Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.44□□□□□ -2.48
LYSMD1Q96S90 RNU6-847P-201ENST00000411115 108 ntBASIC-0.44□□□□□ -2.48
LYSMD1Q96S90 MCFD2P1-201ENST00000417812 300 ntBASIC-0.44□□□□□ -2.48
LYSMD1Q96S90 MTND1P11-201ENST00000456661 876 ntBASIC-0.44□□□□□ -2.48
LYSMD1Q96S90 RNU6-1129P-201ENST00000515964 104 ntBASIC-0.44□□□□□ -2.48
LYSMD1Q96S90 RNU6-320P-201ENST00000516511 106 ntBASIC-0.44□□□□□ -2.48
LYSMD1Q96S90 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.44□□□□□ -2.48
LYSMD1Q96S90 SNORD114-7-201ENST00000362520 77 ntBASIC-0.45□□□□□ -2.48
LYSMD1Q96S90 RNU6-324P-201ENST00000363957 106 ntBASIC-0.45□□□□□ -2.48
LYSMD1Q96S90 RNU4-28P-201ENST00000364739 141 ntBASIC-0.45□□□□□ -2.48
LYSMD1Q96S90 SNORA1.2-201ENST00000365189 134 ntBASIC-0.45□□□□□ -2.48
LYSMD1Q96S90 RNU6-128P-201ENST00000383976 107 ntBASIC-0.45□□□□□ -2.48
LYSMD1Q96S90 RNU6-306P-201ENST00000384617 107 ntBASIC-0.45□□□□□ -2.48
LYSMD1Q96S90 MIR588-201ENST00000384900 83 ntBASIC-0.45□□□□□ -2.48
LYSMD1Q96S90 MT-TH-201ENST00000387441 69 ntBASIC-0.45□□□□□ -2.48
LYSMD1Q96S90 RNU6-269P-201ENST00000391077 97 ntBASIC-0.45□□□□□ -2.48
LYSMD1Q96S90 MTCO2P19-201ENST00000427513 598 ntBASIC-0.45□□□□□ -2.48
LYSMD1Q96S90 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.45□□□□□ -2.48
LYSMD1Q96S90 AC236972.2-201ENST00000434979 310 ntBASIC-0.45□□□□□ -2.48
LYSMD1Q96S90 RNU7-165P-201ENST00000458864 60 ntBASIC-0.45□□□□□ -2.48
LYSMD1Q96S90 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.45□□□□□ -2.48
LYSMD1Q96S90 IGLVI-20-201ENST00000519296 130 ntBASIC-0.45□□□□□ -2.48
LYSMD1Q96S90 AL158211.1-201ENST00000566763 763 ntBASIC-0.45□□□□□ -2.48
LYSMD1Q96S90 AC138869.1-201ENST00000568623 124 ntBASIC-0.45□□□□□ -2.48
LYSMD1Q96S90 MIR5696-201ENST00000578474 85 ntBASIC-0.45□□□□□ -2.48
LYSMD1Q96S90 AC040904.1-201ENST00000590850 223 ntBASIC-0.45□□□□□ -2.48
LYSMD1Q96S90 AC092954.2-201ENST00000609103 430 ntBASIC-0.45□□□□□ -2.48
LYSMD1Q96S90 AC019193.3-201ENST00000609144 554 ntBASIC-0.45□□□□□ -2.48
LYSMD1Q96S90 AC134878.1-201ENST00000619901 243 ntBASIC-0.45□□□□□ -2.48
LYSMD1Q96S90 uc_338.22-201ENST00000622722 187 ntBASIC-0.45□□□□□ -2.48
LYSMD1Q96S90 AC079248.2-201ENST00000623779 326 ntBASIC-0.45□□□□□ -2.48
LYSMD1Q96S90 MIR410-201ENST00000362222 80 ntBASIC-0.46□□□□□ -2.48
LYSMD1Q96S90 SNORA18.1-201ENST00000363418 128 ntBASIC-0.46□□□□□ -2.48
LYSMD1Q96S90 SNORD115-30-201ENST00000364117 82 ntBASIC-0.46□□□□□ -2.48
LYSMD1Q96S90 RNU6-923P-201ENST00000364753 107 ntBASIC-0.46□□□□□ -2.48
LYSMD1Q96S90 SNORA72.3-201ENST00000365074 132 ntBASIC-0.46□□□□□ -2.48
LYSMD1Q96S90 RNU6-652P-201ENST00000365488 107 ntBASIC-0.46□□□□□ -2.48
LYSMD1Q96S90 EIF1P2-201ENST00000428233 350 ntBASIC-0.46□□□□□ -2.48
LYSMD1Q96S90 MTND3P16-201ENST00000452205 344 ntBASIC-0.46□□□□□ -2.48
LYSMD1Q96S90 RNU7-87P-201ENST00000459343 62 ntBASIC-0.46□□□□□ -2.48
LYSMD1Q96S90 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.46□□□□□ -2.48
LYSMD1Q96S90 RNU6-830P-201ENST00000516353 107 ntBASIC-0.46□□□□□ -2.48
LYSMD1Q96S90 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.46□□□□□ -2.48
LYSMD1Q96S90 MIR3915-201ENST00000578518 97 ntBASIC-0.46□□□□□ -2.48
LYSMD1Q96S90 MIR4273-201ENST00000582824 84 ntBASIC-0.46□□□□□ -2.48
LYSMD1Q96S90 AC092447.9-201ENST00000603395 144 ntBASIC-0.46□□□□□ -2.48
LYSMD1Q96S90 AL391262.2-201ENST00000622466 494 ntBASIC-0.46□□□□□ -2.48
LYSMD1Q96S90 AC097520.1-201ENST00000624435 385 ntBASIC-0.46□□□□□ -2.48
LYSMD1Q96S90 RNY1P16-201ENST00000363063 111 ntBASIC-0.47□□□□□ -2.48
LYSMD1Q96S90 RNU6-254P-201ENST00000363377 107 ntBASIC-0.47□□□□□ -2.48
LYSMD1Q96S90 RNU6-268P-201ENST00000364174 107 ntBASIC-0.47□□□□□ -2.48
LYSMD1Q96S90 SNORA1.1-201ENST00000364671 133 ntBASIC-0.47□□□□□ -2.48
LYSMD1Q96S90 Y_RNA.372-201ENST00000365599 102 ntBASIC-0.47□□□□□ -2.48
LYSMD1Q96S90 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.47□□□□□ -2.48
LYSMD1Q96S90 SNORD38B-201ENST00000384690 67 ntBASIC-0.47□□□□□ -2.48
LYSMD1Q96S90 MIR106A-201ENST00000384870 81 ntBASIC-0.47□□□□□ -2.48
LYSMD1Q96S90 SNORA26.8-201ENST00000391306 124 ntBASIC-0.47□□□□□ -2.48
LYSMD1Q96S90 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.47□□□□□ -2.48
LYSMD1Q96S90 AL031667.1-201ENST00000440222 725 ntBASIC-0.47□□□□□ -2.48
LYSMD1Q96S90 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.47□□□□□ -2.48
LYSMD1Q96S90 MTCO2P4-201ENST00000517968 247 ntBASIC-0.47□□□□□ -2.48
LYSMD1Q96S90 AC124303.1-201ENST00000605703 360 ntBASIC-0.47□□□□□ -2.48
LYSMD1Q96S90 AC091304.10-201ENST00000641554 121 ntBASIC-0.47□□□□□ -2.48
LYSMD1Q96S90 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.48□□□□□ -2.49
LYSMD1Q96S90 SNORD114-28-201ENST00000363610 72 ntBASIC-0.48□□□□□ -2.49
LYSMD1Q96S90 Y_RNA.169-201ENST00000363745 96 ntBASIC-0.48□□□□□ -2.49
LYSMD1Q96S90 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.48□□□□□ -2.49
LYSMD1Q96S90 SNORA72-201ENST00000384339 132 ntBASIC-0.48□□□□□ -2.49
LYSMD1Q96S90 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.48□□□□□ -2.49
LYSMD1Q96S90 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-0.48□□□□□ -2.49
LYSMD1Q96S90 POLR2KP2-201ENST00000438155 177 ntBASIC-0.48□□□□□ -2.49
LYSMD1Q96S90 MTND2P39-201ENST00000457230 764 ntBASIC-0.48□□□□□ -2.49
LYSMD1Q96S90 SNORD11.1-201ENST00000459482 85 ntBASIC-0.48□□□□□ -2.49
LYSMD1Q96S90 SNORA40.9-201ENST00000515895 93 ntBASIC-0.48□□□□□ -2.49
LYSMD1Q96S90 MTND1P24-201ENST00000552175 861 ntBASIC-0.48□□□□□ -2.49
LYSMD1Q96S90 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.48□□□□□ -2.49
LYSMD1Q96S90 AP000720.1-201ENST00000625091 483 ntBASIC-0.48□□□□□ -2.49
LYSMD1Q96S90 ZNF299P-201ENST00000406845 1804 ntBASIC-0.48□□□□□ -2.49
LYSMD1Q96S90 RNA5SP275-201ENST00000363936 118 ntBASIC-0.49□□□□□ -2.49
LYSMD1Q96S90 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.49□□□□□ -2.49
LYSMD1Q96S90 AL031003.1-201ENST00000404229 172 ntBASIC-0.49□□□□□ -2.49
LYSMD1Q96S90 RNU4-83P-201ENST00000410863 133 ntBASIC-0.49□□□□□ -2.49
LYSMD1Q96S90 AC096531.1-201ENST00000419107 107 ntBASIC-0.49□□□□□ -2.49
LYSMD1Q96S90 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.49□□□□□ -2.49
LYSMD1Q96S90 SNRPGP14-201ENST00000435400 219 ntBASIC-0.49□□□□□ -2.49
LYSMD1Q96S90 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.49□□□□□ -2.49
LYSMD1Q96S90 RNU7-67P-201ENST00000459003 62 ntBASIC-0.49□□□□□ -2.49
LYSMD1Q96S90 U8.19-201ENST00000459095 133 ntBASIC-0.49□□□□□ -2.49
LYSMD1Q96S90 U8.22-201ENST00000459141 133 ntBASIC-0.49□□□□□ -2.49
LYSMD1Q96S90 snoU13.16-201ENST00000459350 104 ntBASIC-0.49□□□□□ -2.49
LYSMD1Q96S90 RNU6-848P-201ENST00000515948 107 ntBASIC-0.49□□□□□ -2.49
LYSMD1Q96S90 RNU6-617P-201ENST00000516147 107 ntBASIC-0.49□□□□□ -2.49
LYSMD1Q96S90 RNU6-473P-201ENST00000516164 107 ntBASIC-0.49□□□□□ -2.49
LYSMD1Q96S90 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.49□□□□□ -2.49
LYSMD1Q96S90 ZNF519P2-201ENST00000557032 169 ntBASIC-0.49□□□□□ -2.49
LYSMD1Q96S90 MIR4645-201ENST00000583158 77 ntBASIC-0.49□□□□□ -2.49
LYSMD1Q96S90 AL355297.3-201ENST00000604082 446 ntBASIC-0.49□□□□□ -2.49
LYSMD1Q96S90 JPX_2.1-201ENST00000614161 69 ntBASIC-0.49□□□□□ -2.49
LYSMD1Q96S90 MIR6828-201ENST00000636181 60 ntBASIC-0.49□□□□□ -2.49
LYSMD1Q96S90 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms