Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 SNORA64-201ENST00000384674 134 ntBASIC2.35□□□□□ -2.03
LRRTM3Q86VH5 RNU6-131P-201ENST00000391144 107 ntBASIC2.35□□□□□ -2.03
LRRTM3Q86VH5 AL023284.1-201ENST00000403956 276 ntBASIC2.35□□□□□ -2.03
LRRTM3Q86VH5 RNA5SP181-201ENST00000410246 98 ntBASIC2.35□□□□□ -2.03
LRRTM3Q86VH5 AC009310.1-201ENST00000414414 451 ntBASIC2.35□□□□□ -2.03
LRRTM3Q86VH5 MLLT10P1-201ENST00000418346 262 ntBASIC2.35□□□□□ -2.03
LRRTM3Q86VH5 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LRRTM3Q86VH5 RNU7-34P-201ENST00000459394 64 ntBASIC2.35□□□□□ -2.03
LRRTM3Q86VH5 Y_RNA.797-201ENST00000515977 94 ntBASIC2.35□□□□□ -2.03
LRRTM3Q86VH5 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.35□□□□□ -2.03
LRRTM3Q86VH5 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.35□□□□□ -2.03
LRRTM3Q86VH5 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.34□□□□□ -2.03
LRRTM3Q86VH5 Y_RNA.182-201ENST00000363880 111 ntBASIC2.34□□□□□ -2.03
LRRTM3Q86VH5 Y_RNA.587-201ENST00000391210 103 ntBASIC2.34□□□□□ -2.03
LRRTM3Q86VH5 SNORD11-201ENST00000459124 84 ntBASIC2.34□□□□□ -2.03
LRRTM3Q86VH5 snoU13.15-201ENST00000459407 104 ntBASIC2.34□□□□□ -2.03
LRRTM3Q86VH5 SCARNA8-201ENST00000515924 131 ntBASIC2.34□□□□□ -2.03
LRRTM3Q86VH5 RNU6-453P-201ENST00000516819 85 ntBASIC2.34□□□□□ -2.03
LRRTM3Q86VH5 AC022559.1-201ENST00000520905 205 ntBASIC2.34□□□□□ -2.03
LRRTM3Q86VH5 AC087685.1-201ENST00000587507 141 ntBASIC2.34□□□□□ -2.03
LRRTM3Q86VH5 AL049861.1-201ENST00000603130 150 ntBASIC2.34□□□□□ -2.03
LRRTM3Q86VH5 AL773524.1-201ENST00000614065 229 ntBASIC2.34□□□□□ -2.03
LRRTM3Q86VH5 MIR6873-201ENST00000622788 63 ntBASIC2.34□□□□□ -2.03
LRRTM3Q86VH5 AL596028.1-201ENST00000326971 197 ntBASIC2.33□□□□□ -2.04
LRRTM3Q86VH5 Y_RNA.270-201ENST00000364693 104 ntBASIC2.33□□□□□ -2.04
LRRTM3Q86VH5 RNU6-1031P-201ENST00000384773 107 ntBASIC2.33□□□□□ -2.04
LRRTM3Q86VH5 RNU6-360P-201ENST00000390944 104 ntBASIC2.33□□□□□ -2.04
LRRTM3Q86VH5 AL606845.1-201ENST00000404881 255 ntBASIC2.33□□□□□ -2.04
LRRTM3Q86VH5 RPL23AP6-201ENST00000446637 472 ntBASIC2.33□□□□□ -2.04
LRRTM3Q86VH5 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.33□□□□□ -2.04
LRRTM3Q86VH5 uc_338.4-201ENST00000616635 176 ntBASIC2.33□□□□□ -2.04
LRRTM3Q86VH5 AC009831.4-201ENST00000620744 325 ntBASIC2.33□□□□□ -2.04
LRRTM3Q86VH5 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LRRTM3Q86VH5 Y_RNA.242-201ENST00000364473 110 ntBASIC2.32□□□□□ -2.04
LRRTM3Q86VH5 MIR17-201ENST00000385012 84 ntBASIC2.32□□□□□ -2.04
LRRTM3Q86VH5 MIR522-201ENST00000385071 87 ntBASIC2.32□□□□□ -2.04
LRRTM3Q86VH5 MT-TT-201ENST00000387460 66 ntBASIC2.32□□□□□ -2.04
LRRTM3Q86VH5 RNU6-578P-201ENST00000390980 103 ntBASIC2.32□□□□□ -2.04
LRRTM3Q86VH5 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.32□□□□□ -2.04
LRRTM3Q86VH5 AC244636.1-201ENST00000421152 228 ntBASIC2.32□□□□□ -2.04
LRRTM3Q86VH5 FTH1P12-201ENST00000432137 551 ntBASIC2.32□□□□□ -2.04
LRRTM3Q86VH5 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.32□□□□□ -2.04
LRRTM3Q86VH5 RPS27P21-201ENST00000486977 252 ntBASIC2.32□□□□□ -2.04
LRRTM3Q86VH5 AC079804.2-201ENST00000490376 200 ntBASIC2.32□□□□□ -2.04
LRRTM3Q86VH5 OR9P1P-201ENST00000496431 281 ntBASIC2.32□□□□□ -2.04
LRRTM3Q86VH5 MIR4762-201ENST00000585261 75 ntBASIC2.32□□□□□ -2.04
LRRTM3Q86VH5 FTX_2.1-201ENST00000618816 94 ntBASIC2.32□□□□□ -2.04
LRRTM3Q86VH5 U8.5-201ENST00000364528 136 ntBASIC2.31□□□□□ -2.04
LRRTM3Q86VH5 SNORA12.1-201ENST00000390873 148 ntBASIC2.31□□□□□ -2.04
LRRTM3Q86VH5 RPL30P13-201ENST00000418873 348 ntBASIC2.31□□□□□ -2.04
LRRTM3Q86VH5 Y_RNA.662-201ENST00000516028 97 ntBASIC2.31□□□□□ -2.04
LRRTM3Q86VH5 RNA5SP200-201ENST00000516360 103 ntBASIC2.31□□□□□ -2.04
LRRTM3Q86VH5 SCARNA16.3-201ENST00000516595 184 ntBASIC2.31□□□□□ -2.04
LRRTM3Q86VH5 RNU6-861P-201ENST00000516745 106 ntBASIC2.31□□□□□ -2.04
LRRTM3Q86VH5 MIR514B-201ENST00000516774 80 ntBASIC2.31□□□□□ -2.04
LRRTM3Q86VH5 AC108706.1-201ENST00000611053 297 ntBASIC2.31□□□□□ -2.04
LRRTM3Q86VH5 AL137847.3-201ENST00000611521 109 ntBASIC2.31□□□□□ -2.04
LRRTM3Q86VH5 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.31□□□□□ -2.04
LRRTM3Q86VH5 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.3□□□□□ -2.04
LRRTM3Q86VH5 RNU6-1084P-201ENST00000362498 107 ntBASIC2.3□□□□□ -2.04
LRRTM3Q86VH5 Y_RNA.75-201ENST00000362927 97 ntBASIC2.3□□□□□ -2.04
LRRTM3Q86VH5 RNU6-728P-201ENST00000365375 104 ntBASIC2.3□□□□□ -2.04
LRRTM3Q86VH5 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.3□□□□□ -2.04
LRRTM3Q86VH5 snoU13.26-201ENST00000459452 105 ntBASIC2.3□□□□□ -2.04
LRRTM3Q86VH5 RNU6-126P-201ENST00000516685 103 ntBASIC2.3□□□□□ -2.04
LRRTM3Q86VH5 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.3□□□□□ -2.04
LRRTM3Q86VH5 MRPS18CP4-201ENST00000535821 231 ntBASIC2.3□□□□□ -2.04
LRRTM3Q86VH5 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.3□□□□□ -2.04
LRRTM3Q86VH5 U6.106-201ENST00000636360 105 ntBASIC2.3□□□□□ -2.04
LRRTM3Q86VH5 AC080100.1-201ENST00000624239 5356 ntBASIC2.3□□□□□ -2.04
LRRTM3Q86VH5 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
LRRTM3Q86VH5 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
LRRTM3Q86VH5 RNU6-682P-201ENST00000363843 106 ntBASIC2.29□□□□□ -2.04
LRRTM3Q86VH5 RNU6-312P-201ENST00000364629 107 ntBASIC2.29□□□□□ -2.04
LRRTM3Q86VH5 RNU6-275P-201ENST00000364910 107 ntBASIC2.29□□□□□ -2.04
LRRTM3Q86VH5 RNU2-55P-201ENST00000411146 174 ntBASIC2.29□□□□□ -2.04
LRRTM3Q86VH5 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.29□□□□□ -2.04
LRRTM3Q86VH5 NDUFA4P2-201ENST00000489989 244 ntBASIC2.29□□□□□ -2.04
LRRTM3Q86VH5 RNU6-1219P-201ENST00000516143 112 ntBASIC2.29□□□□□ -2.04
LRRTM3Q86VH5 IGKV3-31-201ENST00000523109 329 ntBASIC2.29□□□□□ -2.04
LRRTM3Q86VH5 AC109810.1-201ENST00000534066 224 ntBASIC2.29□□□□□ -2.04
LRRTM3Q86VH5 MIR4662B-201ENST00000579498 81 ntBASIC2.29□□□□□ -2.04
LRRTM3Q86VH5 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.29□□□□□ -2.04
LRRTM3Q86VH5 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
LRRTM3Q86VH5 Y_RNA.240-201ENST00000364469 95 ntBASIC2.28□□□□□ -2.04
LRRTM3Q86VH5 snoU2-30.1-201ENST00000365012 70 ntBASIC2.28□□□□□ -2.04
LRRTM3Q86VH5 Y_RNA.412-201ENST00000384001 104 ntBASIC2.28□□□□□ -2.04
LRRTM3Q86VH5 Y_RNA.555-201ENST00000384673 110 ntBASIC2.28□□□□□ -2.04
LRRTM3Q86VH5 MIR802-201ENST00000390235 94 ntBASIC2.28□□□□□ -2.04
LRRTM3Q86VH5 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.28□□□□□ -2.04
LRRTM3Q86VH5 AL121914.1-201ENST00000450188 156 ntBASIC2.28□□□□□ -2.04
LRRTM3Q86VH5 SNORD77.4-201ENST00000516158 81 ntBASIC2.28□□□□□ -2.04
LRRTM3Q86VH5 MIR4299-201ENST00000577899 72 ntBASIC2.28□□□□□ -2.04
LRRTM3Q86VH5 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.28□□□□□ -2.04
LRRTM3Q86VH5 MIR219B-201ENST00000637023 88 ntBASIC2.28□□□□□ -2.04
LRRTM3Q86VH5 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
LRRTM3Q86VH5 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LRRTM3Q86VH5 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LRRTM3Q86VH5 MT-TR-201ENST00000387439 65 ntBASIC2.27□□□□□ -2.05
LRRTM3Q86VH5 SNORA79-201ENST00000408376 140 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 199.2 ms