ -2.28
HDHD3Q9BSH5 RNU6-163P-201ENST00000384396 106 ntBASIC0.79□□□□□ -2.28
HDHD3Q9BSH5 RNU6-910P-201ENST00000390844 107 ntBASIC0.79□□□□□ -2.28
HDHD3Q9BSH5 SNORD115-46-201ENST00000390982 71 ntBASIC0.79□□□□□ -2.28
HDHD3Q9BSH5 SNORD12-201ENST00000391002 90 ntBASIC0.79□□□□□ -2.28
HDHD3Q9BSH5 RNU6-823P-201ENST00000391042 103 ntBASIC0.79□□□□□ -2.28
HDHD3Q9BSH5 RNU2-14P-201ENST00000411053 191 ntBASIC0.79□□□□□ -2.28
HDHD3Q9BSH5 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.79□□□□□ -2.28
HDHD3Q9BSH5 HSPE1P25-201ENST00000455484 251 ntBASIC0.79□□□□□ -2.28
HDHD3Q9BSH5 RNU6-1170P-201ENST00000515974 106 ntBASIC0.79□□□□□ -2.28
HDHD3Q9BSH5 RNU6-322P-201ENST00000516010 103 ntBASIC0.79□□□□□ -2.28
HDHD3Q9BSH5 RNU7-40P-201ENST00000516397 64 ntBASIC0.79□□□□□ -2.28
HDHD3Q9BSH5 SNORD45.4-201ENST00000516629 73 ntBASIC0.79□□□□□ -2.28
HDHD3Q9BSH5 RNU7-110P-201ENST00000516891 62 ntBASIC0.79□□□□□ -2.28
HDHD3Q9BSH5 Y_RNA.713-201ENST00000517013 96 ntBASIC0.79□□□□□ -2.28
HDHD3Q9BSH5 AC024405.2-202ENST00000532731 184 ntBASIC0.79□□□□□ -2.28
HDHD3Q9BSH5 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.79□□□□□ -2.28
HDHD3Q9BSH5 AC127455.1-201ENST00000565496 145 ntBASIC0.79□□□□□ -2.28
HDHD3Q9BSH5 MIR4300-201ENST00000581016 96 ntBASIC0.79□□□□□ -2.28
HDHD3Q9BSH5 AL357312.1-201ENST00000603879 298 ntBASIC0.79□□□□□ -2.28
HDHD3Q9BSH5 RAC1P9-201ENST00000604990 392 ntBASIC0.79□□□□□ -2.28
HDHD3Q9BSH5 AC090971.5-201ENST00000621102 293 ntBASIC0.79□□□□□ -2.28
HDHD3Q9BSH5 AL160413.1-201ENST00000622780 310 ntBASIC0.79□□□□□ -2.28
HDHD3Q9BSH5 AC068700.1-201ENST00000565862 3754 ntBASIC0.78□□□□□ -2.28
HDHD3Q9BSH5 AL391987.6-201ENST00000305671 199 ntBASIC0.78□□□□□ -2.28
HDHD3Q9BSH5 MIR378A-201ENST00000362177 66 ntBASIC0.78□□□□□ -2.28
HDHD3Q9BSH5 Y_RNA.28-201ENST00000362554 111 ntBASIC0.78□□□□□ -2.28
HDHD3Q9BSH5 Y_RNA.796-201ENST00000364268 102 ntBASIC0.78□□□□□ -2.28
HDHD3Q9BSH5 RNU6-867P-201ENST00000364956 107 ntBASIC0.78□□□□□ -2.28
HDHD3Q9BSH5 Y_RNA.799-201ENST00000364992 102 ntBASIC0.78□□□□□ -2.28
HDHD3Q9BSH5 Y_RNA.383-201ENST00000383855 97 ntBASIC0.78□□□□□ -2.28
HDHD3Q9BSH5 Y_RNA.431-201ENST00000384086 102 ntBASIC0.78□□□□□ -2.28
HDHD3Q9BSH5 RNU6-102P-201ENST00000384485 104 ntBASIC0.78□□□□□ -2.28
HDHD3Q9BSH5 MIR452-201ENST00000385020 85 ntBASIC0.78□□□□□ -2.28
HDHD3Q9BSH5 RNU6-121P-201ENST00000410525 99 ntBASIC0.78□□□□□ -2.28
HDHD3Q9BSH5 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.78□□□□□ -2.28
HDHD3Q9BSH5 AC002429.1-201ENST00000437672 148 ntBASIC0.78□□□□□ -2.28
HDHD3Q9BSH5 U8.19-201ENST00000459095 133 ntBASIC0.78□□□□□ -2.28
HDHD3Q9BSH5 NDUFA4P2-201ENST00000489989 244 ntBASIC0.78□□□□□ -2.28
HDHD3Q9BSH5 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.78□□□□□ -2.28
HDHD3Q9BSH5 RNU6-496P-201ENST00000516145 99 ntBASIC0.78□□□□□ -2.28
HDHD3Q9BSH5 RNU7-116P-201ENST00000516940 62 ntBASIC0.78□□□□□ -2.28
HDHD3Q9BSH5 Y_RNA.715-201ENST00000517082 110 ntBASIC0.78□□□□□ -2.28
HDHD3Q9BSH5 SNORA70.22-201ENST00000517160 124 ntBASIC0.78□□□□□ -2.28
HDHD3Q9BSH5 AC136628.3-201ENST00000521868 290 ntBASIC0.78□□□□□ -2.28
HDHD3Q9BSH5 POLR3GP1-201ENST00000594073 261 ntBASIC0.78□□□□□ -2.28
HDHD3Q9BSH5 AL391516.1-201ENST00000554380 2449 ntBASIC0.78□□□□□ -2.28
HDHD3Q9BSH5 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
HDHD3Q9BSH5 Y_RNA.61-201ENST00000362835 102 ntBASIC0.77□□□□□ -2.29
HDHD3Q9BSH5 RNU4-80P-201ENST00000363200 141 ntBASIC0.77□□□□□ -2.29
HDHD3Q9BSH5 Y_RNA.136-201ENST00000363444 102 ntBASIC0.77□□□□□ -2.29
HDHD3Q9BSH5 Y_RNA.203-201ENST00000364106 102 ntBASIC0.77□□□□□ -2.29
HDHD3Q9BSH5 RNU5E-4P-201ENST00000364931 120 ntBASIC0.77□□□□□ -2.29
HDHD3Q9BSH5 RNU6-53P-201ENST00000365367 106 ntBASIC0.77□□□□□ -2.29
HDHD3Q9BSH5 Y_RNA.535-201ENST00000384612 99 ntBASIC0.77□□□□□ -2.29
HDHD3Q9BSH5 SNORA26.5-201ENST00000391215 123 ntBASIC0.77□□□□□ -2.29
HDHD3Q9BSH5 Y_RNA.621-201ENST00000411065 96 ntBASIC0.77□□□□□ -2.29
HDHD3Q9BSH5 AC117454.1-201ENST00000491120 168 ntBASIC0.77□□□□□ -2.29
HDHD3Q9BSH5 SEPT14P8-201ENST00000508026 178 ntBASIC0.77□□□□□ -2.29
HDHD3Q9BSH5 SNORA31.4-201ENST00000516049 129 ntBASIC0.77□□□□□ -2.29
HDHD3Q9BSH5 SNORA74.3-201ENST00000517108 154 ntBASIC0.77□□□□□ -2.29
HDHD3Q9BSH5 SNORD113-5-201ENST00000607261 78 ntBASIC0.77□□□□□ -2.29
HDHD3Q9BSH5 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
HDHD3Q9BSH5 MIR548AY-201ENST00000617669 107 ntBASIC0.77□□□□□ -2.29
HDHD3Q9BSH5 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.77□□□□□ -2.29
HDHD3Q9BSH5 Y_RNA.138-201ENST00000363462 102 ntBASIC0.76□□□□□ -2.29
HDHD3Q9BSH5 RNU6-674P-201ENST00000363831 107 ntBASIC0.76□□□□□ -2.29
HDHD3Q9BSH5 Y_RNA.183-201ENST00000363882 113 ntBASIC0.76□□□□□ -2.29
HDHD3Q9BSH5 RNU6-1048P-201ENST00000364054 107 ntBASIC0.76□□□□□ -2.29
HDHD3Q9BSH5 SNORA63.7-201ENST00000365579 123 ntBASIC0.76□□□□□ -2.29
HDHD3Q9BSH5 Y_RNA.445-201ENST00000384168 102 ntBASIC0.76□□□□□ -2.29
HDHD3Q9BSH5 SNORA72.4-201ENST00000384174 132 ntBASIC0.76□□□□□ -2.29
HDHD3Q9BSH5 SNORA75.2-201ENST00000391138 150 ntBASIC0.76□□□□□ -2.29
HDHD3Q9BSH5 SNORA75.3-201ENST00000391231 150 ntBASIC0.76□□□□□ -2.29
HDHD3Q9BSH5 AC022028.1-201ENST00000412054 408 ntBASIC0.76□□□□□ -2.29
HDHD3Q9BSH5 AC245047.8-201ENST00000456455 284 ntBASIC0.76□□□□□ -2.29
HDHD3Q9BSH5 LINC01399-202ENST00000458450 244 ntBASIC0.76□□□□□ -2.29
HDHD3Q9BSH5 RNU7-141P-201ENST00000459304 62 ntBASIC0.76□□□□□ -2.29
HDHD3Q9BSH5 RNU7-21P-201ENST00000459430 62 ntBASIC0.76□□□□□ -2.29
HDHD3Q9BSH5 RNU6-191P-201ENST00000516295 94 ntBASIC0.76□□□□□ -2.29
HDHD3Q9BSH5 SNORD111.1-201ENST00000516421 86 ntBASIC0.76□□□□□ -2.29
HDHD3Q9BSH5 RNU6-897P-201ENST00000517135 105 ntBASIC0.76□□□□□ -2.29
HDHD3Q9BSH5 AL020996.3-201ENST00000606617 222 ntBASIC0.76□□□□□ -2.29
HDHD3Q9BSH5 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.76□□□□□ -2.29
HDHD3Q9BSH5 SNORD113-8-201ENST00000363497 74 ntBASIC0.75□□□□□ -2.29
HDHD3Q9BSH5 RNU6-1209P-201ENST00000363655 107 ntBASIC0.75□□□□□ -2.29
HDHD3Q9BSH5 MIR516B2-201ENST00000385190 85 ntBASIC0.75□□□□□ -2.29
HDHD3Q9BSH5 MIR1252-201ENST00000408861 65 ntBASIC0.75□□□□□ -2.29
HDHD3Q9BSH5 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.75□□□□□ -2.29
HDHD3Q9BSH5 Y_RNA.631-201ENST00000459607 101 ntBASIC0.75□□□□□ -2.29
HDHD3Q9BSH5 COX6CP14-201ENST00000469580 174 ntBASIC0.75□□□□□ -2.29
HDHD3Q9BSH5 RNU7-41P-201ENST00000515917 61 ntBASIC0.75□□□□□ -2.29
HDHD3Q9BSH5 RNU6-947P-201ENST00000516264 106 ntBASIC0.75□□□□□ -2.29
HDHD3Q9BSH5 RNU6-764P-201ENST00000516396 105 ntBASIC0.75□□□□□ -2.29
HDHD3Q9BSH5 Y_RNA.711-201ENST00000516993 102 ntBASIC0.75□□□□□ -2.29
HDHD3Q9BSH5 AC020661.2-201ENST00000560114 134 ntBASIC0.75□□□□□ -2.29
HDHD3Q9BSH5 AC136443.5-201ENST00000603741 370 ntBASIC0.75□□□□□ -2.29
HDHD3Q9BSH5 AC134503.1-201ENST00000633048 54 ntBASIC0.75□□□□□ -2.29
HDHD3Q9BSH5 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 182.7 ms