Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RNU6-1096P-201ENST00000517089 102 ntBASIC1.83□□□□□ -2.12
HERC6Q8IVU3 MIR4643-201ENST00000577473 78 ntBASIC1.83□□□□□ -2.12
HERC6Q8IVU3 AC091178.2-201ENST00000584401 117 ntBASIC1.83□□□□□ -2.12
HERC6Q8IVU3 AC005972.2-201ENST00000604690 348 ntBASIC1.83□□□□□ -2.12
HERC6Q8IVU3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.83□□□□□ -2.12
HERC6Q8IVU3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.83□□□□□ -2.12
HERC6Q8IVU3 SNORD33-201ENST00000362761 85 ntBASIC1.82□□□□□ -2.12
HERC6Q8IVU3 Y_RNA.341-201ENST00000365341 102 ntBASIC1.82□□□□□ -2.12
HERC6Q8IVU3 Y_RNA.447-201ENST00000384184 113 ntBASIC1.82□□□□□ -2.12
HERC6Q8IVU3 Y_RNA.456-201ENST00000384232 111 ntBASIC1.82□□□□□ -2.12
HERC6Q8IVU3 PGBD4P5-201ENST00000445958 426 ntBASIC1.82□□□□□ -2.12
HERC6Q8IVU3 MTND4LP30-201ENST00000454092 297 ntBASIC1.82□□□□□ -2.12
HERC6Q8IVU3 RNU6-191P-201ENST00000516295 94 ntBASIC1.82□□□□□ -2.12
HERC6Q8IVU3 MIR3122-201ENST00000577243 73 ntBASIC1.82□□□□□ -2.12
HERC6Q8IVU3 MIR4419B-201ENST00000577260 68 ntBASIC1.82□□□□□ -2.12
HERC6Q8IVU3 MIR3128-201ENST00000581957 66 ntBASIC1.82□□□□□ -2.12
HERC6Q8IVU3 AL645939.4-201ENST00000604495 135 ntBASIC1.82□□□□□ -2.12
HERC6Q8IVU3 AC037487.3-201ENST00000606668 112 ntBASIC1.82□□□□□ -2.12
HERC6Q8IVU3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.82□□□□□ -2.12
HERC6Q8IVU3 U6.104-201ENST00000637979 90 ntBASIC1.82□□□□□ -2.12
HERC6Q8IVU3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
HERC6Q8IVU3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
HERC6Q8IVU3 RNU6-1123P-201ENST00000362347 106 ntBASIC1.81□□□□□ -2.12
HERC6Q8IVU3 Y_RNA.401-201ENST00000383965 117 ntBASIC1.81□□□□□ -2.12
HERC6Q8IVU3 Y_RNA.477-201ENST00000384352 108 ntBASIC1.81□□□□□ -2.12
HERC6Q8IVU3 RNA5SP482-201ENST00000391269 118 ntBASIC1.81□□□□□ -2.12
HERC6Q8IVU3 Y_RNA.621-201ENST00000411065 96 ntBASIC1.81□□□□□ -2.12
HERC6Q8IVU3 RPL30P13-201ENST00000418873 348 ntBASIC1.81□□□□□ -2.12
HERC6Q8IVU3 AL049830.1-201ENST00000468034 425 ntBASIC1.81□□□□□ -2.12
HERC6Q8IVU3 SNORA31.10-201ENST00000516482 106 ntBASIC1.81□□□□□ -2.12
HERC6Q8IVU3 SNORD53B-201ENST00000577887 78 ntBASIC1.81□□□□□ -2.12
HERC6Q8IVU3 MIR3618-201ENST00000580330 88 ntBASIC1.81□□□□□ -2.12
HERC6Q8IVU3 AC006006.1-201ENST00000603082 144 ntBASIC1.81□□□□□ -2.12
HERC6Q8IVU3 MIR6504-201ENST00000613520 61 ntBASIC1.81□□□□□ -2.12
HERC6Q8IVU3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.81□□□□□ -2.12
HERC6Q8IVU3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
HERC6Q8IVU3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
HERC6Q8IVU3 ICE2P2-201ENST00000483823 2787 ntBASIC1.81□□□□□ -2.12
HERC6Q8IVU3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
HERC6Q8IVU3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.8□□□□□ -2.12
HERC6Q8IVU3 MIR424-201ENST00000362227 98 ntBASIC1.8□□□□□ -2.12
HERC6Q8IVU3 RNU1-42P-201ENST00000364033 160 ntBASIC1.8□□□□□ -2.12
HERC6Q8IVU3 Y_RNA.350-201ENST00000365409 98 ntBASIC1.8□□□□□ -2.12
HERC6Q8IVU3 AL603910.2-201ENST00000407268 136 ntBASIC1.8□□□□□ -2.12
HERC6Q8IVU3 RNU6-651P-201ENST00000411040 105 ntBASIC1.8□□□□□ -2.12
HERC6Q8IVU3 STAG3L5P-204ENST00000443759 179 ntBASIC1.8□□□□□ -2.12
HERC6Q8IVU3 HSPE1P24-201ENST00000450782 238 ntBASIC1.8□□□□□ -2.12
HERC6Q8IVU3 AC091959.1-201ENST00000495857 238 ntBASIC1.8□□□□□ -2.12
HERC6Q8IVU3 RNU6-1291P-201ENST00000516591 104 ntBASIC1.8□□□□□ -2.12
HERC6Q8IVU3 RNU7-116P-201ENST00000516940 62 ntBASIC1.8□□□□□ -2.12
HERC6Q8IVU3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.8□□□□□ -2.12
HERC6Q8IVU3 CBX3P4-201ENST00000538909 354 ntBASIC1.8□□□□□ -2.12
HERC6Q8IVU3 AC015720.1-201ENST00000565251 277 ntBASIC1.8□□□□□ -2.12
HERC6Q8IVU3 AC073349.3-201ENST00000617616 186 ntBASIC1.8□□□□□ -2.12
HERC6Q8IVU3 RNU6-801P-201ENST00000364087 105 ntBASIC1.79□□□□□ -2.12
HERC6Q8IVU3 Y_RNA.539-201ENST00000384635 107 ntBASIC1.79□□□□□ -2.12
HERC6Q8IVU3 SNORA53-201ENST00000391141 249 ntBASIC1.79□□□□□ -2.12
HERC6Q8IVU3 RPL39P38-201ENST00000467018 153 ntBASIC1.79□□□□□ -2.12
HERC6Q8IVU3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.79□□□□□ -2.12
HERC6Q8IVU3 SNORA27.4-201ENST00000516650 95 ntBASIC1.79□□□□□ -2.12
HERC6Q8IVU3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.79□□□□□ -2.12
HERC6Q8IVU3 SNORA77B-201ENST00000578179 125 ntBASIC1.79□□□□□ -2.12
HERC6Q8IVU3 MIR4422-201ENST00000581938 83 ntBASIC1.79□□□□□ -2.12
HERC6Q8IVU3 AC021506.2-201ENST00000612354 169 ntBASIC1.79□□□□□ -2.12
HERC6Q8IVU3 Y_RNA.60-201ENST00000362831 98 ntBASIC1.78□□□□□ -2.12
HERC6Q8IVU3 Y_RNA.188-201ENST00000363952 111 ntBASIC1.78□□□□□ -2.12
HERC6Q8IVU3 RNU6-740P-201ENST00000364734 105 ntBASIC1.78□□□□□ -2.12
HERC6Q8IVU3 Y_RNA.277-201ENST00000364754 102 ntBASIC1.78□□□□□ -2.12
HERC6Q8IVU3 RNU6-60P-201ENST00000364792 103 ntBASIC1.78□□□□□ -2.12
HERC6Q8IVU3 SNORD48-201ENST00000364953 64 ntBASIC1.78□□□□□ -2.12
HERC6Q8IVU3 Y_RNA.310-201ENST00000365063 113 ntBASIC1.78□□□□□ -2.12
HERC6Q8IVU3 Y_RNA.368-201ENST00000365547 113 ntBASIC1.78□□□□□ -2.12
HERC6Q8IVU3 RNU6-662P-201ENST00000384253 104 ntBASIC1.78□□□□□ -2.12
HERC6Q8IVU3 MT-TG-201ENST00000387429 68 ntBASIC1.78□□□□□ -2.12
HERC6Q8IVU3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.78□□□□□ -2.12
HERC6Q8IVU3 HSPE1P21-201ENST00000438283 308 ntBASIC1.78□□□□□ -2.12
HERC6Q8IVU3 RPS20P10-201ENST00000451209 253 ntBASIC1.78□□□□□ -2.12
HERC6Q8IVU3 RNU6-1271P-201ENST00000517049 105 ntBASIC1.78□□□□□ -2.12
HERC6Q8IVU3 AC024614.2-201ENST00000577584 372 ntBASIC1.78□□□□□ -2.12
HERC6Q8IVU3 SNORA4-201ENST00000584302 138 ntBASIC1.78□□□□□ -2.12
HERC6Q8IVU3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.78□□□□□ -2.12
HERC6Q8IVU3 AL513423.1-201ENST00000621695 132 ntBASIC1.78□□□□□ -2.12
HERC6Q8IVU3 MIR8063-201ENST00000621930 81 ntBASIC1.78□□□□□ -2.12
HERC6Q8IVU3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
HERC6Q8IVU3 SNORA1B-201ENST00000362535 133 ntBASIC1.77□□□□□ -2.13
HERC6Q8IVU3 Y_RNA.44-201ENST00000362676 108 ntBASIC1.77□□□□□ -2.13
HERC6Q8IVU3 Y_RNA.117-201ENST00000363294 101 ntBASIC1.77□□□□□ -2.13
HERC6Q8IVU3 RNU6-379P-201ENST00000363813 104 ntBASIC1.77□□□□□ -2.13
HERC6Q8IVU3 Y_RNA.217-201ENST00000364214 105 ntBASIC1.77□□□□□ -2.13
HERC6Q8IVU3 Y_RNA.352-201ENST00000365439 102 ntBASIC1.77□□□□□ -2.13
HERC6Q8IVU3 Y_RNA.416-201ENST00000384014 113 ntBASIC1.77□□□□□ -2.13
HERC6Q8IVU3 RNU6-203P-201ENST00000384038 104 ntBASIC1.77□□□□□ -2.13
HERC6Q8IVU3 SNORD116-13-201ENST00000384408 92 ntBASIC1.77□□□□□ -2.13
HERC6Q8IVU3 RNU2-14P-201ENST00000411053 191 ntBASIC1.77□□□□□ -2.13
HERC6Q8IVU3 RPL31P63-201ENST00000422565 375 ntBASIC1.77□□□□□ -2.13
HERC6Q8IVU3 Y_RNA.641-201ENST00000459414 105 ntBASIC1.77□□□□□ -2.13
HERC6Q8IVU3 Y_RNA.637-201ENST00000459424 114 ntBASIC1.77□□□□□ -2.13
HERC6Q8IVU3 AC011604.1-201ENST00000545978 196 ntBASIC1.77□□□□□ -2.13
HERC6Q8IVU3 AC004832.4-201ENST00000608952 331 ntBASIC1.77□□□□□ -2.13
HERC6Q8IVU3 U2.14-201ENST00000615943 113 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms