Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 SNORD116.3-201ENST00000517176 78 ntBASIC0.82□□□□□ -2.28
VMP1Q96GC9 RN7SKP295-201ENST00000517264 153 ntBASIC0.82□□□□□ -2.28
VMP1Q96GC9 AL355375.2-201ENST00000574825 175 ntBASIC0.82□□□□□ -2.28
VMP1Q96GC9 AC084781.2-201ENST00000615568 161 ntBASIC0.82□□□□□ -2.28
VMP1Q96GC9 MIR4272-201ENST00000635924 64 ntBASIC0.82□□□□□ -2.28
VMP1Q96GC9 Y_RNA.70-201ENST00000362886 110 ntBASIC0.81□□□□□ -2.28
VMP1Q96GC9 Y_RNA.187-201ENST00000363918 113 ntBASIC0.81□□□□□ -2.28
VMP1Q96GC9 RNU6-1175P-201ENST00000365200 107 ntBASIC0.81□□□□□ -2.28
VMP1Q96GC9 Y_RNA.570-201ENST00000384750 101 ntBASIC0.81□□□□□ -2.28
VMP1Q96GC9 RPS26P5-201ENST00000418544 335 ntBASIC0.81□□□□□ -2.28
VMP1Q96GC9 HMGN2P32-201ENST00000444648 269 ntBASIC0.81□□□□□ -2.28
VMP1Q96GC9 Y_RNA.632-201ENST00000459189 102 ntBASIC0.81□□□□□ -2.28
VMP1Q96GC9 U7.7-201ENST00000459276 60 ntBASIC0.81□□□□□ -2.28
VMP1Q96GC9 AC091951.2-201ENST00000500762 203 ntBASIC0.81□□□□□ -2.28
VMP1Q96GC9 FGF7P4-201ENST00000509595 295 ntBASIC0.81□□□□□ -2.28
VMP1Q96GC9 AC109810.1-201ENST00000534066 224 ntBASIC0.81□□□□□ -2.28
VMP1Q96GC9 AC025627.3-201ENST00000582078 182 ntBASIC0.81□□□□□ -2.28
VMP1Q96GC9 AC013244.2-201ENST00000603396 103 ntBASIC0.81□□□□□ -2.28
VMP1Q96GC9 MIR373-201ENST00000362273 69 ntBASIC0.8□□□□□ -2.28
VMP1Q96GC9 RNU6-1115P-201ENST00000362490 106 ntBASIC0.8□□□□□ -2.28
VMP1Q96GC9 Y_RNA.329-201ENST00000365209 107 ntBASIC0.8□□□□□ -2.28
VMP1Q96GC9 RNU6-110P-201ENST00000384508 104 ntBASIC0.8□□□□□ -2.28
VMP1Q96GC9 MIR520E-201ENST00000384867 87 ntBASIC0.8□□□□□ -2.28
VMP1Q96GC9 RNU6-131P-201ENST00000391144 107 ntBASIC0.8□□□□□ -2.28
VMP1Q96GC9 MIR1185-1-201ENST00000408598 86 ntBASIC0.8□□□□□ -2.28
VMP1Q96GC9 AL390729.2-201ENST00000416137 156 ntBASIC0.8□□□□□ -2.28
VMP1Q96GC9 MCFD2P1-201ENST00000417812 300 ntBASIC0.8□□□□□ -2.28
VMP1Q96GC9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.8□□□□□ -2.28
VMP1Q96GC9 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.8□□□□□ -2.28
VMP1Q96GC9 AC113410.1-201ENST00000505029 247 ntBASIC0.8□□□□□ -2.28
VMP1Q96GC9 MIR4698-201ENST00000577795 80 ntBASIC0.8□□□□□ -2.28
VMP1Q96GC9 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.8□□□□□ -2.28
VMP1Q96GC9 MIR3973-201ENST00000579824 107 ntBASIC0.8□□□□□ -2.28
VMP1Q96GC9 MIR4423-201ENST00000580922 80 ntBASIC0.8□□□□□ -2.28
VMP1Q96GC9 RBM11P1-201ENST00000604951 799 ntBASIC0.8□□□□□ -2.28
VMP1Q96GC9 AC010205.1-201ENST00000616668 449 ntBASIC0.8□□□□□ -2.28
VMP1Q96GC9 AC091925.1-201ENST00000623204 462 ntBASIC0.8□□□□□ -2.28
VMP1Q96GC9 AC023934.1-201ENST00000574529 2389 ntBASIC0.8□□□□□ -2.28
VMP1Q96GC9 RNA5SP48-201ENST00000363969 126 ntBASIC0.79□□□□□ -2.28
VMP1Q96GC9 Y_RNA.303-201ENST00000364998 94 ntBASIC0.79□□□□□ -2.28
VMP1Q96GC9 SNORA72-201ENST00000384339 132 ntBASIC0.79□□□□□ -2.28
VMP1Q96GC9 RNU6-710P-201ENST00000410424 105 ntBASIC0.79□□□□□ -2.28
VMP1Q96GC9 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.79□□□□□ -2.28
VMP1Q96GC9 AC005042.3-201ENST00000453230 174 ntBASIC0.79□□□□□ -2.28
VMP1Q96GC9 SNORD19B-201ENST00000459623 84 ntBASIC0.79□□□□□ -2.28
VMP1Q96GC9 RNU6-351P-201ENST00000516097 100 ntBASIC0.79□□□□□ -2.28
VMP1Q96GC9 RNU6-875P-201ENST00000516488 106 ntBASIC0.79□□□□□ -2.28
VMP1Q96GC9 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.79□□□□□ -2.28
VMP1Q96GC9 FAM71BP1-201ENST00000604431 523 ntBASIC0.79□□□□□ -2.28
VMP1Q96GC9 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
VMP1Q96GC9 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
VMP1Q96GC9 Y_RNA.496-201ENST00000384444 101 ntBASIC0.78□□□□□ -2.28
VMP1Q96GC9 SNORD89-201ENST00000390981 114 ntBASIC0.78□□□□□ -2.28
VMP1Q96GC9 RNU6-855P-201ENST00000410395 104 ntBASIC0.78□□□□□ -2.28
VMP1Q96GC9 SNORD123-201ENST00000459473 70 ntBASIC0.78□□□□□ -2.28
VMP1Q96GC9 RPS29P1-201ENST00000465274 159 ntBASIC0.78□□□□□ -2.28
VMP1Q96GC9 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
VMP1Q96GC9 SNORD50B-201ENST00000364995 70 ntBASIC0.77□□□□□ -2.29
VMP1Q96GC9 Y_RNA.462-201ENST00000384268 102 ntBASIC0.77□□□□□ -2.29
VMP1Q96GC9 SNRPGP10-201ENST00000432323 225 ntBASIC0.77□□□□□ -2.29
VMP1Q96GC9 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.77□□□□□ -2.29
VMP1Q96GC9 RNU11-2P-201ENST00000516898 142 ntBASIC0.77□□□□□ -2.29
VMP1Q96GC9 MIR5188-201ENST00000583467 113 ntBASIC0.77□□□□□ -2.29
VMP1Q96GC9 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.77□□□□□ -2.29
VMP1Q96GC9 AC092447.9-201ENST00000603395 144 ntBASIC0.77□□□□□ -2.29
VMP1Q96GC9 Y_RNA.772-201ENST00000606692 102 ntBASIC0.77□□□□□ -2.29
VMP1Q96GC9 AC108706.1-201ENST00000611053 297 ntBASIC0.77□□□□□ -2.29
VMP1Q96GC9 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.77□□□□□ -2.29
VMP1Q96GC9 AL138825.1-201ENST00000618587 192 ntBASIC0.77□□□□□ -2.29
VMP1Q96GC9 AC104985.2-201ENST00000620598 500 ntBASIC0.77□□□□□ -2.29
VMP1Q96GC9 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
VMP1Q96GC9 Y_RNA.39-201ENST00000362620 98 ntBASIC0.76□□□□□ -2.29
VMP1Q96GC9 Y_RNA.252-201ENST00000364556 101 ntBASIC0.76□□□□□ -2.29
VMP1Q96GC9 Y_RNA.263-201ENST00000364659 114 ntBASIC0.76□□□□□ -2.29
VMP1Q96GC9 RNU1-115P-201ENST00000365329 160 ntBASIC0.76□□□□□ -2.29
VMP1Q96GC9 RNU6-1323P-201ENST00000384025 107 ntBASIC0.76□□□□□ -2.29
VMP1Q96GC9 Y_RNA.529-201ENST00000384586 119 ntBASIC0.76□□□□□ -2.29
VMP1Q96GC9 RNU6-1009P-201ENST00000390996 107 ntBASIC0.76□□□□□ -2.29
VMP1Q96GC9 AC236972.2-201ENST00000434979 310 ntBASIC0.76□□□□□ -2.29
VMP1Q96GC9 AC067940.1-201ENST00000458411 300 ntBASIC0.76□□□□□ -2.29
VMP1Q96GC9 COX6CP6-201ENST00000490840 228 ntBASIC0.76□□□□□ -2.29
VMP1Q96GC9 Y_RNA.661-201ENST00000516003 99 ntBASIC0.76□□□□□ -2.29
VMP1Q96GC9 RN7SKP164-201ENST00000516138 266 ntBASIC0.76□□□□□ -2.29
VMP1Q96GC9 RNU4-77P-201ENST00000516692 156 ntBASIC0.76□□□□□ -2.29
VMP1Q96GC9 AC106800.4-201ENST00000614905 153 ntBASIC0.76□□□□□ -2.29
VMP1Q96GC9 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.76□□□□□ -2.29
VMP1Q96GC9 AC068700.1-201ENST00000565862 3754 ntBASIC0.76□□□□□ -2.29
VMP1Q96GC9 Y_RNA.310-201ENST00000365063 113 ntBASIC0.75□□□□□ -2.29
VMP1Q96GC9 Y_RNA.331-201ENST00000365267 102 ntBASIC0.75□□□□□ -2.29
VMP1Q96GC9 Y_RNA.341-201ENST00000365341 102 ntBASIC0.75□□□□□ -2.29
VMP1Q96GC9 RNU6-1335P-201ENST00000365426 107 ntBASIC0.75□□□□□ -2.29
VMP1Q96GC9 Y_RNA.458-201ENST00000384240 102 ntBASIC0.75□□□□□ -2.29
VMP1Q96GC9 SNORD111-201ENST00000408139 94 ntBASIC0.75□□□□□ -2.29
VMP1Q96GC9 AC004941.2-201ENST00000427009 228 ntBASIC0.75□□□□□ -2.29
VMP1Q96GC9 AL160004.2-201ENST00000432935 350 ntBASIC0.75□□□□□ -2.29
VMP1Q96GC9 RNU6-1110P-201ENST00000516462 101 ntBASIC0.75□□□□□ -2.29
VMP1Q96GC9 SNORA40.14-201ENST00000516543 86 ntBASIC0.75□□□□□ -2.29
VMP1Q96GC9 RNU7-116P-201ENST00000516940 62 ntBASIC0.75□□□□□ -2.29
VMP1Q96GC9 AC093027.1-201ENST00000546698 429 ntBASIC0.75□□□□□ -2.29
VMP1Q96GC9 RPS29P30-201ENST00000600975 111 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 248.6 ms