Protein–RNA interactions for Protein: Q8NEL0

CCDC54, Coiled-coil domain-containing protein 54, humanhuman

Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54Q8NEL0 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.72□□□□□ -2.29
CCDC54Q8NEL0 AC005042.3-201ENST00000453230 174 ntBASIC0.72□□□□□ -2.29
CCDC54Q8NEL0 COX6CP14-201ENST00000469580 174 ntBASIC0.72□□□□□ -2.29
CCDC54Q8NEL0 HMGN1P7-201ENST00000491722 313 ntBASIC0.72□□□□□ -2.29
CCDC54Q8NEL0 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.72□□□□□ -2.29
CCDC54Q8NEL0 PSMC1P5-201ENST00000512850 177 ntBASIC0.72□□□□□ -2.29
CCDC54Q8NEL0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.72□□□□□ -2.29
CCDC54Q8NEL0 AC106800.4-201ENST00000614905 153 ntBASIC0.72□□□□□ -2.29
CCDC54Q8NEL0 AL606534.2-204ENST00000635008 178 ntBASIC0.72□□□□□ -2.29
CCDC54Q8NEL0 RNA5SP264-201ENST00000363115 107 ntBASIC0.71□□□□□ -2.3
CCDC54Q8NEL0 Y_RNA.331-201ENST00000365267 102 ntBASIC0.71□□□□□ -2.3
CCDC54Q8NEL0 Y_RNA.356-201ENST00000365475 113 ntBASIC0.71□□□□□ -2.3
CCDC54Q8NEL0 RNU6-1323P-201ENST00000384025 107 ntBASIC0.71□□□□□ -2.3
CCDC54Q8NEL0 MIR452-201ENST00000385020 85 ntBASIC0.71□□□□□ -2.3
CCDC54Q8NEL0 MIR100-201ENST00000385259 80 ntBASIC0.71□□□□□ -2.3
CCDC54Q8NEL0 MIR1278-201ENST00000408753 81 ntBASIC0.71□□□□□ -2.3
CCDC54Q8NEL0 AC006461.1-201ENST00000412637 326 ntBASIC0.71□□□□□ -2.3
CCDC54Q8NEL0 SNORA18.7-201ENST00000516910 131 ntBASIC0.71□□□□□ -2.3
CCDC54Q8NEL0 AC024405.2-202ENST00000532731 184 ntBASIC0.71□□□□□ -2.3
CCDC54Q8NEL0 MIR4795-201ENST00000584182 89 ntBASIC0.71□□□□□ -2.3
CCDC54Q8NEL0 MIR4781-201ENST00000585250 76 ntBASIC0.71□□□□□ -2.3
CCDC54Q8NEL0 AC136443.5-201ENST00000603741 370 ntBASIC0.71□□□□□ -2.3
CCDC54Q8NEL0 AC133104.2-201ENST00000615272 193 ntBASIC0.71□□□□□ -2.3
CCDC54Q8NEL0 RNU4-73P-201ENST00000363164 141 ntBASIC0.7□□□□□ -2.3
CCDC54Q8NEL0 Y_RNA.143-201ENST00000363520 106 ntBASIC0.7□□□□□ -2.3
CCDC54Q8NEL0 RNU6-801P-201ENST00000364087 105 ntBASIC0.7□□□□□ -2.3
CCDC54Q8NEL0 Y_RNA.796-201ENST00000364268 102 ntBASIC0.7□□□□□ -2.3
CCDC54Q8NEL0 Y_RNA.799-201ENST00000364992 102 ntBASIC0.7□□□□□ -2.3
CCDC54Q8NEL0 RNU1-115P-201ENST00000365329 160 ntBASIC0.7□□□□□ -2.3
CCDC54Q8NEL0 Y_RNA.341-201ENST00000365341 102 ntBASIC0.7□□□□□ -2.3
CCDC54Q8NEL0 RNU6-53P-201ENST00000365367 106 ntBASIC0.7□□□□□ -2.3
CCDC54Q8NEL0 Y_RNA.462-201ENST00000384268 102 ntBASIC0.7□□□□□ -2.3
CCDC54Q8NEL0 Y_RNA.551-201ENST00000384661 102 ntBASIC0.7□□□□□ -2.3
CCDC54Q8NEL0 RNU6-1105P-201ENST00000384774 107 ntBASIC0.7□□□□□ -2.3
CCDC54Q8NEL0 HMGN1P10-201ENST00000474557 553 ntBASIC0.7□□□□□ -2.3
CCDC54Q8NEL0 AC117454.1-201ENST00000491120 168 ntBASIC0.7□□□□□ -2.3
CCDC54Q8NEL0 RNU7-115P-201ENST00000516433 55 ntBASIC0.7□□□□□ -2.3
CCDC54Q8NEL0 RNU6-197P-201ENST00000516680 100 ntBASIC0.7□□□□□ -2.3
CCDC54Q8NEL0 MIR4764-201ENST00000580680 88 ntBASIC0.7□□□□□ -2.3
CCDC54Q8NEL0 AP003357.1-201ENST00000604497 148 ntBASIC0.7□□□□□ -2.3
CCDC54Q8NEL0 MIR6866-201ENST00000638146 69 ntBASIC0.7□□□□□ -2.3
CCDC54Q8NEL0 Y_RNA.31-201ENST00000362574 102 ntBASIC0.69□□□□□ -2.3
CCDC54Q8NEL0 RNU6-102P-201ENST00000384485 104 ntBASIC0.69□□□□□ -2.3
CCDC54Q8NEL0 Y_RNA.645-201ENST00000391229 102 ntBASIC0.69□□□□□ -2.3
CCDC54Q8NEL0 AL035398.1-201ENST00000430869 322 ntBASIC0.69□□□□□ -2.3
CCDC54Q8NEL0 AL160004.2-201ENST00000432935 350 ntBASIC0.69□□□□□ -2.3
CCDC54Q8NEL0 MTND5P20-201ENST00000448677 143 ntBASIC0.69□□□□□ -2.3
CCDC54Q8NEL0 RPL39P39-201ENST00000455840 151 ntBASIC0.69□□□□□ -2.3
CCDC54Q8NEL0 SNORD123-201ENST00000459473 70 ntBASIC0.69□□□□□ -2.3
CCDC54Q8NEL0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.69□□□□□ -2.3
CCDC54Q8NEL0 RNU6-237P-201ENST00000515985 71 ntBASIC0.69□□□□□ -2.3
CCDC54Q8NEL0 SNORA40.14-201ENST00000516543 86 ntBASIC0.69□□□□□ -2.3
CCDC54Q8NEL0 AC127455.1-201ENST00000565496 145 ntBASIC0.69□□□□□ -2.3
CCDC54Q8NEL0 MIR548S-201ENST00000581352 82 ntBASIC0.69□□□□□ -2.3
CCDC54Q8NEL0 MIR4801-201ENST00000582704 82 ntBASIC0.69□□□□□ -2.3
CCDC54Q8NEL0 MIR4769-201ENST00000584126 77 ntBASIC0.69□□□□□ -2.3
CCDC54Q8NEL0 POLR3GP1-201ENST00000594073 261 ntBASIC0.69□□□□□ -2.3
CCDC54Q8NEL0 AL121655.1-201ENST00000605811 308 ntBASIC0.69□□□□□ -2.3
CCDC54Q8NEL0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
CCDC54Q8NEL0 uc_338.22-201ENST00000622722 187 ntBASIC0.69□□□□□ -2.3
CCDC54Q8NEL0 RNU6-1209P-201ENST00000363655 107 ntBASIC0.68□□□□□ -2.3
CCDC54Q8NEL0 SNORD114-24-201ENST00000365029 72 ntBASIC0.68□□□□□ -2.3
CCDC54Q8NEL0 Y_RNA.418-201ENST00000384029 102 ntBASIC0.68□□□□□ -2.3
CCDC54Q8NEL0 Y_RNA.419-201ENST00000384041 102 ntBASIC0.68□□□□□ -2.3
CCDC54Q8NEL0 Y_RNA.456-201ENST00000384232 111 ntBASIC0.68□□□□□ -2.3
CCDC54Q8NEL0 SNORD63-201ENST00000384262 68 ntBASIC0.68□□□□□ -2.3
CCDC54Q8NEL0 MIR136-201ENST00000385207 82 ntBASIC0.68□□□□□ -2.3
CCDC54Q8NEL0 SNORA26.5-201ENST00000391215 123 ntBASIC0.68□□□□□ -2.3
CCDC54Q8NEL0 AL603910.2-201ENST00000407268 136 ntBASIC0.68□□□□□ -2.3
CCDC54Q8NEL0 AL392103.1-201ENST00000447000 198 ntBASIC0.68□□□□□ -2.3
CCDC54Q8NEL0 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.68□□□□□ -2.3
CCDC54Q8NEL0 PDCD5P2-201ENST00000507570 312 ntBASIC0.68□□□□□ -2.3
CCDC54Q8NEL0 RNU6-1046P-201ENST00000516538 107 ntBASIC0.68□□□□□ -2.3
CCDC54Q8NEL0 AC022616.4-201ENST00000522985 181 ntBASIC0.68□□□□□ -2.3
CCDC54Q8NEL0 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.68□□□□□ -2.3
CCDC54Q8NEL0 MIR548AR-201ENST00000582191 57 ntBASIC0.68□□□□□ -2.3
CCDC54Q8NEL0 AC131055.1-201ENST00000584626 316 ntBASIC0.68□□□□□ -2.3
CCDC54Q8NEL0 AL359821.1-201ENST00000605519 182 ntBASIC0.68□□□□□ -2.3
CCDC54Q8NEL0 Y_RNA.105-201ENST00000363182 111 ntBASIC0.67□□□□□ -2.3
CCDC54Q8NEL0 Y_RNA.148-201ENST00000363557 117 ntBASIC0.67□□□□□ -2.3
CCDC54Q8NEL0 Y_RNA.197-201ENST00000364004 102 ntBASIC0.67□□□□□ -2.3
CCDC54Q8NEL0 Y_RNA.203-201ENST00000364106 102 ntBASIC0.67□□□□□ -2.3
CCDC54Q8NEL0 RNU6-654P-201ENST00000364373 107 ntBASIC0.67□□□□□ -2.3
CCDC54Q8NEL0 Y_RNA.394-201ENST00000383942 103 ntBASIC0.67□□□□□ -2.3
CCDC54Q8NEL0 MIR520C-201ENST00000385005 87 ntBASIC0.67□□□□□ -2.3
CCDC54Q8NEL0 RNU6-308P-201ENST00000390957 107 ntBASIC0.67□□□□□ -2.3
CCDC54Q8NEL0 SNORD72-201ENST00000390994 80 ntBASIC0.67□□□□□ -2.3
CCDC54Q8NEL0 RNU6-1009P-201ENST00000390996 107 ntBASIC0.67□□□□□ -2.3
CCDC54Q8NEL0 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
CCDC54Q8NEL0 AC004941.2-201ENST00000427009 228 ntBASIC0.67□□□□□ -2.3
CCDC54Q8NEL0 RNU7-90P-201ENST00000459216 62 ntBASIC0.67□□□□□ -2.3
CCDC54Q8NEL0 MTND3P22-201ENST00000510932 243 ntBASIC0.67□□□□□ -2.3
CCDC54Q8NEL0 RNA5SP255-201ENST00000516370 107 ntBASIC0.67□□□□□ -2.3
CCDC54Q8NEL0 RNU6-113P-201ENST00000516653 101 ntBASIC0.67□□□□□ -2.3
CCDC54Q8NEL0 Y_RNA.702-201ENST00000516843 96 ntBASIC0.67□□□□□ -2.3
CCDC54Q8NEL0 AC136628.3-201ENST00000521868 290 ntBASIC0.67□□□□□ -2.3
CCDC54Q8NEL0 AC023827.1-201ENST00000569247 97 ntBASIC0.67□□□□□ -2.3
CCDC54Q8NEL0 AL080274.1-201ENST00000605565 220 ntBASIC0.67□□□□□ -2.3
CCDC54Q8NEL0 LARP7P1-201ENST00000605576 316 ntBASIC0.67□□□□□ -2.3
CCDC54Q8NEL0 AC023934.1-201ENST00000574529 2389 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms