Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 RNU6-1281P-201ENST00000516223 105 ntBASIC-0.05□□□□□ -2.42
CCDC112Q8NEF3 RNU6-830P-201ENST00000516353 107 ntBASIC-0.05□□□□□ -2.42
CCDC112Q8NEF3 AC105029.1-201ENST00000520250 669 ntBASIC-0.05□□□□□ -2.42
CCDC112Q8NEF3 MIR4760-201ENST00000585040 80 ntBASIC-0.05□□□□□ -2.42
CCDC112Q8NEF3 MTND1P7-201ENST00000632801 297 ntBASIC-0.05□□□□□ -2.42
CCDC112Q8NEF3 MIR411-201ENST00000362239 96 ntBASIC-0.06□□□□□ -2.42
CCDC112Q8NEF3 RNU6-451P-201ENST00000362921 107 ntBASIC-0.06□□□□□ -2.42
CCDC112Q8NEF3 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.06□□□□□ -2.42
CCDC112Q8NEF3 RNU6-1119P-201ENST00000384349 108 ntBASIC-0.06□□□□□ -2.42
CCDC112Q8NEF3 RNU6-125P-201ENST00000384505 107 ntBASIC-0.06□□□□□ -2.42
CCDC112Q8NEF3 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.06□□□□□ -2.42
CCDC112Q8NEF3 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.06□□□□□ -2.42
CCDC112Q8NEF3 SNRPGP14-201ENST00000435400 219 ntBASIC-0.06□□□□□ -2.42
CCDC112Q8NEF3 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.06□□□□□ -2.42
CCDC112Q8NEF3 RNU7-87P-201ENST00000459343 62 ntBASIC-0.06□□□□□ -2.42
CCDC112Q8NEF3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.06□□□□□ -2.42
CCDC112Q8NEF3 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.06□□□□□ -2.42
CCDC112Q8NEF3 AC005014.2-201ENST00000607795 599 ntBASIC-0.06□□□□□ -2.42
CCDC112Q8NEF3 AC004467.1-201ENST00000615678 330 ntBASIC-0.06□□□□□ -2.42
CCDC112Q8NEF3 RNA5SP214-201ENST00000363378 118 ntBASIC-0.07□□□□□ -2.42
CCDC112Q8NEF3 SNORA51.10-201ENST00000384418 136 ntBASIC-0.07□□□□□ -2.42
CCDC112Q8NEF3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
CCDC112Q8NEF3 AL031003.1-201ENST00000404229 172 ntBASIC-0.07□□□□□ -2.42
CCDC112Q8NEF3 RNU2-61P-201ENST00000411069 191 ntBASIC-0.07□□□□□ -2.42
CCDC112Q8NEF3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.07□□□□□ -2.42
CCDC112Q8NEF3 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.07□□□□□ -2.42
CCDC112Q8NEF3 AL353997.1-201ENST00000432936 108 ntBASIC-0.07□□□□□ -2.42
CCDC112Q8NEF3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.07□□□□□ -2.42
CCDC112Q8NEF3 U8.19-201ENST00000459095 133 ntBASIC-0.07□□□□□ -2.42
CCDC112Q8NEF3 Y_RNA.717-201ENST00000517106 92 ntBASIC-0.07□□□□□ -2.42
CCDC112Q8NEF3 AC055872.1-201ENST00000570978 278 ntBASIC-0.07□□□□□ -2.42
CCDC112Q8NEF3 NBR2-204ENST00000587322 63 ntBASIC-0.07□□□□□ -2.42
CCDC112Q8NEF3 AC018638.8-201ENST00000588755 281 ntBASIC-0.07□□□□□ -2.42
CCDC112Q8NEF3 AC090582.1-201ENST00000636321 199 ntBASIC-0.07□□□□□ -2.42
CCDC112Q8NEF3 RNY3P3-201ENST00000363816 102 ntBASIC-0.08□□□□□ -2.42
CCDC112Q8NEF3 RNU6-259P-201ENST00000383999 107 ntBASIC-0.08□□□□□ -2.42
CCDC112Q8NEF3 SNORA72-201ENST00000384339 132 ntBASIC-0.08□□□□□ -2.42
CCDC112Q8NEF3 SNORA8.2-201ENST00000384372 139 ntBASIC-0.08□□□□□ -2.42
CCDC112Q8NEF3 U8.17-201ENST00000391292 132 ntBASIC-0.08□□□□□ -2.42
CCDC112Q8NEF3 BTF3P11-201ENST00000426582 477 ntBASIC-0.08□□□□□ -2.42
CCDC112Q8NEF3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.08□□□□□ -2.42
CCDC112Q8NEF3 RNA5SP395-201ENST00000516567 118 ntBASIC-0.08□□□□□ -2.42
CCDC112Q8NEF3 RNU6-1088P-201ENST00000516850 104 ntBASIC-0.08□□□□□ -2.42
CCDC112Q8NEF3 Y_RNA.704-201ENST00000516851 102 ntBASIC-0.08□□□□□ -2.42
CCDC112Q8NEF3 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.08□□□□□ -2.42
CCDC112Q8NEF3 AC090897.1-201ENST00000580909 226 ntBASIC-0.08□□□□□ -2.42
CCDC112Q8NEF3 MIR4264-201ENST00000583520 66 ntBASIC-0.08□□□□□ -2.42
CCDC112Q8NEF3 AP000753.3-201ENST00000604083 169 ntBASIC-0.08□□□□□ -2.42
CCDC112Q8NEF3 AC005972.2-201ENST00000604690 348 ntBASIC-0.08□□□□□ -2.42
CCDC112Q8NEF3 MIR4791-201ENST00000607666 84 ntBASIC-0.08□□□□□ -2.42
CCDC112Q8NEF3 Pinc.1-201ENST00000616452 154 ntBASIC-0.08□□□□□ -2.42
CCDC112Q8NEF3 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.09□□□□□ -2.42
CCDC112Q8NEF3 SNORD14E-201ENST00000364009 85 ntBASIC-0.09□□□□□ -2.42
CCDC112Q8NEF3 SNORD38C-201ENST00000384381 69 ntBASIC-0.09□□□□□ -2.42
CCDC112Q8NEF3 SNORA75.6-201ENST00000391318 127 ntBASIC-0.09□□□□□ -2.42
CCDC112Q8NEF3 MTCO2P33-201ENST00000402100 465 ntBASIC-0.09□□□□□ -2.42
CCDC112Q8NEF3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.09□□□□□ -2.42
CCDC112Q8NEF3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-0.09□□□□□ -2.42
CCDC112Q8NEF3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-0.09□□□□□ -2.42
CCDC112Q8NEF3 AC011352.1-201ENST00000512300 793 ntBASIC-0.09□□□□□ -2.42
CCDC112Q8NEF3 RNU2-13P-201ENST00000515909 113 ntBASIC-0.09□□□□□ -2.42
CCDC112Q8NEF3 RNU6-864P-201ENST00000516256 108 ntBASIC-0.09□□□□□ -2.42
CCDC112Q8NEF3 AC112693.2-201ENST00000556538 232 ntBASIC-0.09□□□□□ -2.42
CCDC112Q8NEF3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.09□□□□□ -2.42
CCDC112Q8NEF3 AC008608.1-201ENST00000603910 127 ntBASIC-0.09□□□□□ -2.42
CCDC112Q8NEF3 MIR6759-201ENST00000638110 65 ntBASIC-0.09□□□□□ -2.42
CCDC112Q8NEF3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.09□□□□□ -2.42
CCDC112Q8NEF3 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.1□□□□□ -2.43
CCDC112Q8NEF3 Y_RNA.77-201ENST00000362962 107 ntBASIC-0.1□□□□□ -2.43
CCDC112Q8NEF3 RNU6-961P-201ENST00000363893 105 ntBASIC-0.1□□□□□ -2.43
CCDC112Q8NEF3 RNU6-700P-201ENST00000391043 107 ntBASIC-0.1□□□□□ -2.43
CCDC112Q8NEF3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.1□□□□□ -2.43
CCDC112Q8NEF3 MIR938-201ENST00000401216 83 ntBASIC-0.1□□□□□ -2.43
CCDC112Q8NEF3 SNORD12B-201ENST00000410433 91 ntBASIC-0.1□□□□□ -2.43
CCDC112Q8NEF3 RNU2-66P-201ENST00000410650 161 ntBASIC-0.1□□□□□ -2.43
CCDC112Q8NEF3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.1□□□□□ -2.43
CCDC112Q8NEF3 MTND1P17-201ENST00000448961 204 ntBASIC-0.1□□□□□ -2.43
CCDC112Q8NEF3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.1□□□□□ -2.43
CCDC112Q8NEF3 RPL23AP54-201ENST00000495129 419 ntBASIC-0.1□□□□□ -2.43
CCDC112Q8NEF3 RNU6-408P-201ENST00000515910 100 ntBASIC-0.1□□□□□ -2.43
CCDC112Q8NEF3 MIR4290-201ENST00000583807 95 ntBASIC-0.1□□□□□ -2.43
CCDC112Q8NEF3 uc_338.6-201ENST00000613544 171 ntBASIC-0.1□□□□□ -2.43
CCDC112Q8NEF3 uc_338.4-201ENST00000616635 176 ntBASIC-0.1□□□□□ -2.43
CCDC112Q8NEF3 uc_338.16-201ENST00000621804 95 ntBASIC-0.1□□□□□ -2.43
CCDC112Q8NEF3 AL391262.2-201ENST00000622466 494 ntBASIC-0.1□□□□□ -2.43
CCDC112Q8NEF3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.1□□□□□ -2.43
CCDC112Q8NEF3 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.11□□□□□ -2.43
CCDC112Q8NEF3 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
CCDC112Q8NEF3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.11□□□□□ -2.43
CCDC112Q8NEF3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.11□□□□□ -2.43
CCDC112Q8NEF3 RNA5SP227-201ENST00000516184 113 ntBASIC-0.11□□□□□ -2.43
CCDC112Q8NEF3 RNU1-54P-201ENST00000517181 120 ntBASIC-0.11□□□□□ -2.43
CCDC112Q8NEF3 RNU7-181P-201ENST00000517234 74 ntBASIC-0.11□□□□□ -2.43
CCDC112Q8NEF3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.11□□□□□ -2.43
CCDC112Q8NEF3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.11□□□□□ -2.43
CCDC112Q8NEF3 MIR3678-201ENST00000578455 94 ntBASIC-0.11□□□□□ -2.43
CCDC112Q8NEF3 MIR6128-201ENST00000615528 109 ntBASIC-0.11□□□□□ -2.43
CCDC112Q8NEF3 AC240442.1-201ENST00000616055 283 ntBASIC-0.11□□□□□ -2.43
CCDC112Q8NEF3 RNU6-268P-201ENST00000364174 107 ntBASIC-0.12□□□□□ -2.43
CCDC112Q8NEF3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms