Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 SNORD50B-201ENST00000364995 70 ntBASIC0.81□□□□□ -2.28
LINC00477Q96M19 Y_RNA.368-201ENST00000365547 113 ntBASIC0.81□□□□□ -2.28
LINC00477Q96M19 Y_RNA.389-201ENST00000383924 113 ntBASIC0.81□□□□□ -2.28
LINC00477Q96M19 Y_RNA.462-201ENST00000384268 102 ntBASIC0.81□□□□□ -2.28
LINC00477Q96M19 MIR522-201ENST00000385071 87 ntBASIC0.81□□□□□ -2.28
LINC00477Q96M19 MIR516B2-201ENST00000385190 85 ntBASIC0.81□□□□□ -2.28
LINC00477Q96M19 MIR653-201ENST00000385279 96 ntBASIC0.81□□□□□ -2.28
LINC00477Q96M19 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
LINC00477Q96M19 MIR1252-201ENST00000408861 65 ntBASIC0.81□□□□□ -2.28
LINC00477Q96M19 RPL39P38-201ENST00000467018 153 ntBASIC0.81□□□□□ -2.28
LINC00477Q96M19 AC048334.1-201ENST00000477975 159 ntBASIC0.81□□□□□ -2.28
LINC00477Q96M19 MRPS35P2-201ENST00000508242 191 ntBASIC0.81□□□□□ -2.28
LINC00477Q96M19 RNU7-12P-201ENST00000516030 62 ntBASIC0.81□□□□□ -2.28
LINC00477Q96M19 RNU6-191P-201ENST00000516295 94 ntBASIC0.81□□□□□ -2.28
LINC00477Q96M19 AC131281.1-201ENST00000522984 164 ntBASIC0.81□□□□□ -2.28
LINC00477Q96M19 MIR3192-201ENST00000584920 77 ntBASIC0.81□□□□□ -2.28
LINC00477Q96M19 AL096861.1-201ENST00000610899 123 ntBASIC0.81□□□□□ -2.28
LINC00477Q96M19 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.81□□□□□ -2.28
LINC00477Q96M19 Y_RNA.341-201ENST00000365341 102 ntBASIC0.8□□□□□ -2.28
LINC00477Q96M19 MIR520G-201ENST00000385064 90 ntBASIC0.8□□□□□ -2.28
LINC00477Q96M19 AP1B1P2-201ENST00000416196 106 ntBASIC0.8□□□□□ -2.28
LINC00477Q96M19 MLLT10P1-201ENST00000418346 262 ntBASIC0.8□□□□□ -2.28
LINC00477Q96M19 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.8□□□□□ -2.28
LINC00477Q96M19 RNU7-141P-201ENST00000459304 62 ntBASIC0.8□□□□□ -2.28
LINC00477Q96M19 RNU7-94P-201ENST00000459576 63 ntBASIC0.8□□□□□ -2.28
LINC00477Q96M19 RPL39P28-201ENST00000465655 155 ntBASIC0.8□□□□□ -2.28
LINC00477Q96M19 MTATP8P1-201ENST00000467115 207 ntBASIC0.8□□□□□ -2.28
LINC00477Q96M19 RPS26P48-201ENST00000491713 339 ntBASIC0.8□□□□□ -2.28
LINC00477Q96M19 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.8□□□□□ -2.28
LINC00477Q96M19 MIR3684-201ENST00000579779 74 ntBASIC0.8□□□□□ -2.28
LINC00477Q96M19 AL356055.1-201ENST00000602528 446 ntBASIC0.8□□□□□ -2.28
LINC00477Q96M19 AC120024.3-201ENST00000603167 156 ntBASIC0.8□□□□□ -2.28
LINC00477Q96M19 AC005972.2-201ENST00000604690 348 ntBASIC0.8□□□□□ -2.28
LINC00477Q96M19 MIR376A1-201ENST00000616574 68 ntBASIC0.8□□□□□ -2.28
LINC00477Q96M19 MIR378A-201ENST00000362177 66 ntBASIC0.79□□□□□ -2.28
LINC00477Q96M19 RNU6-199P-201ENST00000362954 107 ntBASIC0.79□□□□□ -2.28
LINC00477Q96M19 RNU4-50P-201ENST00000364361 141 ntBASIC0.79□□□□□ -2.28
LINC00477Q96M19 Y_RNA.424-201ENST00000384063 103 ntBASIC0.79□□□□□ -2.28
LINC00477Q96M19 Y_RNA.431-201ENST00000384086 102 ntBASIC0.79□□□□□ -2.28
LINC00477Q96M19 RNU6-763P-201ENST00000390865 106 ntBASIC0.79□□□□□ -2.28
LINC00477Q96M19 RNU6-651P-201ENST00000411040 105 ntBASIC0.79□□□□□ -2.28
LINC00477Q96M19 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.79□□□□□ -2.28
LINC00477Q96M19 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.79□□□□□ -2.28
LINC00477Q96M19 SNX2P2-201ENST00000424553 323 ntBASIC0.79□□□□□ -2.28
LINC00477Q96M19 MTCO1P5-201ENST00000433573 344 ntBASIC0.79□□□□□ -2.28
LINC00477Q96M19 Y_RNA.637-201ENST00000459424 114 ntBASIC0.79□□□□□ -2.28
LINC00477Q96M19 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.79□□□□□ -2.28
LINC00477Q96M19 RNU6-764P-201ENST00000516396 105 ntBASIC0.79□□□□□ -2.28
LINC00477Q96M19 RNU7-115P-201ENST00000516433 55 ntBASIC0.79□□□□□ -2.28
LINC00477Q96M19 POLR3GP1-201ENST00000594073 261 ntBASIC0.79□□□□□ -2.28
LINC00477Q96M19 AC136443.5-201ENST00000603741 370 ntBASIC0.79□□□□□ -2.28
LINC00477Q96M19 MIR6078-201ENST00000611069 100 ntBASIC0.79□□□□□ -2.28
LINC00477Q96M19 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.79□□□□□ -2.28
LINC00477Q96M19 AL442644.1-201ENST00000454390 3105 ntBASIC0.79□□□□□ -2.28
LINC00477Q96M19 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.78□□□□□ -2.28
LINC00477Q96M19 Y_RNA.19-201ENST00000362462 99 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 Y_RNA.183-201ENST00000363882 113 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 Y_RNA.796-201ENST00000364268 102 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 RNU4-10P-201ENST00000364383 140 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 U8.5-201ENST00000364528 136 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 Y_RNA.799-201ENST00000364992 102 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 SNORA72.4-201ENST00000384174 132 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 Y_RNA.572-201ENST00000384757 98 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 SNORD72-201ENST00000390994 80 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 RNU11-5P-201ENST00000391216 129 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 RNA5SP482-201ENST00000391269 118 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 MIR1298-201ENST00000408783 112 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 RPL23AP36-201ENST00000413895 458 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.78□□□□□ -2.28
LINC00477Q96M19 AC087343.1-201ENST00000477341 475 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 RN7SKP88-201ENST00000516847 250 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 AC090142.3-201ENST00000519012 385 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 AC022616.4-201ENST00000522985 181 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 MIR4524B-201ENST00000581569 115 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 MIR4661-201ENST00000582720 75 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 MIR4762-201ENST00000585261 75 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 FAM106DP-201ENST00000586416 501 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 AC005357.1-201ENST00000588399 301 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 AP003357.1-201ENST00000604497 148 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 AC103810.9-201ENST00000606688 112 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 7SK.8-201ENST00000612110 250 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 7SK.11-201ENST00000615477 250 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 7SK.13-201ENST00000622040 250 ntBASIC0.78□□□□□ -2.28
LINC00477Q96M19 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
LINC00477Q96M19 AL391987.6-201ENST00000305671 199 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 Y_RNA.158-201ENST00000363651 101 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 RNU6-1209P-201ENST00000363655 107 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 SNORA33.2-201ENST00000365413 134 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 AC117470.1-201ENST00000381974 330 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 RNU6-1323P-201ENST00000384025 107 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 Y_RNA.455-201ENST00000384230 98 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 RNU6-662P-201ENST00000384253 104 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 SNORA72-201ENST00000384339 132 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 RNU6-950P-201ENST00000384651 107 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 RNU6-21P-201ENST00000384710 107 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 SNORD28B-201ENST00000390993 75 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 Y_RNA.581-201ENST00000391017 97 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 AL603910.2-201ENST00000407268 136 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms