Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 AC026436.1-201ENST00000510537 270 ntBASIC2.16□□□□□ -2.06
TIMP4Q99727 RNU1-142P-201ENST00000516682 145 ntBASIC2.16□□□□□ -2.06
TIMP4Q99727 RNU7-128P-201ENST00000517247 62 ntBASIC2.16□□□□□ -2.06
TIMP4Q99727 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.16□□□□□ -2.06
TIMP4Q99727 AC067747.1-201ENST00000608026 250 ntBASIC2.16□□□□□ -2.06
TIMP4Q99727 MIR1291-201ENST00000627649 87 ntBASIC2.16□□□□□ -2.06
TIMP4Q99727 AC016717.2-201ENST00000609089 5141 ntBASIC2.15□□□□□ -2.06
TIMP4Q99727 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
TIMP4Q99727 Y_RNA.99-201ENST00000363138 105 ntBASIC2.15□□□□□ -2.07
TIMP4Q99727 Y_RNA.294-201ENST00000364916 102 ntBASIC2.15□□□□□ -2.07
TIMP4Q99727 SNORD50B-201ENST00000364995 70 ntBASIC2.15□□□□□ -2.07
TIMP4Q99727 RNU1-51P-201ENST00000365345 176 ntBASIC2.15□□□□□ -2.07
TIMP4Q99727 SNORD116-14-201ENST00000383894 92 ntBASIC2.15□□□□□ -2.07
TIMP4Q99727 SNORD116-17-201ENST00000383929 92 ntBASIC2.15□□□□□ -2.07
TIMP4Q99727 Y_RNA.486-201ENST00000384398 107 ntBASIC2.15□□□□□ -2.07
TIMP4Q99727 SNORD116-15-201ENST00000384445 92 ntBASIC2.15□□□□□ -2.07
TIMP4Q99727 SNORD116-19-201ENST00000384729 92 ntBASIC2.15□□□□□ -2.07
TIMP4Q99727 SNORA12.1-201ENST00000390873 148 ntBASIC2.15□□□□□ -2.07
TIMP4Q99727 SNORA3.2-201ENST00000408221 125 ntBASIC2.15□□□□□ -2.07
TIMP4Q99727 ATP5J2P3-201ENST00000451550 258 ntBASIC2.15□□□□□ -2.07
TIMP4Q99727 OR9P1P-201ENST00000496431 281 ntBASIC2.15□□□□□ -2.07
TIMP4Q99727 RNU4-57P-201ENST00000515980 135 ntBASIC2.15□□□□□ -2.07
TIMP4Q99727 SNORA31.11-201ENST00000516528 139 ntBASIC2.15□□□□□ -2.07
TIMP4Q99727 Y_RNA.686-201ENST00000516548 134 ntBASIC2.15□□□□□ -2.07
TIMP4Q99727 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.15□□□□□ -2.07
TIMP4Q99727 AC103810.6-201ENST00000606708 136 ntBASIC2.15□□□□□ -2.07
TIMP4Q99727 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.15□□□□□ -2.07
TIMP4Q99727 MIR6079-201ENST00000635807 62 ntBASIC2.15□□□□□ -2.07
TIMP4Q99727 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TIMP4Q99727 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.14□□□□□ -2.07
TIMP4Q99727 SNORD114-30-201ENST00000364448 72 ntBASIC2.14□□□□□ -2.07
TIMP4Q99727 RNA5SP205-201ENST00000364653 136 ntBASIC2.14□□□□□ -2.07
TIMP4Q99727 SNORA8-201ENST00000384574 139 ntBASIC2.14□□□□□ -2.07
TIMP4Q99727 RNU6-160P-201ENST00000384591 107 ntBASIC2.14□□□□□ -2.07
TIMP4Q99727 MIR562-201ENST00000384894 95 ntBASIC2.14□□□□□ -2.07
TIMP4Q99727 AL117342.1-201ENST00000404861 406 ntBASIC2.14□□□□□ -2.07
TIMP4Q99727 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.14□□□□□ -2.07
TIMP4Q99727 Z98742.3-201ENST00000418637 326 ntBASIC2.14□□□□□ -2.07
TIMP4Q99727 SNRPGP10-201ENST00000432323 225 ntBASIC2.14□□□□□ -2.07
TIMP4Q99727 RNA5SP153-201ENST00000516498 76 ntBASIC2.14□□□□□ -2.07
TIMP4Q99727 AC091178.2-201ENST00000584401 117 ntBASIC2.14□□□□□ -2.07
TIMP4Q99727 AP001340.1-201ENST00000624405 217 ntBASIC2.14□□□□□ -2.07
TIMP4Q99727 U6.108-201ENST00000637764 58 ntBASIC2.14□□□□□ -2.07
TIMP4Q99727 ZNF720P1-201ENST00000562403 1939 ntBASIC2.14□□□□□ -2.07
TIMP4Q99727 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.14□□□□□ -2.07
TIMP4Q99727 ZNF658B-202ENST00000615961 3375 ntBASIC2.13□□□□□ -2.07
TIMP4Q99727 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.13□□□□□ -2.07
TIMP4Q99727 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TIMP4Q99727 RNU6-862P-201ENST00000362804 105 ntBASIC2.13□□□□□ -2.07
TIMP4Q99727 U8.1-201ENST00000362843 134 ntBASIC2.13□□□□□ -2.07
TIMP4Q99727 Y_RNA.253-201ENST00000364562 112 ntBASIC2.13□□□□□ -2.07
TIMP4Q99727 RNU6-80P-201ENST00000384195 107 ntBASIC2.13□□□□□ -2.07
TIMP4Q99727 SNORA70B-201ENST00000384210 135 ntBASIC2.13□□□□□ -2.07
TIMP4Q99727 Y_RNA.525-201ENST00000384570 113 ntBASIC2.13□□□□□ -2.07
TIMP4Q99727 SNORA80E-201ENST00000384744 137 ntBASIC2.13□□□□□ -2.07
TIMP4Q99727 MIR144-201ENST00000384886 86 ntBASIC2.13□□□□□ -2.07
TIMP4Q99727 RN7SKP284-201ENST00000411002 343 ntBASIC2.13□□□□□ -2.07
TIMP4Q99727 AL353689.1-201ENST00000438895 199 ntBASIC2.13□□□□□ -2.07
TIMP4Q99727 NDUFA4P2-201ENST00000489989 244 ntBASIC2.13□□□□□ -2.07
TIMP4Q99727 HMGN1P7-201ENST00000491722 313 ntBASIC2.13□□□□□ -2.07
TIMP4Q99727 RNU1-41P-201ENST00000516161 162 ntBASIC2.13□□□□□ -2.07
TIMP4Q99727 RNU1-48P-201ENST00000516400 162 ntBASIC2.13□□□□□ -2.07
TIMP4Q99727 RNA5SP281-201ENST00000516504 135 ntBASIC2.13□□□□□ -2.07
TIMP4Q99727 NDUFA5P6-201ENST00000542110 379 ntBASIC2.13□□□□□ -2.07
TIMP4Q99727 U7.2-201ENST00000607576 63 ntBASIC2.13□□□□□ -2.07
TIMP4Q99727 AC245884.12-201ENST00000615364 59 ntBASIC2.13□□□□□ -2.07
TIMP4Q99727 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.13□□□□□ -2.07
TIMP4Q99727 ICE2P2-201ENST00000483823 2787 ntBASIC2.13□□□□□ -2.07
TIMP4Q99727 AC018630.2-201ENST00000534866 2403 ntBASIC2.12□□□□□ -2.07
TIMP4Q99727 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
TIMP4Q99727 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TIMP4Q99727 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
TIMP4Q99727 AC005336.3-201ENST00000623833 2679 ntBASIC2.12□□□□□ -2.07
TIMP4Q99727 RNU6-235P-201ENST00000362644 107 ntBASIC2.12□□□□□ -2.07
TIMP4Q99727 RNA5SP493-201ENST00000364115 91 ntBASIC2.12□□□□□ -2.07
TIMP4Q99727 SNORD20-201ENST00000384550 80 ntBASIC2.12□□□□□ -2.07
TIMP4Q99727 RNU11-5P-201ENST00000391216 129 ntBASIC2.12□□□□□ -2.07
TIMP4Q99727 Y_RNA.629-201ENST00000411368 105 ntBASIC2.12□□□□□ -2.07
TIMP4Q99727 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.12□□□□□ -2.07
TIMP4Q99727 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.12□□□□□ -2.07
TIMP4Q99727 RNU7-107P-201ENST00000459121 61 ntBASIC2.12□□□□□ -2.07
TIMP4Q99727 RNU5E-3P-201ENST00000515913 68 ntBASIC2.12□□□□□ -2.07
TIMP4Q99727 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.12□□□□□ -2.07
TIMP4Q99727 AL160236.1-201ENST00000556317 195 ntBASIC2.12□□□□□ -2.07
TIMP4Q99727 AC022217.4-201ENST00000604389 163 ntBASIC2.12□□□□□ -2.07
TIMP4Q99727 AC022202.1-201ENST00000613515 211 ntBASIC2.12□□□□□ -2.07
TIMP4Q99727 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.12□□□□□ -2.07
TIMP4Q99727 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.11□□□□□ -2.07
TIMP4Q99727 MIR126-201ENST00000362291 85 ntBASIC2.11□□□□□ -2.07
TIMP4Q99727 SNORA26-201ENST00000391286 122 ntBASIC2.11□□□□□ -2.07
TIMP4Q99727 RNA5SP425-201ENST00000410336 112 ntBASIC2.11□□□□□ -2.07
TIMP4Q99727 AL356320.1-201ENST00000429616 163 ntBASIC2.11□□□□□ -2.07
TIMP4Q99727 RNU1-131P-201ENST00000458943 161 ntBASIC2.11□□□□□ -2.07
TIMP4Q99727 AL163195.1-201ENST00000496941 348 ntBASIC2.11□□□□□ -2.07
TIMP4Q99727 MRPS17P9-201ENST00000511924 393 ntBASIC2.11□□□□□ -2.07
TIMP4Q99727 RNU6-341P-201ENST00000516973 96 ntBASIC2.11□□□□□ -2.07
TIMP4Q99727 RNU6-365P-201ENST00000517113 106 ntBASIC2.11□□□□□ -2.07
TIMP4Q99727 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.11□□□□□ -2.07
TIMP4Q99727 AL449363.1-201ENST00000617815 186 ntBASIC2.11□□□□□ -2.07
TIMP4Q99727 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 258.2 ms