Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.32□□□□□ -2.04
VRK3Q8IV63 CYP2C59P-201ENST00000457790 269 ntBASIC2.32□□□□□ -2.04
VRK3Q8IV63 Y_RNA.651-201ENST00000459380 103 ntBASIC2.32□□□□□ -2.04
VRK3Q8IV63 RN7SL636P-201ENST00000497504 294 ntBASIC2.32□□□□□ -2.04
VRK3Q8IV63 SNORA4.4-201ENST00000515921 135 ntBASIC2.32□□□□□ -2.04
VRK3Q8IV63 RNU7-99P-201ENST00000516271 62 ntBASIC2.32□□□□□ -2.04
VRK3Q8IV63 AC133485.4-201ENST00000561835 220 ntBASIC2.32□□□□□ -2.04
VRK3Q8IV63 AC138907.4-201ENST00000570107 226 ntBASIC2.32□□□□□ -2.04
VRK3Q8IV63 MIR4679-2-201ENST00000578358 77 ntBASIC2.32□□□□□ -2.04
VRK3Q8IV63 AL670379.3-201ENST00000605040 251 ntBASIC2.32□□□□□ -2.04
VRK3Q8IV63 CTSLP2-204ENST00000629029 392 ntBASIC2.32□□□□□ -2.04
VRK3Q8IV63 MIR6073-201ENST00000352083 89 ntBASIC2.31□□□□□ -2.04
VRK3Q8IV63 MIR449A-201ENST00000362113 91 ntBASIC2.31□□□□□ -2.04
VRK3Q8IV63 Y_RNA.43-201ENST00000362670 111 ntBASIC2.31□□□□□ -2.04
VRK3Q8IV63 RNU6-147P-201ENST00000383983 107 ntBASIC2.31□□□□□ -2.04
VRK3Q8IV63 SUMO1P4-201ENST00000429430 302 ntBASIC2.31□□□□□ -2.04
VRK3Q8IV63 HMGN2P34-201ENST00000437647 269 ntBASIC2.31□□□□□ -2.04
VRK3Q8IV63 RPS29P21-201ENST00000496272 170 ntBASIC2.31□□□□□ -2.04
VRK3Q8IV63 RN7SKP19-201ENST00000516016 252 ntBASIC2.31□□□□□ -2.04
VRK3Q8IV63 RNU6-1061P-201ENST00000516530 99 ntBASIC2.31□□□□□ -2.04
VRK3Q8IV63 RNU6-504P-201ENST00000516568 104 ntBASIC2.31□□□□□ -2.04
VRK3Q8IV63 RNU6-365P-201ENST00000517113 106 ntBASIC2.31□□□□□ -2.04
VRK3Q8IV63 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.31□□□□□ -2.04
VRK3Q8IV63 MIR3199-1-201ENST00000582434 88 ntBASIC2.31□□□□□ -2.04
VRK3Q8IV63 MIR5194-201ENST00000582634 120 ntBASIC2.31□□□□□ -2.04
VRK3Q8IV63 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.31□□□□□ -2.04
VRK3Q8IV63 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.31□□□□□ -2.04
VRK3Q8IV63 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VRK3Q8IV63 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.3□□□□□ -2.04
VRK3Q8IV63 RNU4-82P-201ENST00000362443 140 ntBASIC2.3□□□□□ -2.04
VRK3Q8IV63 RNA5SP236-201ENST00000516169 116 ntBASIC2.3□□□□□ -2.04
VRK3Q8IV63 RNU6-781P-201ENST00000516377 101 ntBASIC2.3□□□□□ -2.04
VRK3Q8IV63 SNORA18.4-201ENST00000516440 124 ntBASIC2.3□□□□□ -2.04
VRK3Q8IV63 SNORA31.11-201ENST00000516528 139 ntBASIC2.3□□□□□ -2.04
VRK3Q8IV63 JPX_2.1-201ENST00000614161 69 ntBASIC2.3□□□□□ -2.04
VRK3Q8IV63 U6.108-201ENST00000637764 58 ntBASIC2.3□□□□□ -2.04
VRK3Q8IV63 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.3□□□□□ -2.04
VRK3Q8IV63 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
VRK3Q8IV63 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.29□□□□□ -2.04
VRK3Q8IV63 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VRK3Q8IV63 SNORD24-201ENST00000383884 75 ntBASIC2.29□□□□□ -2.04
VRK3Q8IV63 SNORA1-201ENST00000384107 130 ntBASIC2.29□□□□□ -2.04
VRK3Q8IV63 SNORD116-21-201ENST00000384507 92 ntBASIC2.29□□□□□ -2.04
VRK3Q8IV63 RNA5SP181-201ENST00000410246 98 ntBASIC2.29□□□□□ -2.04
VRK3Q8IV63 RPS15AP28-201ENST00000435088 386 ntBASIC2.29□□□□□ -2.04
VRK3Q8IV63 AL353689.1-201ENST00000438895 199 ntBASIC2.29□□□□□ -2.04
VRK3Q8IV63 HMGN1P7-201ENST00000491722 313 ntBASIC2.29□□□□□ -2.04
VRK3Q8IV63 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.29□□□□□ -2.04
VRK3Q8IV63 AC011406.1-201ENST00000512440 370 ntBASIC2.29□□□□□ -2.04
VRK3Q8IV63 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.29□□□□□ -2.04
VRK3Q8IV63 AL358944.1-201ENST00000528537 144 ntBASIC2.29□□□□□ -2.04
VRK3Q8IV63 AL022345.2-201ENST00000606307 135 ntBASIC2.29□□□□□ -2.04
VRK3Q8IV63 AC018630.2-201ENST00000534866 2403 ntBASIC2.29□□□□□ -2.04
VRK3Q8IV63 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
VRK3Q8IV63 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VRK3Q8IV63 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.28□□□□□ -2.04
VRK3Q8IV63 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
VRK3Q8IV63 Y_RNA.35-201ENST00000362601 101 ntBASIC2.28□□□□□ -2.04
VRK3Q8IV63 snoU2-30.2-201ENST00000362805 70 ntBASIC2.28□□□□□ -2.04
VRK3Q8IV63 RNU6-888P-201ENST00000363010 101 ntBASIC2.28□□□□□ -2.04
VRK3Q8IV63 RNU6-743P-201ENST00000364151 106 ntBASIC2.28□□□□□ -2.04
VRK3Q8IV63 SNORD114-30-201ENST00000364448 72 ntBASIC2.28□□□□□ -2.04
VRK3Q8IV63 Y_RNA.309-201ENST00000365046 111 ntBASIC2.28□□□□□ -2.04
VRK3Q8IV63 SNORD61-201ENST00000384252 73 ntBASIC2.28□□□□□ -2.04
VRK3Q8IV63 MIR548A3-201ENST00000385297 97 ntBASIC2.28□□□□□ -2.04
VRK3Q8IV63 MIR1253-201ENST00000408273 105 ntBASIC2.28□□□□□ -2.04
VRK3Q8IV63 AF228730.3-201ENST00000436691 102 ntBASIC2.28□□□□□ -2.04
VRK3Q8IV63 MTATP6P21-201ENST00000440681 189 ntBASIC2.28□□□□□ -2.04
VRK3Q8IV63 AC018868.1-201ENST00000491307 315 ntBASIC2.28□□□□□ -2.04
VRK3Q8IV63 MRPS17P9-201ENST00000511924 393 ntBASIC2.28□□□□□ -2.04
VRK3Q8IV63 RNU6-1146P-201ENST00000516282 102 ntBASIC2.28□□□□□ -2.04
VRK3Q8IV63 RNA5SP402-201ENST00000517148 110 ntBASIC2.28□□□□□ -2.04
VRK3Q8IV63 AC073413.2-201ENST00000604332 360 ntBASIC2.28□□□□□ -2.04
VRK3Q8IV63 AL353149.1-201ENST00000610667 244 ntBASIC2.28□□□□□ -2.04
VRK3Q8IV63 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.28□□□□□ -2.04
VRK3Q8IV63 Y_RNA.253-201ENST00000364562 112 ntBASIC2.27□□□□□ -2.05
VRK3Q8IV63 Y_RNA.346-201ENST00000365385 112 ntBASIC2.27□□□□□ -2.05
VRK3Q8IV63 RNU6-301P-201ENST00000384277 107 ntBASIC2.27□□□□□ -2.05
VRK3Q8IV63 RNU11-5P-201ENST00000391216 129 ntBASIC2.27□□□□□ -2.05
VRK3Q8IV63 AL021397.1-201ENST00000451806 248 ntBASIC2.27□□□□□ -2.05
VRK3Q8IV63 RN7SL429P-201ENST00000479090 223 ntBASIC2.27□□□□□ -2.05
VRK3Q8IV63 RN7SL489P-201ENST00000486185 223 ntBASIC2.27□□□□□ -2.05
VRK3Q8IV63 RN7SL327P-201ENST00000488659 223 ntBASIC2.27□□□□□ -2.05
VRK3Q8IV63 AC023141.11-201ENST00000508864 202 ntBASIC2.27□□□□□ -2.05
VRK3Q8IV63 RNU6-991P-201ENST00000516168 107 ntBASIC2.27□□□□□ -2.05
VRK3Q8IV63 RPPH1-2P-201ENST00000516688 293 ntBASIC2.27□□□□□ -2.05
VRK3Q8IV63 RNU6-341P-201ENST00000516973 96 ntBASIC2.27□□□□□ -2.05
VRK3Q8IV63 RNA5SP170-201ENST00000517150 101 ntBASIC2.27□□□□□ -2.05
VRK3Q8IV63 IGKV1-22-201ENST00000524313 326 ntBASIC2.27□□□□□ -2.05
VRK3Q8IV63 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.27□□□□□ -2.05
VRK3Q8IV63 AC008507.4-201ENST00000585464 127 ntBASIC2.27□□□□□ -2.05
VRK3Q8IV63 AC007229.1-201ENST00000590455 412 ntBASIC2.27□□□□□ -2.05
VRK3Q8IV63 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.27□□□□□ -2.05
VRK3Q8IV63 AL137847.3-201ENST00000611521 109 ntBASIC2.27□□□□□ -2.05
VRK3Q8IV63 RN7SL853P-201ENST00000617250 223 ntBASIC2.27□□□□□ -2.05
VRK3Q8IV63 MIR338-201ENST00000636369 67 ntBASIC2.27□□□□□ -2.05
VRK3Q8IV63 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.27□□□□□ -2.05
VRK3Q8IV63 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
VRK3Q8IV63 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VRK3Q8IV63 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms