Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RNU6-437P-201ENST00000459408 95 ntBASIC2.15□□□□□ -2.07
CHMP4CQ96CF2 AC103810.8-201ENST00000607347 118 ntBASIC2.15□□□□□ -2.07
CHMP4CQ96CF2 AC021506.2-201ENST00000612354 169 ntBASIC2.15□□□□□ -2.07
CHMP4CQ96CF2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CHMP4CQ96CF2 SNORD68-201ENST00000363214 84 ntBASIC2.14□□□□□ -2.07
CHMP4CQ96CF2 Y_RNA.277-201ENST00000364754 102 ntBASIC2.14□□□□□ -2.07
CHMP4CQ96CF2 Y_RNA.293-201ENST00000364908 93 ntBASIC2.14□□□□□ -2.07
CHMP4CQ96CF2 Y_RNA.416-201ENST00000384014 113 ntBASIC2.14□□□□□ -2.07
CHMP4CQ96CF2 RPL31P63-201ENST00000422565 375 ntBASIC2.14□□□□□ -2.07
CHMP4CQ96CF2 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.14□□□□□ -2.07
CHMP4CQ96CF2 MIR5692C2-201ENST00000577959 77 ntBASIC2.14□□□□□ -2.07
CHMP4CQ96CF2 BX284668.6-201ENST00000606899 438 ntBASIC2.14□□□□□ -2.07
CHMP4CQ96CF2 AL008718.3-201ENST00000610217 321 ntBASIC2.14□□□□□ -2.07
CHMP4CQ96CF2 AC073349.3-201ENST00000617616 186 ntBASIC2.14□□□□□ -2.07
CHMP4CQ96CF2 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CHMP4CQ96CF2 SNORD27-201ENST00000363981 72 ntBASIC2.13□□□□□ -2.07
CHMP4CQ96CF2 Y_RNA.203-201ENST00000364106 102 ntBASIC2.13□□□□□ -2.07
CHMP4CQ96CF2 RNU4-41P-201ENST00000364426 143 ntBASIC2.13□□□□□ -2.07
CHMP4CQ96CF2 Y_RNA.253-201ENST00000364562 112 ntBASIC2.13□□□□□ -2.07
CHMP4CQ96CF2 RNU6-144P-201ENST00000383951 107 ntBASIC2.13□□□□□ -2.07
CHMP4CQ96CF2 Y_RNA.401-201ENST00000383965 117 ntBASIC2.13□□□□□ -2.07
CHMP4CQ96CF2 RNU6-211P-201ENST00000384047 107 ntBASIC2.13□□□□□ -2.07
CHMP4CQ96CF2 Y_RNA.477-201ENST00000384352 108 ntBASIC2.13□□□□□ -2.07
CHMP4CQ96CF2 MIR30A-201ENST00000385092 71 ntBASIC2.13□□□□□ -2.07
CHMP4CQ96CF2 JPX_2.1-201ENST00000614161 69 ntBASIC2.13□□□□□ -2.07
CHMP4CQ96CF2 AL591926.4-201ENST00000616895 298 ntBASIC2.13□□□□□ -2.07
CHMP4CQ96CF2 MIR126-201ENST00000362291 85 ntBASIC2.12□□□□□ -2.07
CHMP4CQ96CF2 Y_RNA.82-201ENST00000363000 102 ntBASIC2.12□□□□□ -2.07
CHMP4CQ96CF2 Y_RNA.92-201ENST00000363043 102 ntBASIC2.12□□□□□ -2.07
CHMP4CQ96CF2 Y_RNA.235-201ENST00000364412 102 ntBASIC2.12□□□□□ -2.07
CHMP4CQ96CF2 Y_RNA.306-201ENST00000365015 102 ntBASIC2.12□□□□□ -2.07
CHMP4CQ96CF2 Y_RNA.312-201ENST00000365089 102 ntBASIC2.12□□□□□ -2.07
CHMP4CQ96CF2 Y_RNA.322-201ENST00000365151 102 ntBASIC2.12□□□□□ -2.07
CHMP4CQ96CF2 Y_RNA.478-201ENST00000384358 107 ntBASIC2.12□□□□□ -2.07
CHMP4CQ96CF2 Y_RNA.618-201ENST00000410949 107 ntBASIC2.12□□□□□ -2.07
CHMP4CQ96CF2 Y_RNA.650-201ENST00000459002 102 ntBASIC2.12□□□□□ -2.07
CHMP4CQ96CF2 SNORD13-201ENST00000459299 104 ntBASIC2.12□□□□□ -2.07
CHMP4CQ96CF2 HMGN1P7-201ENST00000491722 313 ntBASIC2.12□□□□□ -2.07
CHMP4CQ96CF2 OR9P1P-201ENST00000496431 281 ntBASIC2.12□□□□□ -2.07
CHMP4CQ96CF2 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.12□□□□□ -2.07
CHMP4CQ96CF2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.12□□□□□ -2.07
CHMP4CQ96CF2 Y_RNA.777-201ENST00000516982 102 ntBASIC2.12□□□□□ -2.07
CHMP4CQ96CF2 Y_RNA.714-201ENST00000517065 90 ntBASIC2.12□□□□□ -2.07
CHMP4CQ96CF2 MIR4419B-201ENST00000577260 68 ntBASIC2.12□□□□□ -2.07
CHMP4CQ96CF2 MIR2681-201ENST00000581814 105 ntBASIC2.12□□□□□ -2.07
CHMP4CQ96CF2 Y_RNA.771-201ENST00000598668 102 ntBASIC2.12□□□□□ -2.07
CHMP4CQ96CF2 Y_RNA.789-201ENST00000622480 102 ntBASIC2.12□□□□□ -2.07
CHMP4CQ96CF2 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
CHMP4CQ96CF2 MIR367-201ENST00000362299 68 ntBASIC2.11□□□□□ -2.07
CHMP4CQ96CF2 AL627390.1-201ENST00000396055 340 ntBASIC2.11□□□□□ -2.07
CHMP4CQ96CF2 MLLT10P1-201ENST00000418346 262 ntBASIC2.11□□□□□ -2.07
CHMP4CQ96CF2 RPL30P13-201ENST00000418873 348 ntBASIC2.11□□□□□ -2.07
CHMP4CQ96CF2 AC099513.1-201ENST00000490423 301 ntBASIC2.11□□□□□ -2.07
CHMP4CQ96CF2 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.11□□□□□ -2.07
CHMP4CQ96CF2 AL513423.1-201ENST00000621695 132 ntBASIC2.11□□□□□ -2.07
CHMP4CQ96CF2 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CHMP4CQ96CF2 RNU6-1123P-201ENST00000362347 106 ntBASIC2.1□□□□□ -2.07
CHMP4CQ96CF2 RNU6-674P-201ENST00000363831 107 ntBASIC2.1□□□□□ -2.07
CHMP4CQ96CF2 Y_RNA.307-201ENST00000365022 117 ntBASIC2.1□□□□□ -2.07
CHMP4CQ96CF2 RNU6-203P-201ENST00000384038 104 ntBASIC2.1□□□□□ -2.07
CHMP4CQ96CF2 SNORA17.3-201ENST00000391159 129 ntBASIC2.1□□□□□ -2.07
CHMP4CQ96CF2 SNORA26.9-201ENST00000391322 122 ntBASIC2.1□□□□□ -2.07
CHMP4CQ96CF2 PGBD4P5-201ENST00000445958 426 ntBASIC2.1□□□□□ -2.07
CHMP4CQ96CF2 Y_RNA.673-201ENST00000516306 88 ntBASIC2.1□□□□□ -2.07
CHMP4CQ96CF2 SNORA25.15-201ENST00000516487 89 ntBASIC2.1□□□□□ -2.07
CHMP4CQ96CF2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.1□□□□□ -2.07
CHMP4CQ96CF2 MIR3198-2-201ENST00000577868 80 ntBASIC2.1□□□□□ -2.07
CHMP4CQ96CF2 MIR3128-201ENST00000581957 66 ntBASIC2.1□□□□□ -2.07
CHMP4CQ96CF2 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.1□□□□□ -2.07
CHMP4CQ96CF2 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.1□□□□□ -2.07
CHMP4CQ96CF2 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
CHMP4CQ96CF2 Y_RNA.447-201ENST00000384184 113 ntBASIC2.09□□□□□ -2.07
CHMP4CQ96CF2 SNORA12.1-201ENST00000390873 148 ntBASIC2.09□□□□□ -2.07
CHMP4CQ96CF2 RNU6-482P-201ENST00000391068 107 ntBASIC2.09□□□□□ -2.07
CHMP4CQ96CF2 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.09□□□□□ -2.07
CHMP4CQ96CF2 CALM2P4-201ENST00000430810 426 ntBASIC2.09□□□□□ -2.07
CHMP4CQ96CF2 SNRPGP10-201ENST00000432323 225 ntBASIC2.09□□□□□ -2.07
CHMP4CQ96CF2 Z98949.2-201ENST00000440996 144 ntBASIC2.09□□□□□ -2.07
CHMP4CQ96CF2 SNORD2.1-201ENST00000458762 69 ntBASIC2.09□□□□□ -2.07
CHMP4CQ96CF2 snoU13.9-201ENST00000458927 103 ntBASIC2.09□□□□□ -2.07
CHMP4CQ96CF2 RNA5SP168-201ENST00000516642 112 ntBASIC2.09□□□□□ -2.07
CHMP4CQ96CF2 MIR4724-201ENST00000579485 89 ntBASIC2.09□□□□□ -2.07
CHMP4CQ96CF2 AC006006.1-201ENST00000603082 144 ntBASIC2.09□□□□□ -2.07
CHMP4CQ96CF2 SNORD3E-202ENST00000627253 216 ntBASIC2.09□□□□□ -2.07
CHMP4CQ96CF2 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.09□□□□□ -2.08
CHMP4CQ96CF2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
CHMP4CQ96CF2 MIR424-201ENST00000362227 98 ntBASIC2.08□□□□□ -2.08
CHMP4CQ96CF2 Y_RNA.122-201ENST00000363331 96 ntBASIC2.08□□□□□ -2.08
CHMP4CQ96CF2 SNORA20.1-201ENST00000364790 130 ntBASIC2.08□□□□□ -2.08
CHMP4CQ96CF2 RNU6-131P-201ENST00000391144 107 ntBASIC2.08□□□□□ -2.08
CHMP4CQ96CF2 AC004965.1-201ENST00000413033 213 ntBASIC2.08□□□□□ -2.08
CHMP4CQ96CF2 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.08□□□□□ -2.08
CHMP4CQ96CF2 MIR3122-201ENST00000577243 73 ntBASIC2.08□□□□□ -2.08
CHMP4CQ96CF2 Y_RNA.802-201ENST00000614892 130 ntBASIC2.08□□□□□ -2.08
CHMP4CQ96CF2 AC095038.3-201ENST00000634439 195 ntBASIC2.08□□□□□ -2.08
CHMP4CQ96CF2 Y_RNA.20-201ENST00000362479 113 ntBASIC2.07□□□□□ -2.08
CHMP4CQ96CF2 RNA5SP190-201ENST00000365222 118 ntBASIC2.07□□□□□ -2.08
CHMP4CQ96CF2 RNU6-424P-201ENST00000384367 105 ntBASIC2.07□□□□□ -2.08
CHMP4CQ96CF2 Y_RNA.489-201ENST00000384410 101 ntBASIC2.07□□□□□ -2.08
CHMP4CQ96CF2 U8.16-201ENST00000391279 133 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms