Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AC245047.4-201ENST00000433189 144 ntBASIC2.1□□□□□ -2.07
KRT28Q7Z3Y7 AL162725.1-201ENST00000435405 301 ntBASIC2.1□□□□□ -2.07
KRT28Q7Z3Y7 RPS4XP11-201ENST00000446897 772 ntBASIC2.1□□□□□ -2.07
KRT28Q7Z3Y7 AC233266.1-201ENST00000454518 96 ntBASIC2.1□□□□□ -2.07
KRT28Q7Z3Y7 SNORD2.1-201ENST00000458762 69 ntBASIC2.1□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.650-201ENST00000459002 102 ntBASIC2.1□□□□□ -2.07
KRT28Q7Z3Y7 RNU6-1023P-201ENST00000516137 106 ntBASIC2.1□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.777-201ENST00000516982 102 ntBASIC2.1□□□□□ -2.07
KRT28Q7Z3Y7 MIR4282-201ENST00000583613 67 ntBASIC2.1□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.771-201ENST00000598668 102 ntBASIC2.1□□□□□ -2.07
KRT28Q7Z3Y7 AC004832.4-201ENST00000608952 331 ntBASIC2.1□□□□□ -2.07
KRT28Q7Z3Y7 AC242852.1-201ENST00000612151 96 ntBASIC2.1□□□□□ -2.07
KRT28Q7Z3Y7 MIR6515-201ENST00000619843 57 ntBASIC2.1□□□□□ -2.07
KRT28Q7Z3Y7 AC244015.1-201ENST00000622301 99 ntBASIC2.1□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.789-201ENST00000622480 102 ntBASIC2.1□□□□□ -2.07
KRT28Q7Z3Y7 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.1□□□□□ -2.07
KRT28Q7Z3Y7 AC008555.8-201ENST00000623602 2168 ntBASIC2.09□□□□□ -2.07
KRT28Q7Z3Y7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.477-201ENST00000384352 108 ntBASIC2.09□□□□□ -2.07
KRT28Q7Z3Y7 MIR520G-201ENST00000385064 90 ntBASIC2.09□□□□□ -2.07
KRT28Q7Z3Y7 RNA5SP212-201ENST00000391223 107 ntBASIC2.09□□□□□ -2.07
KRT28Q7Z3Y7 SUMO2P12-201ENST00000405924 140 ntBASIC2.09□□□□□ -2.07
KRT28Q7Z3Y7 AL603910.2-201ENST00000407268 136 ntBASIC2.09□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.621-201ENST00000411065 96 ntBASIC2.09□□□□□ -2.07
KRT28Q7Z3Y7 AL158823.1-201ENST00000418441 478 ntBASIC2.09□□□□□ -2.07
KRT28Q7Z3Y7 AC091021.1-201ENST00000468051 388 ntBASIC2.09□□□□□ -2.07
KRT28Q7Z3Y7 SNORA31.24-201ENST00000517232 57 ntBASIC2.09□□□□□ -2.07
KRT28Q7Z3Y7 AC010900.2-201ENST00000604508 210 ntBASIC2.09□□□□□ -2.07
KRT28Q7Z3Y7 AC134026.1-201ENST00000623249 2239 ntBASIC2.08□□□□□ -2.08
KRT28Q7Z3Y7 RNU6-1272P-201ENST00000362776 107 ntBASIC2.08□□□□□ -2.08
KRT28Q7Z3Y7 RNU6-112P-201ENST00000363599 104 ntBASIC2.08□□□□□ -2.08
KRT28Q7Z3Y7 SNORA72.4-201ENST00000384174 132 ntBASIC2.08□□□□□ -2.08
KRT28Q7Z3Y7 Y_RNA.539-201ENST00000384635 107 ntBASIC2.08□□□□□ -2.08
KRT28Q7Z3Y7 MIR562-201ENST00000384894 95 ntBASIC2.08□□□□□ -2.08
KRT28Q7Z3Y7 RNA5SP109-201ENST00000391010 116 ntBASIC2.08□□□□□ -2.08
KRT28Q7Z3Y7 MTCO2P33-201ENST00000402100 465 ntBASIC2.08□□□□□ -2.08
KRT28Q7Z3Y7 HMGN2P19-201ENST00000425149 265 ntBASIC2.08□□□□□ -2.08
KRT28Q7Z3Y7 BTF3P11-201ENST00000426582 477 ntBASIC2.08□□□□□ -2.08
KRT28Q7Z3Y7 Y_RNA.637-201ENST00000459424 114 ntBASIC2.08□□□□□ -2.08
KRT28Q7Z3Y7 AC117454.1-201ENST00000491120 168 ntBASIC2.08□□□□□ -2.08
KRT28Q7Z3Y7 RNU6-1096P-201ENST00000517089 102 ntBASIC2.08□□□□□ -2.08
KRT28Q7Z3Y7 MIR4643-201ENST00000577473 78 ntBASIC2.08□□□□□ -2.08
KRT28Q7Z3Y7 MIR3128-201ENST00000581957 66 ntBASIC2.08□□□□□ -2.08
KRT28Q7Z3Y7 MIR3935-201ENST00000583472 104 ntBASIC2.08□□□□□ -2.08
KRT28Q7Z3Y7 AC091178.2-201ENST00000584401 117 ntBASIC2.08□□□□□ -2.08
KRT28Q7Z3Y7 AC022709.1-201ENST00000615967 87 ntBASIC2.08□□□□□ -2.08
KRT28Q7Z3Y7 AL353770.2-201ENST00000620024 78 ntBASIC2.08□□□□□ -2.08
KRT28Q7Z3Y7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRT28Q7Z3Y7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
KRT28Q7Z3Y7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRT28Q7Z3Y7 Y_RNA.36-201ENST00000362602 112 ntBASIC2.07□□□□□ -2.08
KRT28Q7Z3Y7 SNORD27-201ENST00000363981 72 ntBASIC2.07□□□□□ -2.08
KRT28Q7Z3Y7 RNU6-1048P-201ENST00000364054 107 ntBASIC2.07□□□□□ -2.08
KRT28Q7Z3Y7 SNORA63D-201ENST00000364359 132 ntBASIC2.07□□□□□ -2.08
KRT28Q7Z3Y7 RNU6-740P-201ENST00000364734 105 ntBASIC2.07□□□□□ -2.08
KRT28Q7Z3Y7 Y_RNA.277-201ENST00000364754 102 ntBASIC2.07□□□□□ -2.08
KRT28Q7Z3Y7 RNU6-1289P-201ENST00000384431 106 ntBASIC2.07□□□□□ -2.08
KRT28Q7Z3Y7 SNORA26.5-201ENST00000391215 123 ntBASIC2.07□□□□□ -2.08
KRT28Q7Z3Y7 AC245047.3-201ENST00000429428 127 ntBASIC2.07□□□□□ -2.08
KRT28Q7Z3Y7 RPL23AP6-201ENST00000446637 472 ntBASIC2.07□□□□□ -2.08
KRT28Q7Z3Y7 Y_RNA.679-201ENST00000516416 91 ntBASIC2.07□□□□□ -2.08
KRT28Q7Z3Y7 RNU6-1291P-201ENST00000516591 104 ntBASIC2.07□□□□□ -2.08
KRT28Q7Z3Y7 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.07□□□□□ -2.08
KRT28Q7Z3Y7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.07□□□□□ -2.08
KRT28Q7Z3Y7 POLR3GP1-201ENST00000594073 261 ntBASIC2.07□□□□□ -2.08
KRT28Q7Z3Y7 AL162424.1-201ENST00000602325 221 ntBASIC2.07□□□□□ -2.08
KRT28Q7Z3Y7 PVT1_3.1-201ENST00000620853 95 ntBASIC2.07□□□□□ -2.08
KRT28Q7Z3Y7 Y_RNA.60-201ENST00000362831 98 ntBASIC2.06□□□□□ -2.08
KRT28Q7Z3Y7 Y_RNA.117-201ENST00000363294 101 ntBASIC2.06□□□□□ -2.08
KRT28Q7Z3Y7 Y_RNA.188-201ENST00000363952 111 ntBASIC2.06□□□□□ -2.08
KRT28Q7Z3Y7 RNU6-1323P-201ENST00000384025 107 ntBASIC2.06□□□□□ -2.08
KRT28Q7Z3Y7 RNU6-763P-201ENST00000390865 106 ntBASIC2.06□□□□□ -2.08
KRT28Q7Z3Y7 Y_RNA.590-201ENST00000410140 107 ntBASIC2.06□□□□□ -2.08
KRT28Q7Z3Y7 RNA5SP100-201ENST00000410903 110 ntBASIC2.06□□□□□ -2.08
KRT28Q7Z3Y7 RNA5SP59-201ENST00000410922 110 ntBASIC2.06□□□□□ -2.08
KRT28Q7Z3Y7 AC104332.1-201ENST00000440471 797 ntBASIC2.06□□□□□ -2.08
KRT28Q7Z3Y7 RPS27P1-201ENST00000450552 247 ntBASIC2.06□□□□□ -2.08
KRT28Q7Z3Y7 RNA5SP233-201ENST00000459153 113 ntBASIC2.06□□□□□ -2.08
KRT28Q7Z3Y7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.06□□□□□ -2.08
KRT28Q7Z3Y7 RNU7-116P-201ENST00000516940 62 ntBASIC2.06□□□□□ -2.08
KRT28Q7Z3Y7 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.06□□□□□ -2.08
KRT28Q7Z3Y7 AC006006.1-201ENST00000603082 144 ntBASIC2.06□□□□□ -2.08
KRT28Q7Z3Y7 AC011921.3-201ENST00000605540 361 ntBASIC2.06□□□□□ -2.08
KRT28Q7Z3Y7 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.06□□□□□ -2.08
KRT28Q7Z3Y7 AL773524.1-201ENST00000614065 229 ntBASIC2.06□□□□□ -2.08
KRT28Q7Z3Y7 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.06□□□□□ -2.08
KRT28Q7Z3Y7 AC091895.1-201ENST00000624494 256 ntBASIC2.06□□□□□ -2.08
KRT28Q7Z3Y7 snoU18.1-201ENST00000629629 71 ntBASIC2.06□□□□□ -2.08
KRT28Q7Z3Y7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRT28Q7Z3Y7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
KRT28Q7Z3Y7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
KRT28Q7Z3Y7 RNU6-899P-201ENST00000363947 107 ntBASIC2.05□□□□□ -2.08
KRT28Q7Z3Y7 SNORA20.1-201ENST00000364790 130 ntBASIC2.05□□□□□ -2.08
KRT28Q7Z3Y7 U8.7-201ENST00000364940 136 ntBASIC2.05□□□□□ -2.08
KRT28Q7Z3Y7 RNU2-14P-201ENST00000411053 191 ntBASIC2.05□□□□□ -2.08
KRT28Q7Z3Y7 POLR2J4-204ENST00000418424 324 ntBASIC2.05□□□□□ -2.08
KRT28Q7Z3Y7 U8.19-201ENST00000459095 133 ntBASIC2.05□□□□□ -2.08
KRT28Q7Z3Y7 RNU7-141P-201ENST00000459304 62 ntBASIC2.05□□□□□ -2.08
KRT28Q7Z3Y7 RNA5SP481-201ENST00000516814 122 ntBASIC2.05□□□□□ -2.08
KRT28Q7Z3Y7 RNU2-56P-201ENST00000516826 190 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms