Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 Y_RNA.432-201ENST00000384087 111 ntBASIC2.21□□□□□ -2.06
PTCD3Q96EY7 MIR513C-201ENST00000401352 84 ntBASIC2.21□□□□□ -2.06
PTCD3Q96EY7 RPL30P13-201ENST00000418873 348 ntBASIC2.21□□□□□ -2.06
PTCD3Q96EY7 CST2P1-201ENST00000425770 87 ntBASIC2.21□□□□□ -2.06
PTCD3Q96EY7 AC018634.1-201ENST00000437554 401 ntBASIC2.21□□□□□ -2.06
PTCD3Q96EY7 AC233266.1-201ENST00000454518 96 ntBASIC2.21□□□□□ -2.06
PTCD3Q96EY7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.21□□□□□ -2.06
PTCD3Q96EY7 RNU6-1299P-201ENST00000516316 100 ntBASIC2.21□□□□□ -2.06
PTCD3Q96EY7 RNU6-341P-201ENST00000516973 96 ntBASIC2.21□□□□□ -2.06
PTCD3Q96EY7 AC120024.3-201ENST00000603167 156 ntBASIC2.21□□□□□ -2.06
PTCD3Q96EY7 AC242852.1-201ENST00000612151 96 ntBASIC2.21□□□□□ -2.06
PTCD3Q96EY7 AC244015.1-201ENST00000622301 99 ntBASIC2.21□□□□□ -2.06
PTCD3Q96EY7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PTCD3Q96EY7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.2□□□□□ -2.06
PTCD3Q96EY7 MIR449A-201ENST00000362113 91 ntBASIC2.2□□□□□ -2.06
PTCD3Q96EY7 RNU6-199P-201ENST00000362954 107 ntBASIC2.2□□□□□ -2.06
PTCD3Q96EY7 Y_RNA.251-201ENST00000364551 99 ntBASIC2.2□□□□□ -2.06
PTCD3Q96EY7 Y_RNA.253-201ENST00000364562 112 ntBASIC2.2□□□□□ -2.06
PTCD3Q96EY7 RNU6-597P-201ENST00000365620 102 ntBASIC2.2□□□□□ -2.06
PTCD3Q96EY7 RNU6-1117P-201ENST00000384525 104 ntBASIC2.2□□□□□ -2.06
PTCD3Q96EY7 Y_RNA.542-201ENST00000384641 111 ntBASIC2.2□□□□□ -2.06
PTCD3Q96EY7 SNORD37.2-201ENST00000391075 66 ntBASIC2.2□□□□□ -2.06
PTCD3Q96EY7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.2□□□□□ -2.06
PTCD3Q96EY7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.2□□□□□ -2.06
PTCD3Q96EY7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.2□□□□□ -2.06
PTCD3Q96EY7 AL163195.1-201ENST00000496941 348 ntBASIC2.2□□□□□ -2.06
PTCD3Q96EY7 RNA5SP153-201ENST00000516498 76 ntBASIC2.2□□□□□ -2.06
PTCD3Q96EY7 MIR5694-201ENST00000581190 76 ntBASIC2.2□□□□□ -2.06
PTCD3Q96EY7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.2□□□□□ -2.06
PTCD3Q96EY7 MIR6840-201ENST00000611937 71 ntBASIC2.2□□□□□ -2.06
PTCD3Q96EY7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
PTCD3Q96EY7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
PTCD3Q96EY7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
PTCD3Q96EY7 Y_RNA.267-201ENST00000364679 109 ntBASIC2.19□□□□□ -2.06
PTCD3Q96EY7 Y_RNA.634-201ENST00000364811 113 ntBASIC2.19□□□□□ -2.06
PTCD3Q96EY7 RNA5SP138-201ENST00000365098 114 ntBASIC2.19□□□□□ -2.06
PTCD3Q96EY7 RNU6-1138P-201ENST00000365359 106 ntBASIC2.19□□□□□ -2.06
PTCD3Q96EY7 Y_RNA.420-201ENST00000384043 110 ntBASIC2.19□□□□□ -2.06
PTCD3Q96EY7 RNU6-22P-201ENST00000384355 107 ntBASIC2.19□□□□□ -2.06
PTCD3Q96EY7 SNORA8-201ENST00000384574 139 ntBASIC2.19□□□□□ -2.06
PTCD3Q96EY7 SNORA67.4-201ENST00000384688 142 ntBASIC2.19□□□□□ -2.06
PTCD3Q96EY7 SNORA40-201ENST00000388090 126 ntBASIC2.19□□□□□ -2.06
PTCD3Q96EY7 RNU6-460P-201ENST00000391158 108 ntBASIC2.19□□□□□ -2.06
PTCD3Q96EY7 SNORA79-201ENST00000408376 140 ntBASIC2.19□□□□□ -2.06
PTCD3Q96EY7 Y_RNA.621-201ENST00000411065 96 ntBASIC2.19□□□□□ -2.06
PTCD3Q96EY7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.19□□□□□ -2.06
PTCD3Q96EY7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.19□□□□□ -2.06
PTCD3Q96EY7 HMGN1P7-201ENST00000491722 313 ntBASIC2.19□□□□□ -2.06
PTCD3Q96EY7 RNU7-149P-201ENST00000516739 59 ntBASIC2.19□□□□□ -2.06
PTCD3Q96EY7 AC097639.2-201ENST00000603159 172 ntBASIC2.19□□□□□ -2.06
PTCD3Q96EY7 SNORD14A-201ENST00000606526 91 ntBASIC2.19□□□□□ -2.06
PTCD3Q96EY7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PTCD3Q96EY7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PTCD3Q96EY7 AC131280.1-202ENST00000624067 4211 ntBASIC2.18□□□□□ -2.06
PTCD3Q96EY7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PTCD3Q96EY7 SNORD115-3-201ENST00000363100 82 ntBASIC2.18□□□□□ -2.06
PTCD3Q96EY7 RNU6-23P-201ENST00000363283 107 ntBASIC2.18□□□□□ -2.06
PTCD3Q96EY7 Y_RNA.486-201ENST00000384398 107 ntBASIC2.18□□□□□ -2.06
PTCD3Q96EY7 HMGN2P38-201ENST00000423806 265 ntBASIC2.18□□□□□ -2.06
PTCD3Q96EY7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.18□□□□□ -2.06
PTCD3Q96EY7 TRBV12-1-201ENST00000479785 344 ntBASIC2.18□□□□□ -2.06
PTCD3Q96EY7 AC024995.1-201ENST00000523014 93 ntBASIC2.18□□□□□ -2.06
PTCD3Q96EY7 AC026271.5-201ENST00000577873 130 ntBASIC2.18□□□□□ -2.06
PTCD3Q96EY7 MIR4435-1-201ENST00000582552 80 ntBASIC2.18□□□□□ -2.06
PTCD3Q96EY7 Pinc.1-201ENST00000616452 154 ntBASIC2.18□□□□□ -2.06
PTCD3Q96EY7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.18□□□□□ -2.06
PTCD3Q96EY7 RNU1-58P-201ENST00000362413 163 ntBASIC2.17□□□□□ -2.06
PTCD3Q96EY7 SNORA1B-201ENST00000362535 133 ntBASIC2.17□□□□□ -2.06
PTCD3Q96EY7 SNORA12.1-201ENST00000390873 148 ntBASIC2.17□□□□□ -2.06
PTCD3Q96EY7 RNA5SP323-201ENST00000391094 133 ntBASIC2.17□□□□□ -2.06
PTCD3Q96EY7 SNORA75.5-201ENST00000391291 81 ntBASIC2.17□□□□□ -2.06
PTCD3Q96EY7 BX510359.4-201ENST00000423750 193 ntBASIC2.17□□□□□ -2.06
PTCD3Q96EY7 AL606517.2-201ENST00000442855 241 ntBASIC2.17□□□□□ -2.06
PTCD3Q96EY7 AC023449.1-201ENST00000454464 154 ntBASIC2.17□□□□□ -2.06
PTCD3Q96EY7 RN7SL429P-201ENST00000479090 223 ntBASIC2.17□□□□□ -2.06
PTCD3Q96EY7 RN7SL489P-201ENST00000486185 223 ntBASIC2.17□□□□□ -2.06
PTCD3Q96EY7 RN7SL327P-201ENST00000488659 223 ntBASIC2.17□□□□□ -2.06
PTCD3Q96EY7 OR9P1P-201ENST00000496431 281 ntBASIC2.17□□□□□ -2.06
PTCD3Q96EY7 RNA5SP281-201ENST00000516504 135 ntBASIC2.17□□□□□ -2.06
PTCD3Q96EY7 RNU6-971P-201ENST00000516920 106 ntBASIC2.17□□□□□ -2.06
PTCD3Q96EY7 AL358944.1-201ENST00000528537 144 ntBASIC2.17□□□□□ -2.06
PTCD3Q96EY7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.17□□□□□ -2.06
PTCD3Q96EY7 AC022217.4-201ENST00000604389 163 ntBASIC2.17□□□□□ -2.06
PTCD3Q96EY7 JPX_2.1-201ENST00000614161 69 ntBASIC2.17□□□□□ -2.06
PTCD3Q96EY7 AL365222.1-201ENST00000614661 98 ntBASIC2.17□□□□□ -2.06
PTCD3Q96EY7 RN7SL853P-201ENST00000617250 223 ntBASIC2.17□□□□□ -2.06
PTCD3Q96EY7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.17□□□□□ -2.06
PTCD3Q96EY7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
PTCD3Q96EY7 AL596028.1-201ENST00000326971 197 ntBASIC2.16□□□□□ -2.06
PTCD3Q96EY7 RNA5SP289-201ENST00000362332 137 ntBASIC2.16□□□□□ -2.06
PTCD3Q96EY7 RNU1-91P-201ENST00000364746 163 ntBASIC2.16□□□□□ -2.06
PTCD3Q96EY7 SNORA6-201ENST00000384033 151 ntBASIC2.16□□□□□ -2.06
PTCD3Q96EY7 MIR515-2-201ENST00000384883 83 ntBASIC2.16□□□□□ -2.06
PTCD3Q96EY7 MIR515-1-201ENST00000384884 83 ntBASIC2.16□□□□□ -2.06
PTCD3Q96EY7 RNU11-5P-201ENST00000391216 129 ntBASIC2.16□□□□□ -2.06
PTCD3Q96EY7 RNU2-70P-201ENST00000410718 179 ntBASIC2.16□□□□□ -2.06
PTCD3Q96EY7 SNRPGP10-201ENST00000432323 225 ntBASIC2.16□□□□□ -2.06
PTCD3Q96EY7 AL021397.1-201ENST00000451806 248 ntBASIC2.16□□□□□ -2.06
PTCD3Q96EY7 MRPS17P9-201ENST00000511924 393 ntBASIC2.16□□□□□ -2.06
PTCD3Q96EY7 AL591926.4-201ENST00000616895 298 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 815.2 ms