Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC126544.2-201ENST00000625174 749 ntBASIC-1□□□□□ -2.57
SPG11Q96JI7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1□□□□□ -2.57
SPG11Q96JI7 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.01□□□□□ -2.57
SPG11Q96JI7 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.01□□□□□ -2.57
SPG11Q96JI7 SNORD114-29-201ENST00000364819 70 ntBASIC-1.01□□□□□ -2.57
SPG11Q96JI7 RNU5E-6P-201ENST00000365574 115 ntBASIC-1.01□□□□□ -2.57
SPG11Q96JI7 RNU6-926P-201ENST00000384075 107 ntBASIC-1.01□□□□□ -2.57
SPG11Q96JI7 RNU5A-5P-201ENST00000411054 116 ntBASIC-1.01□□□□□ -2.57
SPG11Q96JI7 RPL23AP30-201ENST00000432419 501 ntBASIC-1.01□□□□□ -2.57
SPG11Q96JI7 SNRPGP14-201ENST00000435400 219 ntBASIC-1.01□□□□□ -2.57
SPG11Q96JI7 ZNF114P1-201ENST00000453500 292 ntBASIC-1.01□□□□□ -2.57
SPG11Q96JI7 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-1.01□□□□□ -2.57
SPG11Q96JI7 AC007012.1-201ENST00000567192 175 ntBASIC-1.01□□□□□ -2.57
SPG11Q96JI7 AC245014.2-201ENST00000603689 287 ntBASIC-1.01□□□□□ -2.57
SPG11Q96JI7 AL445435.1-201ENST00000604232 665 ntBASIC-1.01□□□□□ -2.57
SPG11Q96JI7 AC006435.5-201ENST00000624486 112 ntBASIC-1.01□□□□□ -2.57
SPG11Q96JI7 AC068137.4-201ENST00000638485 296 ntBASIC-1.01□□□□□ -2.57
SPG11Q96JI7 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.01□□□□□ -2.57
SPG11Q96JI7 RNU6-891P-201ENST00000384280 111 ntBASIC-1.01□□□□□ -2.57
SPG11Q96JI7 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.01□□□□□ -2.57
SPG11Q96JI7 MTND2P20-201ENST00000440805 661 ntBASIC-1.01□□□□□ -2.57
SPG11Q96JI7 RNU6-765P-201ENST00000516916 99 ntBASIC-1.01□□□□□ -2.57
SPG11Q96JI7 RNU6-64P-201ENST00000517119 105 ntBASIC-1.01□□□□□ -2.57
SPG11Q96JI7 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-1.01□□□□□ -2.57
SPG11Q96JI7 SNORD18.1-201ENST00000363807 70 ntBASIC-1.02□□□□□ -2.57
SPG11Q96JI7 RNU6-873P-201ENST00000363833 107 ntBASIC-1.02□□□□□ -2.57
SPG11Q96JI7 RNU6-740P-201ENST00000364734 105 ntBASIC-1.02□□□□□ -2.57
SPG11Q96JI7 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.02□□□□□ -2.57
SPG11Q96JI7 AC008628.2-201ENST00000502605 298 ntBASIC-1.02□□□□□ -2.57
SPG11Q96JI7 RNU2-56P-201ENST00000516826 190 ntBASIC-1.02□□□□□ -2.57
SPG11Q96JI7 AC104576.1-201ENST00000524225 88 ntBASIC-1.02□□□□□ -2.57
SPG11Q96JI7 AC131235.4-201ENST00000609288 620 ntBASIC-1.02□□□□□ -2.57
SPG11Q96JI7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.02□□□□□ -2.57
SPG11Q96JI7 SNORA27.1-201ENST00000362604 124 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 RNY1P11-201ENST00000363759 113 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 RNU6-1286P-201ENST00000383871 107 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 SNORA69-201ENST00000383895 132 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 MIR527-201ENST00000385244 85 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.03□□□□□ -2.57
SPG11Q96JI7 MIR548K-201ENST00000408406 116 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 AC018710.1-201ENST00000506509 158 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-1.03□□□□□ -2.57
SPG11Q96JI7 MIR8066-201ENST00000617280 78 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 AC023510.2-201ENST00000622162 746 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 MIR30D-201ENST00000362283 70 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 SNORD115-8-201ENST00000363856 82 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 SNORD115-38-201ENST00000365037 82 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 SNORD115-35-201ENST00000365122 82 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 Y_RNA.504-201ENST00000384481 104 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 MIR558-201ENST00000384920 94 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 RNU4-55P-201ENST00000410731 137 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 AL008987.1-201ENST00000415528 237 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 MTND2P18-201ENST00000419962 1030 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 RNU6-412P-201ENST00000516434 106 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 RNU6-344P-201ENST00000516635 111 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 AP003072.1-201ENST00000531740 145 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 MIR4473-201ENST00000583731 91 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 AC073539.2-201ENST00000597113 165 ntBASIC-1.03□□□□□ -2.57
SPG11Q96JI7 SNORA1.2-201ENST00000365189 134 ntBASIC-1.04□□□□□ -2.58
SPG11Q96JI7 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.04□□□□□ -2.58
SPG11Q96JI7 Y_RNA.529-201ENST00000384586 119 ntBASIC-1.04□□□□□ -2.58
SPG11Q96JI7 RNU6-1179P-201ENST00000384667 107 ntBASIC-1.04□□□□□ -2.58
SPG11Q96JI7 MIR518F-201ENST00000384973 87 ntBASIC-1.04□□□□□ -2.58
SPG11Q96JI7 RNU6-847P-201ENST00000411115 108 ntBASIC-1.04□□□□□ -2.58
SPG11Q96JI7 RPL7P42-201ENST00000481005 679 ntBASIC-1.04□□□□□ -2.58
SPG11Q96JI7 RNU2-10P-201ENST00000516375 211 ntBASIC-1.04□□□□□ -2.58
SPG11Q96JI7 HIF1AP1-201ENST00000553642 175 ntBASIC-1.04□□□□□ -2.58
SPG11Q96JI7 AL133255.1-201ENST00000606374 441 ntBASIC-1.04□□□□□ -2.58
SPG11Q96JI7 RNY3P13-201ENST00000365542 102 ntBASIC-1.04□□□□□ -2.58
SPG11Q96JI7 SNORD65C-201ENST00000390962 71 ntBASIC-1.04□□□□□ -2.58
SPG11Q96JI7 AC012306.1-201ENST00000423267 114 ntBASIC-1.04□□□□□ -2.58
SPG11Q96JI7 AL049777.1-201ENST00000622740 518 ntBASIC-1.04□□□□□ -2.58
SPG11Q96JI7 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.05□□□□□ -2.58
SPG11Q96JI7 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.05□□□□□ -2.58
SPG11Q96JI7 RNU6-692P-201ENST00000384496 107 ntBASIC-1.05□□□□□ -2.58
SPG11Q96JI7 MT-TM-201ENST00000387377 68 ntBASIC-1.05□□□□□ -2.58
SPG11Q96JI7 MTCYBP4-201ENST00000401524 249 ntBASIC-1.05□□□□□ -2.58
SPG11Q96JI7 AC096949.1-201ENST00000412047 152 ntBASIC-1.05□□□□□ -2.58
SPG11Q96JI7 AC004386.2-201ENST00000441858 148 ntBASIC-1.05□□□□□ -2.58
SPG11Q96JI7 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.05□□□□□ -2.58
SPG11Q96JI7 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-1.05□□□□□ -2.58
SPG11Q96JI7 ADI1P3-201ENST00000549509 470 ntBASIC-1.05□□□□□ -2.58
SPG11Q96JI7 AL121757.2-201ENST00000611223 313 ntBASIC-1.05□□□□□ -2.58
SPG11Q96JI7 AC091931.1-201ENST00000623488 728 ntBASIC-1.05□□□□□ -2.58
SPG11Q96JI7 MTND1P7-201ENST00000632801 297 ntBASIC-1.05□□□□□ -2.58
SPG11Q96JI7 RNU6-403P-201ENST00000363163 104 ntBASIC-1.05□□□□□ -2.58
SPG11Q96JI7 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.05□□□□□ -2.58
SPG11Q96JI7 MIR7-1-201ENST00000384871 110 ntBASIC-1.05□□□□□ -2.58
SPG11Q96JI7 MIR147A-201ENST00000385079 72 ntBASIC-1.05□□□□□ -2.58
SPG11Q96JI7 MIR507-201ENST00000385234 94 ntBASIC-1.05□□□□□ -2.58
SPG11Q96JI7 RNU2-62P-201ENST00000410868 191 ntBASIC-1.05□□□□□ -2.58
SPG11Q96JI7 MTND1P32-201ENST00000433043 938 ntBASIC-1.05□□□□□ -2.58
SPG11Q96JI7 AC245505.1-201ENST00000556398 224 ntBASIC-1.05□□□□□ -2.58
SPG11Q96JI7 AP001836.1-201ENST00000604675 523 ntBASIC-1.05□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms