Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 AC117470.1-201ENST00000381974 330 ntBASIC1.03□□□□□ -2.24
RAB3IPQ96QF0 RNY3P14-201ENST00000384309 102 ntBASIC1.03□□□□□ -2.24
RAB3IPQ96QF0 RNU6-21P-201ENST00000384710 107 ntBASIC1.03□□□□□ -2.24
RAB3IPQ96QF0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.03□□□□□ -2.24
RAB3IPQ96QF0 RNU7-21P-201ENST00000459430 62 ntBASIC1.03□□□□□ -2.24
RAB3IPQ96QF0 U8.20-201ENST00000459445 131 ntBASIC1.03□□□□□ -2.24
RAB3IPQ96QF0 AC117454.1-201ENST00000491120 168 ntBASIC1.03□□□□□ -2.24
RAB3IPQ96QF0 MTND3P22-201ENST00000510932 243 ntBASIC1.03□□□□□ -2.24
RAB3IPQ96QF0 RNU7-116P-201ENST00000516940 62 ntBASIC1.03□□□□□ -2.24
RAB3IPQ96QF0 Y_RNA.714-201ENST00000517065 90 ntBASIC1.03□□□□□ -2.24
RAB3IPQ96QF0 SNORA74.3-201ENST00000517108 154 ntBASIC1.03□□□□□ -2.24
RAB3IPQ96QF0 AL157834.3-201ENST00000615543 103 ntBASIC1.03□□□□□ -2.24
RAB3IPQ96QF0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
RAB3IPQ96QF0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
RAB3IPQ96QF0 SNORA25.3-201ENST00000363205 127 ntBASIC1.02□□□□□ -2.25
RAB3IPQ96QF0 SNORD114-24-201ENST00000365029 72 ntBASIC1.02□□□□□ -2.25
RAB3IPQ96QF0 Y_RNA.368-201ENST00000365547 113 ntBASIC1.02□□□□□ -2.25
RAB3IPQ96QF0 Y_RNA.456-201ENST00000384232 111 ntBASIC1.02□□□□□ -2.25
RAB3IPQ96QF0 RNY1P14-201ENST00000384426 108 ntBASIC1.02□□□□□ -2.25
RAB3IPQ96QF0 Y_RNA.551-201ENST00000384661 102 ntBASIC1.02□□□□□ -2.25
RAB3IPQ96QF0 MIR1287-201ENST00000408492 90 ntBASIC1.02□□□□□ -2.25
RAB3IPQ96QF0 RNU6-321P-201ENST00000410912 106 ntBASIC1.02□□□□□ -2.25
RAB3IPQ96QF0 RPL23AP54-201ENST00000495129 419 ntBASIC1.02□□□□□ -2.25
RAB3IPQ96QF0 AC024405.2-202ENST00000532731 184 ntBASIC1.02□□□□□ -2.25
RAB3IPQ96QF0 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.02□□□□□ -2.25
RAB3IPQ96QF0 Y_RNA.226-201ENST00000364337 114 ntBASIC1.01□□□□□ -2.25
RAB3IPQ96QF0 SNORA25.9-201ENST00000365087 128 ntBASIC1.01□□□□□ -2.25
RAB3IPQ96QF0 Y_RNA.330-201ENST00000365230 109 ntBASIC1.01□□□□□ -2.25
RAB3IPQ96QF0 Y_RNA.471-201ENST00000384312 102 ntBASIC1.01□□□□□ -2.25
RAB3IPQ96QF0 MIR942-201ENST00000401111 86 ntBASIC1.01□□□□□ -2.25
RAB3IPQ96QF0 HMGN2P32-201ENST00000444648 269 ntBASIC1.01□□□□□ -2.25
RAB3IPQ96QF0 RNU7-90P-201ENST00000459216 62 ntBASIC1.01□□□□□ -2.25
RAB3IPQ96QF0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.01□□□□□ -2.25
RAB3IPQ96QF0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.01□□□□□ -2.25
RAB3IPQ96QF0 RNU7-41P-201ENST00000515917 61 ntBASIC1.01□□□□□ -2.25
RAB3IPQ96QF0 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.01□□□□□ -2.25
RAB3IPQ96QF0 AC136932.1-201ENST00000574771 208 ntBASIC1.01□□□□□ -2.25
RAB3IPQ96QF0 MIR4661-201ENST00000582720 75 ntBASIC1.01□□□□□ -2.25
RAB3IPQ96QF0 AC007485.1-201ENST00000616755 206 ntBASIC1.01□□□□□ -2.25
RAB3IPQ96QF0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1□□□□□ -2.25
RAB3IPQ96QF0 AL391516.1-201ENST00000554380 2449 ntBASIC1□□□□□ -2.25
RAB3IPQ96QF0 MIR103A2-201ENST00000362154 78 ntBASIC1□□□□□ -2.25
RAB3IPQ96QF0 RNA5SP264-201ENST00000363115 107 ntBASIC1□□□□□ -2.25
RAB3IPQ96QF0 Y_RNA.197-201ENST00000364004 102 ntBASIC1□□□□□ -2.25
RAB3IPQ96QF0 SNORD14E-201ENST00000364009 85 ntBASIC1□□□□□ -2.25
RAB3IPQ96QF0 Y_RNA.203-201ENST00000364106 102 ntBASIC1□□□□□ -2.25
RAB3IPQ96QF0 Y_RNA.269-201ENST00000364685 89 ntBASIC1□□□□□ -2.25
RAB3IPQ96QF0 U8.7-201ENST00000364940 136 ntBASIC1□□□□□ -2.25
RAB3IPQ96QF0 Y_RNA.526-201ENST00000384572 110 ntBASIC1□□□□□ -2.25
RAB3IPQ96QF0 AC010655.3-201ENST00000478818 450 ntBASIC1□□□□□ -2.25
RAB3IPQ96QF0 AC005840.1-201ENST00000498412 377 ntBASIC1□□□□□ -2.25
RAB3IPQ96QF0 PDCD5P2-201ENST00000507570 312 ntBASIC1□□□□□ -2.25
RAB3IPQ96QF0 AC040926.1-201ENST00000530195 238 ntBASIC1□□□□□ -2.25
RAB3IPQ96QF0 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1□□□□□ -2.25
RAB3IPQ96QF0 MIR4764-201ENST00000580680 88 ntBASIC1□□□□□ -2.25
RAB3IPQ96QF0 AP003357.1-201ENST00000604497 148 ntBASIC1□□□□□ -2.25
RAB3IPQ96QF0 AL020996.3-201ENST00000606617 222 ntBASIC1□□□□□ -2.25
RAB3IPQ96QF0 JPX_2.1-201ENST00000614161 69 ntBASIC1□□□□□ -2.25
RAB3IPQ96QF0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1□□□□□ -2.25
RAB3IPQ96QF0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
RAB3IPQ96QF0 RNU4-50P-201ENST00000364361 141 ntBASIC0.99□□□□□ -2.25
RAB3IPQ96QF0 Y_RNA.327-201ENST00000365201 102 ntBASIC0.99□□□□□ -2.25
RAB3IPQ96QF0 MIR200A-201ENST00000384875 90 ntBASIC0.99□□□□□ -2.25
RAB3IPQ96QF0 MIR15B-201ENST00000385045 98 ntBASIC0.99□□□□□ -2.25
RAB3IPQ96QF0 SNORD123-201ENST00000459473 70 ntBASIC0.99□□□□□ -2.25
RAB3IPQ96QF0 HMGN1P10-201ENST00000474557 553 ntBASIC0.99□□□□□ -2.25
RAB3IPQ96QF0 Y_RNA.673-201ENST00000516306 88 ntBASIC0.99□□□□□ -2.25
RAB3IPQ96QF0 RNU7-115P-201ENST00000516433 55 ntBASIC0.99□□□□□ -2.25
RAB3IPQ96QF0 Y_RNA.713-201ENST00000517013 96 ntBASIC0.99□□□□□ -2.25
RAB3IPQ96QF0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.99□□□□□ -2.25
RAB3IPQ96QF0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.99□□□□□ -2.25
RAB3IPQ96QF0 MIR548AY-201ENST00000617669 107 ntBASIC0.99□□□□□ -2.25
RAB3IPQ96QF0 Y_RNA.813-201ENST00000364639 102 ntBASIC0.98□□□□□ -2.25
RAB3IPQ96QF0 RNU6-1187P-201ENST00000364771 110 ntBASIC0.98□□□□□ -2.25
RAB3IPQ96QF0 SNORD63-201ENST00000384262 68 ntBASIC0.98□□□□□ -2.25
RAB3IPQ96QF0 MIR499A-201ENST00000384903 122 ntBASIC0.98□□□□□ -2.25
RAB3IPQ96QF0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.98□□□□□ -2.25
RAB3IPQ96QF0 ACA64.5-201ENST00000516207 127 ntBASIC0.98□□□□□ -2.25
RAB3IPQ96QF0 AC127455.1-201ENST00000565496 145 ntBASIC0.98□□□□□ -2.25
RAB3IPQ96QF0 MIR6078-201ENST00000611069 100 ntBASIC0.98□□□□□ -2.25
RAB3IPQ96QF0 PART1_1.1-201ENST00000611761 217 ntBASIC0.98□□□□□ -2.25
RAB3IPQ96QF0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
RAB3IPQ96QF0 RNU6-1048P-201ENST00000364054 107 ntBASIC0.97□□□□□ -2.25
RAB3IPQ96QF0 Y_RNA.286-201ENST00000364813 102 ntBASIC0.97□□□□□ -2.25
RAB3IPQ96QF0 Y_RNA.383-201ENST00000383855 97 ntBASIC0.97□□□□□ -2.25
RAB3IPQ96QF0 MIR802-201ENST00000390235 94 ntBASIC0.97□□□□□ -2.25
RAB3IPQ96QF0 POLR2KP2-201ENST00000438155 177 ntBASIC0.97□□□□□ -2.25
RAB3IPQ96QF0 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.97□□□□□ -2.25
RAB3IPQ96QF0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.97□□□□□ -2.25
RAB3IPQ96QF0 AL080274.1-201ENST00000605565 220 ntBASIC0.97□□□□□ -2.25
RAB3IPQ96QF0 SNORD114-21-201ENST00000606412 72 ntBASIC0.97□□□□□ -2.25
RAB3IPQ96QF0 RNU4-80P-201ENST00000363200 141 ntBASIC0.96□□□□□ -2.26
RAB3IPQ96QF0 Y_RNA.148-201ENST00000363557 117 ntBASIC0.96□□□□□ -2.26
RAB3IPQ96QF0 RNU6-1209P-201ENST00000363655 107 ntBASIC0.96□□□□□ -2.26
RAB3IPQ96QF0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.96□□□□□ -2.26
RAB3IPQ96QF0 RNU6-130P-201ENST00000411112 103 ntBASIC0.96□□□□□ -2.26
RAB3IPQ96QF0 POLR2J4-204ENST00000418424 324 ntBASIC0.96□□□□□ -2.26
RAB3IPQ96QF0 AC093852.1-201ENST00000503587 266 ntBASIC0.96□□□□□ -2.26
RAB3IPQ96QF0 RNU7-43P-201ENST00000516554 64 ntBASIC0.96□□□□□ -2.26
RAB3IPQ96QF0 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms