Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.02□□□□□ -2.41
VAT1Q99536 AL353997.1-201ENST00000432936 108 ntBASIC0.02□□□□□ -2.41
VAT1Q99536 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.02□□□□□ -2.41
VAT1Q99536 AC011352.1-201ENST00000512300 793 ntBASIC0.02□□□□□ -2.41
VAT1Q99536 AC026782.1-201ENST00000512952 449 ntBASIC0.02□□□□□ -2.41
VAT1Q99536 AP003327.1-201ENST00000529684 127 ntBASIC0.02□□□□□ -2.41
VAT1Q99536 AC245008.1-201ENST00000608123 476 ntBASIC0.02□□□□□ -2.41
VAT1Q99536 Y_RNA.2-201ENST00000362330 96 ntBASIC0.01□□□□□ -2.41
VAT1Q99536 RNU4-67P-201ENST00000364569 141 ntBASIC0.01□□□□□ -2.41
VAT1Q99536 Y_RNA.301-201ENST00000364990 103 ntBASIC0.01□□□□□ -2.41
VAT1Q99536 RNU6-815P-201ENST00000384080 113 ntBASIC0.01□□□□□ -2.41
VAT1Q99536 MIR613-201ENST00000385248 95 ntBASIC0.01□□□□□ -2.41
VAT1Q99536 AC074085.1-201ENST00000413598 418 ntBASIC0.01□□□□□ -2.41
VAT1Q99536 SNRPGP14-201ENST00000435400 219 ntBASIC0.01□□□□□ -2.41
VAT1Q99536 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.01□□□□□ -2.41
VAT1Q99536 AC092989.1-201ENST00000481235 277 ntBASIC0.01□□□□□ -2.41
VAT1Q99536 RNU6-863P-201ENST00000515989 104 ntBASIC0.01□□□□□ -2.41
VAT1Q99536 RNA5SP94-201ENST00000516917 108 ntBASIC0.01□□□□□ -2.41
VAT1Q99536 AC069113.3-201ENST00000521019 150 ntBASIC0.01□□□□□ -2.41
VAT1Q99536 MIR4514-201ENST00000581410 57 ntBASIC0.01□□□□□ -2.41
VAT1Q99536 AP000753.3-201ENST00000604083 169 ntBASIC0.01□□□□□ -2.41
VAT1Q99536 RAC1P9-201ENST00000604990 392 ntBASIC0.01□□□□□ -2.41
VAT1Q99536 AC240442.1-201ENST00000616055 283 ntBASIC0.01□□□□□ -2.41
VAT1Q99536 PVT1_3.1-201ENST00000620853 95 ntBASIC0.01□□□□□ -2.41
VAT1Q99536 MIR4315-1-201ENST00000636800 73 ntBASIC0.01□□□□□ -2.41
VAT1Q99536 MIR4315-2-201ENST00000640925 73 ntBASIC0.01□□□□□ -2.41
VAT1Q99536 SNORD116-9-201ENST00000384000 95 ntBASIC0□□□□□ -2.41
VAT1Q99536 SNORD116-3-201ENST00000384287 95 ntBASIC0□□□□□ -2.41
VAT1Q99536 SNORD116-7-201ENST00000384404 95 ntBASIC0□□□□□ -2.41
VAT1Q99536 SNORD116-5-201ENST00000384462 95 ntBASIC0□□□□□ -2.41
VAT1Q99536 RNU6-125P-201ENST00000384505 107 ntBASIC0□□□□□ -2.41
VAT1Q99536 RNY1P4-201ENST00000384595 115 ntBASIC0□□□□□ -2.41
VAT1Q99536 MIR193B-201ENST00000384907 83 ntBASIC0□□□□□ -2.41
VAT1Q99536 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0□□□□□ -2.41
VAT1Q99536 MTCO2P33-201ENST00000402100 465 ntBASIC0□□□□□ -2.41
VAT1Q99536 MTND1P1-201ENST00000445453 368 ntBASIC0□□□□□ -2.41
VAT1Q99536 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0□□□□□ -2.41
VAT1Q99536 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0□□□□□ -2.41
VAT1Q99536 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0□□□□□ -2.41
VAT1Q99536 MTND3P12-201ENST00000559068 328 ntBASIC0□□□□□ -2.41
VAT1Q99536 EIF1P4-201ENST00000572664 335 ntBASIC0□□□□□ -2.41
VAT1Q99536 MIR4790-201ENST00000577799 79 ntBASIC0□□□□□ -2.41
VAT1Q99536 SNORA25.18-201ENST00000607153 114 ntBASIC0□□□□□ -2.41
VAT1Q99536 MIR4791-201ENST00000607666 84 ntBASIC0□□□□□ -2.41
VAT1Q99536 MIR6718-201ENST00000616153 80 ntBASIC0□□□□□ -2.41
VAT1Q99536 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.01□□□□□ -2.41
VAT1Q99536 SNORD118-201ENST00000363593 134 ntBASIC-0.01□□□□□ -2.41
VAT1Q99536 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
VAT1Q99536 Y_RNA.594-201ENST00000410373 140 ntBASIC-0.01□□□□□ -2.41
VAT1Q99536 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.01□□□□□ -2.41
VAT1Q99536 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.01□□□□□ -2.41
VAT1Q99536 AL139396.1-201ENST00000421137 167 ntBASIC-0.01□□□□□ -2.41
VAT1Q99536 AC073261.1-201ENST00000429409 121 ntBASIC-0.01□□□□□ -2.41
VAT1Q99536 MTND3P21-201ENST00000433774 331 ntBASIC-0.01□□□□□ -2.41
VAT1Q99536 MTND2P22-201ENST00000444325 1033 ntBASIC-0.01□□□□□ -2.41
VAT1Q99536 CHEK2P4-201ENST00000450340 246 ntBASIC-0.01□□□□□ -2.41
VAT1Q99536 MTND5P5-201ENST00000503764 376 ntBASIC-0.01□□□□□ -2.41
VAT1Q99536 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.01□□□□□ -2.41
VAT1Q99536 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.01□□□□□ -2.41
VAT1Q99536 RNU7-181P-201ENST00000517234 74 ntBASIC-0.01□□□□□ -2.41
VAT1Q99536 SNORD100-201ENST00000408573 76 ntBASIC-0.02□□□□□ -2.41
VAT1Q99536 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.02□□□□□ -2.41
VAT1Q99536 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.02□□□□□ -2.41
VAT1Q99536 RNU6-436P-201ENST00000516171 114 ntBASIC-0.02□□□□□ -2.41
VAT1Q99536 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.02□□□□□ -2.41
VAT1Q99536 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
VAT1Q99536 MIR4264-201ENST00000583520 66 ntBASIC-0.02□□□□□ -2.41
VAT1Q99536 MIR4768-201ENST00000585270 74 ntBASIC-0.02□□□□□ -2.41
VAT1Q99536 uc_338.4-201ENST00000616635 176 ntBASIC-0.02□□□□□ -2.41
VAT1Q99536 AP000770.2-201ENST00000623694 100 ntBASIC-0.02□□□□□ -2.41
VAT1Q99536 MIR330-201ENST00000362196 94 ntBASIC-0.03□□□□□ -2.41
VAT1Q99536 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
VAT1Q99536 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.03□□□□□ -2.41
VAT1Q99536 RNU6-324P-201ENST00000363957 106 ntBASIC-0.03□□□□□ -2.41
VAT1Q99536 RNU6-268P-201ENST00000364174 107 ntBASIC-0.03□□□□□ -2.41
VAT1Q99536 RNU6-442P-201ENST00000383968 104 ntBASIC-0.03□□□□□ -2.41
VAT1Q99536 RNU6-767P-201ENST00000384132 107 ntBASIC-0.03□□□□□ -2.41
VAT1Q99536 RNU6-192P-201ENST00000391253 100 ntBASIC-0.03□□□□□ -2.41
VAT1Q99536 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
VAT1Q99536 RNU6-1050P-201ENST00000410388 107 ntBASIC-0.03□□□□□ -2.41
VAT1Q99536 AC009161.1-201ENST00000417306 376 ntBASIC-0.03□□□□□ -2.41
VAT1Q99536 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-0.03□□□□□ -2.41
VAT1Q99536 MIR2355-201ENST00000517199 87 ntBASIC-0.03□□□□□ -2.41
VAT1Q99536 AC109635.3-201ENST00000529536 185 ntBASIC-0.03□□□□□ -2.41
VAT1Q99536 AC060780.3-201ENST00000589464 80 ntBASIC-0.03□□□□□ -2.41
VAT1Q99536 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.04□□□□□ -2.42
VAT1Q99536 SNORA42.1-201ENST00000363515 137 ntBASIC-0.04□□□□□ -2.42
VAT1Q99536 RNU6-926P-201ENST00000384075 107 ntBASIC-0.04□□□□□ -2.42
VAT1Q99536 MIR938-201ENST00000401216 83 ntBASIC-0.04□□□□□ -2.42
VAT1Q99536 BTF3P11-201ENST00000426582 477 ntBASIC-0.04□□□□□ -2.42
VAT1Q99536 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-0.04□□□□□ -2.42
VAT1Q99536 RNU2-13P-201ENST00000515909 113 ntBASIC-0.04□□□□□ -2.42
VAT1Q99536 Y_RNA.682-201ENST00000516457 100 ntBASIC-0.04□□□□□ -2.42
VAT1Q99536 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.04□□□□□ -2.42
VAT1Q99536 MIR1273G-201ENST00000577677 100 ntBASIC-0.04□□□□□ -2.42
VAT1Q99536 AC090897.1-201ENST00000580909 226 ntBASIC-0.04□□□□□ -2.42
VAT1Q99536 AC087685.1-201ENST00000587507 141 ntBASIC-0.04□□□□□ -2.42
VAT1Q99536 MIR1244-1-201ENST00000612829 85 ntBASIC-0.04□□□□□ -2.42
VAT1Q99536 MIR1244-3-201ENST00000635744 85 ntBASIC-0.04□□□□□ -2.42
VAT1Q99536 MIR1244-2-201ENST00000636449 85 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms