Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 RNU7-28P-201ENST00000516759 62 ntBASIC1.66□□□□□ -2.14
SHFQ7M4L6 MIR4419B-201ENST00000577260 68 ntBASIC1.66□□□□□ -2.14
SHFQ7M4L6 MIR4724-201ENST00000579485 89 ntBASIC1.66□□□□□ -2.14
SHFQ7M4L6 MIR4435-1-201ENST00000582552 80 ntBASIC1.66□□□□□ -2.14
SHFQ7M4L6 AC021506.2-201ENST00000612354 169 ntBASIC1.66□□□□□ -2.14
SHFQ7M4L6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SHFQ7M4L6 MIR367-201ENST00000362299 68 ntBASIC1.65□□□□□ -2.15
SHFQ7M4L6 Y_RNA.24-201ENST00000362508 103 ntBASIC1.65□□□□□ -2.15
SHFQ7M4L6 Y_RNA.200-201ENST00000364018 102 ntBASIC1.65□□□□□ -2.15
SHFQ7M4L6 Y_RNA.262-201ENST00000364641 102 ntBASIC1.65□□□□□ -2.15
SHFQ7M4L6 RNU6-969P-201ENST00000383900 105 ntBASIC1.65□□□□□ -2.15
SHFQ7M4L6 SNORA8.3-201ENST00000384679 139 ntBASIC1.65□□□□□ -2.15
SHFQ7M4L6 RNA5SP482-201ENST00000391269 118 ntBASIC1.65□□□□□ -2.15
SHFQ7M4L6 AC019129.1-201ENST00000403786 261 ntBASIC1.65□□□□□ -2.15
SHFQ7M4L6 RNA5SP508-201ENST00000411327 119 ntBASIC1.65□□□□□ -2.15
SHFQ7M4L6 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.65□□□□□ -2.15
SHFQ7M4L6 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.65□□□□□ -2.15
SHFQ7M4L6 AC003989.2-201ENST00000440224 169 ntBASIC1.65□□□□□ -2.15
SHFQ7M4L6 SNORA28-201ENST00000606769 126 ntBASIC1.65□□□□□ -2.15
SHFQ7M4L6 AC090425.1-201ENST00000610007 140 ntBASIC1.65□□□□□ -2.15
SHFQ7M4L6 AL627230.6-201ENST00000611129 280 ntBASIC1.65□□□□□ -2.15
SHFQ7M4L6 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.64□□□□□ -2.15
SHFQ7M4L6 MIR126-201ENST00000362291 85 ntBASIC1.64□□□□□ -2.15
SHFQ7M4L6 Y_RNA.199-201ENST00000364014 102 ntBASIC1.64□□□□□ -2.15
SHFQ7M4L6 Y_RNA.274-201ENST00000364714 101 ntBASIC1.64□□□□□ -2.15
SHFQ7M4L6 Y_RNA.308-201ENST00000365043 101 ntBASIC1.64□□□□□ -2.15
SHFQ7M4L6 RNU6-1318P-201ENST00000365389 103 ntBASIC1.64□□□□□ -2.15
SHFQ7M4L6 Y_RNA.515-201ENST00000384535 112 ntBASIC1.64□□□□□ -2.15
SHFQ7M4L6 MIR634-201ENST00000385208 97 ntBASIC1.64□□□□□ -2.15
SHFQ7M4L6 AL034345.1-201ENST00000407768 123 ntBASIC1.64□□□□□ -2.15
SHFQ7M4L6 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.64□□□□□ -2.15
SHFQ7M4L6 RN7SKP192-201ENST00000411291 327 ntBASIC1.64□□□□□ -2.15
SHFQ7M4L6 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.64□□□□□ -2.15
SHFQ7M4L6 SNRPGP10-201ENST00000432323 225 ntBASIC1.64□□□□□ -2.15
SHFQ7M4L6 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.64□□□□□ -2.15
SHFQ7M4L6 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.64□□□□□ -2.15
SHFQ7M4L6 SNORD11-201ENST00000459124 84 ntBASIC1.64□□□□□ -2.15
SHFQ7M4L6 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.64□□□□□ -2.15
SHFQ7M4L6 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
SHFQ7M4L6 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.64□□□□□ -2.15
SHFQ7M4L6 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.64□□□□□ -2.15
SHFQ7M4L6 RPL23AP91-201ENST00000569211 455 ntBASIC1.64□□□□□ -2.15
SHFQ7M4L6 MIR5688-201ENST00000580619 83 ntBASIC1.64□□□□□ -2.15
SHFQ7M4L6 AC103810.8-201ENST00000607347 118 ntBASIC1.64□□□□□ -2.15
SHFQ7M4L6 AL021707.8-201ENST00000609428 183 ntBASIC1.64□□□□□ -2.15
SHFQ7M4L6 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SHFQ7M4L6 MIRLET7C-201ENST00000362160 84 ntBASIC1.63□□□□□ -2.15
SHFQ7M4L6 MIR411-201ENST00000362239 96 ntBASIC1.63□□□□□ -2.15
SHFQ7M4L6 RNU6-661P-201ENST00000362409 107 ntBASIC1.63□□□□□ -2.15
SHFQ7M4L6 Y_RNA.83-201ENST00000363005 113 ntBASIC1.63□□□□□ -2.15
SHFQ7M4L6 SNORD68-201ENST00000363214 84 ntBASIC1.63□□□□□ -2.15
SHFQ7M4L6 snoU2_19.4-201ENST00000364329 80 ntBASIC1.63□□□□□ -2.15
SHFQ7M4L6 U8.5-201ENST00000364528 136 ntBASIC1.63□□□□□ -2.15
SHFQ7M4L6 RNA5SP363-201ENST00000365072 115 ntBASIC1.63□□□□□ -2.15
SHFQ7M4L6 RNU6-203P-201ENST00000384038 104 ntBASIC1.63□□□□□ -2.15
SHFQ7M4L6 RNU6-424P-201ENST00000384367 105 ntBASIC1.63□□□□□ -2.15
SHFQ7M4L6 MIR522-201ENST00000385071 87 ntBASIC1.63□□□□□ -2.15
SHFQ7M4L6 SNORA3.2-201ENST00000408221 125 ntBASIC1.63□□□□□ -2.15
SHFQ7M4L6 RNU6-847P-201ENST00000411115 108 ntBASIC1.63□□□□□ -2.15
SHFQ7M4L6 RN7SKP101-201ENST00000411376 320 ntBASIC1.63□□□□□ -2.15
SHFQ7M4L6 CALM2P4-201ENST00000430810 426 ntBASIC1.63□□□□□ -2.15
SHFQ7M4L6 AC024614.2-201ENST00000577584 372 ntBASIC1.63□□□□□ -2.15
SHFQ7M4L6 MIR2681-201ENST00000581814 105 ntBASIC1.63□□□□□ -2.15
SHFQ7M4L6 MIR4762-201ENST00000585261 75 ntBASIC1.63□□□□□ -2.15
SHFQ7M4L6 AC095038.3-201ENST00000634439 195 ntBASIC1.63□□□□□ -2.15
SHFQ7M4L6 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SHFQ7M4L6 MIR449A-201ENST00000362113 91 ntBASIC1.62□□□□□ -2.15
SHFQ7M4L6 Y_RNA.229-201ENST00000364347 113 ntBASIC1.62□□□□□ -2.15
SHFQ7M4L6 SNORD48-201ENST00000364953 64 ntBASIC1.62□□□□□ -2.15
SHFQ7M4L6 RNU4-17P-201ENST00000365598 141 ntBASIC1.62□□□□□ -2.15
SHFQ7M4L6 MIR194-1-201ENST00000384892 85 ntBASIC1.62□□□□□ -2.15
SHFQ7M4L6 MIR676-201ENST00000390702 67 ntBASIC1.62□□□□□ -2.15
SHFQ7M4L6 U8.16-201ENST00000391279 133 ntBASIC1.62□□□□□ -2.15
SHFQ7M4L6 RNU6-493P-201ENST00000391321 108 ntBASIC1.62□□□□□ -2.15
SHFQ7M4L6 MLLT10P1-201ENST00000418346 262 ntBASIC1.62□□□□□ -2.15
SHFQ7M4L6 NDUFA4P2-201ENST00000489989 244 ntBASIC1.62□□□□□ -2.15
SHFQ7M4L6 DEFB122-202ENST00000569013 197 ntBASIC1.62□□□□□ -2.15
SHFQ7M4L6 MIR3618-201ENST00000580330 88 ntBASIC1.62□□□□□ -2.15
SHFQ7M4L6 MIR4308-201ENST00000580634 81 ntBASIC1.62□□□□□ -2.15
SHFQ7M4L6 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.62□□□□□ -2.15
SHFQ7M4L6 JPX_2.1-201ENST00000614161 69 ntBASIC1.62□□□□□ -2.15
SHFQ7M4L6 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
SHFQ7M4L6 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SHFQ7M4L6 RNU6-200P-201ENST00000364743 107 ntBASIC1.61□□□□□ -2.15
SHFQ7M4L6 RNU6-923P-201ENST00000364753 107 ntBASIC1.61□□□□□ -2.15
SHFQ7M4L6 RNU6-381P-201ENST00000391259 108 ntBASIC1.61□□□□□ -2.15
SHFQ7M4L6 AL161935.2-201ENST00000414627 60 ntBASIC1.61□□□□□ -2.15
SHFQ7M4L6 FTH1P12-201ENST00000432137 551 ntBASIC1.61□□□□□ -2.15
SHFQ7M4L6 RPL23AP42-201ENST00000471152 471 ntBASIC1.61□□□□□ -2.15
SHFQ7M4L6 RPS29P11-201ENST00000496507 171 ntBASIC1.61□□□□□ -2.15
SHFQ7M4L6 MRPS17P9-201ENST00000511924 393 ntBASIC1.61□□□□□ -2.15
SHFQ7M4L6 SCARNA8-201ENST00000515924 131 ntBASIC1.61□□□□□ -2.15
SHFQ7M4L6 RNU6-138P-201ENST00000515952 107 ntBASIC1.61□□□□□ -2.15
SHFQ7M4L6 RNA5SP168-201ENST00000516642 112 ntBASIC1.61□□□□□ -2.15
SHFQ7M4L6 RNU6-1116P-201ENST00000517269 99 ntBASIC1.61□□□□□ -2.15
SHFQ7M4L6 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SHFQ7M4L6 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SHFQ7M4L6 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SHFQ7M4L6 Y_RNA.111-201ENST00000363248 100 ntBASIC1.6□□□□□ -2.15
SHFQ7M4L6 RNU6-414P-201ENST00000363705 104 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 232.3 ms