Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AP002004.2-201ENST00000531656 154 ntBASIC2.5□□□□□ -2.01
TRIM48Q8IWZ4 MIR4662B-201ENST00000579498 81 ntBASIC2.5□□□□□ -2.01
TRIM48Q8IWZ4 RNU1-58P-201ENST00000362413 163 ntBASIC2.49□□□□□ -2.01
TRIM48Q8IWZ4 RNU6-235P-201ENST00000362644 107 ntBASIC2.49□□□□□ -2.01
TRIM48Q8IWZ4 RNU6-508P-201ENST00000363231 103 ntBASIC2.49□□□□□ -2.01
TRIM48Q8IWZ4 RNA5SP205-201ENST00000364653 136 ntBASIC2.49□□□□□ -2.01
TRIM48Q8IWZ4 SNORA1-201ENST00000384107 130 ntBASIC2.49□□□□□ -2.01
TRIM48Q8IWZ4 RNU6-80P-201ENST00000384195 107 ntBASIC2.49□□□□□ -2.01
TRIM48Q8IWZ4 SNORD61-201ENST00000384252 73 ntBASIC2.49□□□□□ -2.01
TRIM48Q8IWZ4 MIR515-2-201ENST00000384883 83 ntBASIC2.49□□□□□ -2.01
TRIM48Q8IWZ4 MIR515-1-201ENST00000384884 83 ntBASIC2.49□□□□□ -2.01
TRIM48Q8IWZ4 MIR522-201ENST00000385071 87 ntBASIC2.49□□□□□ -2.01
TRIM48Q8IWZ4 SNORA26-201ENST00000391286 122 ntBASIC2.49□□□□□ -2.01
TRIM48Q8IWZ4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.49□□□□□ -2.01
TRIM48Q8IWZ4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.49□□□□□ -2.01
TRIM48Q8IWZ4 RNU7-94P-201ENST00000459576 63 ntBASIC2.49□□□□□ -2.01
TRIM48Q8IWZ4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.49□□□□□ -2.01
TRIM48Q8IWZ4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.49□□□□□ -2.01
TRIM48Q8IWZ4 AC008507.4-201ENST00000585464 127 ntBASIC2.49□□□□□ -2.01
TRIM48Q8IWZ4 AL359881.1-201ENST00000602916 267 ntBASIC2.49□□□□□ -2.01
TRIM48Q8IWZ4 U7.2-201ENST00000607576 63 ntBASIC2.49□□□□□ -2.01
TRIM48Q8IWZ4 U4.3-201ENST00000621047 82 ntBASIC2.49□□□□□ -2.01
TRIM48Q8IWZ4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.49□□□□□ -2.01
TRIM48Q8IWZ4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TRIM48Q8IWZ4 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.49□□□□□ -2.01
TRIM48Q8IWZ4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TRIM48Q8IWZ4 RNU4-82P-201ENST00000362443 140 ntBASIC2.48□□□□□ -2.01
TRIM48Q8IWZ4 SNORA38-201ENST00000363946 132 ntBASIC2.48□□□□□ -2.01
TRIM48Q8IWZ4 DEFA7P-201ENST00000382676 285 ntBASIC2.48□□□□□ -2.01
TRIM48Q8IWZ4 MIR27B-201ENST00000385129 97 ntBASIC2.48□□□□□ -2.01
TRIM48Q8IWZ4 AL513328.1-201ENST00000446460 224 ntBASIC2.48□□□□□ -2.01
TRIM48Q8IWZ4 RNU5E-3P-201ENST00000515913 68 ntBASIC2.48□□□□□ -2.01
TRIM48Q8IWZ4 SNORA18.4-201ENST00000516440 124 ntBASIC2.48□□□□□ -2.01
TRIM48Q8IWZ4 RNU6-504P-201ENST00000516568 104 ntBASIC2.48□□□□□ -2.01
TRIM48Q8IWZ4 RNU1-104P-201ENST00000517280 175 ntBASIC2.48□□□□□ -2.01
TRIM48Q8IWZ4 AL358944.1-201ENST00000528537 144 ntBASIC2.48□□□□□ -2.01
TRIM48Q8IWZ4 MIR3129-201ENST00000581095 76 ntBASIC2.48□□□□□ -2.01
TRIM48Q8IWZ4 AC131055.1-201ENST00000584626 316 ntBASIC2.48□□□□□ -2.01
TRIM48Q8IWZ4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.48□□□□□ -2.01
TRIM48Q8IWZ4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
TRIM48Q8IWZ4 AC080100.1-201ENST00000624239 5356 ntBASIC2.47□□□□□ -2.01
TRIM48Q8IWZ4 SNORD50B-201ENST00000364995 70 ntBASIC2.47□□□□□ -2.01
TRIM48Q8IWZ4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
TRIM48Q8IWZ4 RNU11-3P-201ENST00000391111 133 ntBASIC2.47□□□□□ -2.01
TRIM48Q8IWZ4 RNA5SP508-201ENST00000411327 119 ntBASIC2.47□□□□□ -2.01
TRIM48Q8IWZ4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.47□□□□□ -2.01
TRIM48Q8IWZ4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.47□□□□□ -2.01
TRIM48Q8IWZ4 AC245047.3-201ENST00000429428 127 ntBASIC2.47□□□□□ -2.01
TRIM48Q8IWZ4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.47□□□□□ -2.01
TRIM48Q8IWZ4 MIR5094-201ENST00000578766 85 ntBASIC2.47□□□□□ -2.01
TRIM48Q8IWZ4 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.47□□□□□ -2.01
TRIM48Q8IWZ4 AC010297.1-201ENST00000623948 149 ntBASIC2.47□□□□□ -2.01
TRIM48Q8IWZ4 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.47□□□□□ -2.01
TRIM48Q8IWZ4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
TRIM48Q8IWZ4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.01
TRIM48Q8IWZ4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.01
TRIM48Q8IWZ4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.46□□□□□ -2.02
TRIM48Q8IWZ4 HMGN2P35-201ENST00000412164 270 ntBASIC2.46□□□□□ -2.02
TRIM48Q8IWZ4 MTATP6P29-201ENST00000415057 132 ntBASIC2.46□□□□□ -2.02
TRIM48Q8IWZ4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM48Q8IWZ4 FTH1P12-201ENST00000432137 551 ntBASIC2.46□□□□□ -2.02
TRIM48Q8IWZ4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM48Q8IWZ4 RNU6-693P-201ENST00000516134 107 ntBASIC2.46□□□□□ -2.02
TRIM48Q8IWZ4 RNA5SP320-201ENST00000516263 124 ntBASIC2.46□□□□□ -2.02
TRIM48Q8IWZ4 SNORA31.15-201ENST00000516771 132 ntBASIC2.46□□□□□ -2.02
TRIM48Q8IWZ4 RNU2-60P-201ENST00000517290 128 ntBASIC2.46□□□□□ -2.02
TRIM48Q8IWZ4 AC084364.2-201ENST00000546924 395 ntBASIC2.46□□□□□ -2.02
TRIM48Q8IWZ4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM48Q8IWZ4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.46□□□□□ -2.02
TRIM48Q8IWZ4 RNU6-1084P-201ENST00000362498 107 ntBASIC2.45□□□□□ -2.02
TRIM48Q8IWZ4 MIR29C-201ENST00000385231 88 ntBASIC2.45□□□□□ -2.02
TRIM48Q8IWZ4 SNORA11.4-201ENST00000408823 129 ntBASIC2.45□□□□□ -2.02
TRIM48Q8IWZ4 RNA5SP181-201ENST00000410246 98 ntBASIC2.45□□□□□ -2.02
TRIM48Q8IWZ4 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.45□□□□□ -2.02
TRIM48Q8IWZ4 RNU6-659P-201ENST00000516454 104 ntBASIC2.45□□□□□ -2.02
TRIM48Q8IWZ4 RNU6-126P-201ENST00000516685 103 ntBASIC2.45□□□□□ -2.02
TRIM48Q8IWZ4 MIR5092-201ENST00000583139 88 ntBASIC2.45□□□□□ -2.02
TRIM48Q8IWZ4 CTSLP2-204ENST00000629029 392 ntBASIC2.45□□□□□ -2.02
TRIM48Q8IWZ4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.45□□□□□ -2.02
TRIM48Q8IWZ4 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
TRIM48Q8IWZ4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
TRIM48Q8IWZ4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TRIM48Q8IWZ4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
TRIM48Q8IWZ4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.44□□□□□ -2.02
TRIM48Q8IWZ4 Y_RNA.120-201ENST00000363304 110 ntBASIC2.44□□□□□ -2.02
TRIM48Q8IWZ4 RNU6-309P-201ENST00000364573 106 ntBASIC2.44□□□□□ -2.02
TRIM48Q8IWZ4 Y_RNA.265-201ENST00000364677 108 ntBASIC2.44□□□□□ -2.02
TRIM48Q8IWZ4 SNORD18B-201ENST00000365659 72 ntBASIC2.44□□□□□ -2.02
TRIM48Q8IWZ4 SNORD20-201ENST00000384550 80 ntBASIC2.44□□□□□ -2.02
TRIM48Q8IWZ4 MIR802-201ENST00000390235 94 ntBASIC2.44□□□□□ -2.02
TRIM48Q8IWZ4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
TRIM48Q8IWZ4 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.44□□□□□ -2.02
TRIM48Q8IWZ4 Y_RNA.692-201ENST00000516627 105 ntBASIC2.44□□□□□ -2.02
TRIM48Q8IWZ4 Y_RNA.714-201ENST00000517065 90 ntBASIC2.44□□□□□ -2.02
TRIM48Q8IWZ4 AC091544.4-201ENST00000555268 342 ntBASIC2.44□□□□□ -2.02
TRIM48Q8IWZ4 AC005786.1-201ENST00000588553 154 ntBASIC2.44□□□□□ -2.02
TRIM48Q8IWZ4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.44□□□□□ -2.02
TRIM48Q8IWZ4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TRIM48Q8IWZ4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
TRIM48Q8IWZ4 Y_RNA.52-201ENST00000362760 96 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms