Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 RNA5SP445-201ENST00000515889 115 ntBASIC1.21□□□□□ -2.22
RFWD3Q6PCD5 RN7SKP179-201ENST00000516126 217 ntBASIC1.21□□□□□ -2.22
RFWD3Q6PCD5 RNA5SP168-201ENST00000516642 112 ntBASIC1.21□□□□□ -2.22
RFWD3Q6PCD5 MIR8070-201ENST00000616510 88 ntBASIC1.21□□□□□ -2.22
RFWD3Q6PCD5 SNORD3E-202ENST00000627253 216 ntBASIC1.21□□□□□ -2.22
RFWD3Q6PCD5 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.21□□□□□ -2.22
RFWD3Q6PCD5 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
RFWD3Q6PCD5 RNU4-80P-201ENST00000363200 141 ntBASIC1.2□□□□□ -2.22
RFWD3Q6PCD5 Y_RNA.136-201ENST00000363444 102 ntBASIC1.2□□□□□ -2.22
RFWD3Q6PCD5 RNU4-41P-201ENST00000364426 143 ntBASIC1.2□□□□□ -2.22
RFWD3Q6PCD5 RNA5SP259-201ENST00000365541 109 ntBASIC1.2□□□□□ -2.22
RFWD3Q6PCD5 RNU6-1080P-201ENST00000383982 107 ntBASIC1.2□□□□□ -2.22
RFWD3Q6PCD5 SNORA72-201ENST00000384339 132 ntBASIC1.2□□□□□ -2.22
RFWD3Q6PCD5 Y_RNA.621-201ENST00000411065 96 ntBASIC1.2□□□□□ -2.22
RFWD3Q6PCD5 RPS27P16-201ENST00000425758 201 ntBASIC1.2□□□□□ -2.22
RFWD3Q6PCD5 CALM2P4-201ENST00000430810 426 ntBASIC1.2□□□□□ -2.22
RFWD3Q6PCD5 AC027119.1-201ENST00000440877 241 ntBASIC1.2□□□□□ -2.22
RFWD3Q6PCD5 Z98949.2-201ENST00000440996 144 ntBASIC1.2□□□□□ -2.22
RFWD3Q6PCD5 U8.19-201ENST00000459095 133 ntBASIC1.2□□□□□ -2.22
RFWD3Q6PCD5 MRPS35P2-201ENST00000508242 191 ntBASIC1.2□□□□□ -2.22
RFWD3Q6PCD5 RNU7-116P-201ENST00000516940 62 ntBASIC1.2□□□□□ -2.22
RFWD3Q6PCD5 RNU6-902P-201ENST00000517212 91 ntBASIC1.2□□□□□ -2.22
RFWD3Q6PCD5 AC019176.1-201ENST00000518519 225 ntBASIC1.2□□□□□ -2.22
RFWD3Q6PCD5 SUMO2P16-201ENST00000519475 264 ntBASIC1.2□□□□□ -2.22
RFWD3Q6PCD5 AC006504.6-201ENST00000590142 199 ntBASIC1.2□□□□□ -2.22
RFWD3Q6PCD5 Y_RNA.812-201ENST00000610788 101 ntBASIC1.2□□□□□ -2.22
RFWD3Q6PCD5 Y_RNA.784-201ENST00000613803 101 ntBASIC1.2□□□□□ -2.22
RFWD3Q6PCD5 Y_RNA.787-201ENST00000616522 101 ntBASIC1.2□□□□□ -2.22
RFWD3Q6PCD5 Y_RNA.780-201ENST00000617336 101 ntBASIC1.2□□□□□ -2.22
RFWD3Q6PCD5 Y_RNA.801-201ENST00000619005 101 ntBASIC1.2□□□□□ -2.22
RFWD3Q6PCD5 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.2□□□□□ -2.22
RFWD3Q6PCD5 AC068647.2-201ENST00000637380 353 ntBASIC1.2□□□□□ -2.22
RFWD3Q6PCD5 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
RFWD3Q6PCD5 RNU6-290P-201ENST00000365212 101 ntBASIC1.19□□□□□ -2.22
RFWD3Q6PCD5 Y_RNA.418-201ENST00000384029 102 ntBASIC1.19□□□□□ -2.22
RFWD3Q6PCD5 Y_RNA.569-201ENST00000384749 103 ntBASIC1.19□□□□□ -2.22
RFWD3Q6PCD5 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
RFWD3Q6PCD5 COX6CP14-201ENST00000469580 174 ntBASIC1.19□□□□□ -2.22
RFWD3Q6PCD5 AC098869.1-201ENST00000481627 292 ntBASIC1.19□□□□□ -2.22
RFWD3Q6PCD5 Y_RNA.673-201ENST00000516306 88 ntBASIC1.19□□□□□ -2.22
RFWD3Q6PCD5 AC136628.3-201ENST00000521868 290 ntBASIC1.19□□□□□ -2.22
RFWD3Q6PCD5 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.19□□□□□ -2.22
RFWD3Q6PCD5 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.19□□□□□ -2.22
RFWD3Q6PCD5 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.19□□□□□ -2.22
RFWD3Q6PCD5 AL121890.5-201ENST00000620848 304 ntBASIC1.19□□□□□ -2.22
RFWD3Q6PCD5 MIRLET7C-201ENST00000362160 84 ntBASIC1.18□□□□□ -2.22
RFWD3Q6PCD5 snoU2_19.2-201ENST00000363024 80 ntBASIC1.18□□□□□ -2.22
RFWD3Q6PCD5 RNU6-806P-201ENST00000365147 105 ntBASIC1.18□□□□□ -2.22
RFWD3Q6PCD5 RNU6-1160P-201ENST00000384546 104 ntBASIC1.18□□□□□ -2.22
RFWD3Q6PCD5 RNU6-1105P-201ENST00000384774 107 ntBASIC1.18□□□□□ -2.22
RFWD3Q6PCD5 U8.16-201ENST00000391279 133 ntBASIC1.18□□□□□ -2.22
RFWD3Q6PCD5 AC113618.1-201ENST00000416747 285 ntBASIC1.18□□□□□ -2.22
RFWD3Q6PCD5 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.18□□□□□ -2.22
RFWD3Q6PCD5 AL731563.1-201ENST00000442202 214 ntBASIC1.18□□□□□ -2.22
RFWD3Q6PCD5 MTND4LP30-201ENST00000454092 297 ntBASIC1.18□□□□□ -2.22
RFWD3Q6PCD5 RNU6-191P-201ENST00000516295 94 ntBASIC1.18□□□□□ -2.22
RFWD3Q6PCD5 AP003733.2-201ENST00000529409 171 ntBASIC1.18□□□□□ -2.22
RFWD3Q6PCD5 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.18□□□□□ -2.22
RFWD3Q6PCD5 POLR3GP1-201ENST00000594073 261 ntBASIC1.18□□□□□ -2.22
RFWD3Q6PCD5 AP003357.1-201ENST00000604497 148 ntBASIC1.18□□□□□ -2.22
RFWD3Q6PCD5 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
RFWD3Q6PCD5 Y_RNA.26-201ENST00000362539 101 ntBASIC1.17□□□□□ -2.22
RFWD3Q6PCD5 Y_RNA.64-201ENST00000362845 102 ntBASIC1.17□□□□□ -2.22
RFWD3Q6PCD5 Y_RNA.226-201ENST00000364337 114 ntBASIC1.17□□□□□ -2.22
RFWD3Q6PCD5 U8.5-201ENST00000364528 136 ntBASIC1.17□□□□□ -2.22
RFWD3Q6PCD5 RNU6-1065P-201ENST00000384513 106 ntBASIC1.17□□□□□ -2.22
RFWD3Q6PCD5 Y_RNA.541-201ENST00000384640 113 ntBASIC1.17□□□□□ -2.22
RFWD3Q6PCD5 MIR215-201ENST00000384858 110 ntBASIC1.17□□□□□ -2.22
RFWD3Q6PCD5 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.17□□□□□ -2.22
RFWD3Q6PCD5 RPL21P38-201ENST00000418090 167 ntBASIC1.17□□□□□ -2.22
RFWD3Q6PCD5 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.17□□□□□ -2.22
RFWD3Q6PCD5 SNX2P2-201ENST00000424553 323 ntBASIC1.17□□□□□ -2.22
RFWD3Q6PCD5 AC104332.1-201ENST00000440471 797 ntBASIC1.17□□□□□ -2.22
RFWD3Q6PCD5 RNU7-115P-201ENST00000516433 55 ntBASIC1.17□□□□□ -2.22
RFWD3Q6PCD5 RNU2-31P-201ENST00000516954 155 ntBASIC1.17□□□□□ -2.22
RFWD3Q6PCD5 MIR3937-201ENST00000580135 106 ntBASIC1.17□□□□□ -2.22
RFWD3Q6PCD5 AL365434.2-201ENST00000607979 234 ntBASIC1.17□□□□□ -2.22
RFWD3Q6PCD5 AL591926.4-201ENST00000616895 298 ntBASIC1.17□□□□□ -2.22
RFWD3Q6PCD5 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
RFWD3Q6PCD5 SNORD68-201ENST00000363214 84 ntBASIC1.16□□□□□ -2.22
RFWD3Q6PCD5 RNU6-801P-201ENST00000364087 105 ntBASIC1.16□□□□□ -2.22
RFWD3Q6PCD5 U8.7-201ENST00000364940 136 ntBASIC1.16□□□□□ -2.22
RFWD3Q6PCD5 SNORA72.4-201ENST00000384174 132 ntBASIC1.16□□□□□ -2.22
RFWD3Q6PCD5 MIR606-201ENST00000384851 96 ntBASIC1.16□□□□□ -2.22
RFWD3Q6PCD5 SNORA53-201ENST00000391141 249 ntBASIC1.16□□□□□ -2.22
RFWD3Q6PCD5 MTCO1P5-201ENST00000433573 344 ntBASIC1.16□□□□□ -2.22
RFWD3Q6PCD5 RPL39P38-201ENST00000467018 153 ntBASIC1.16□□□□□ -2.22
RFWD3Q6PCD5 AC117454.1-201ENST00000491120 168 ntBASIC1.16□□□□□ -2.22
RFWD3Q6PCD5 RNU7-12P-201ENST00000516030 62 ntBASIC1.16□□□□□ -2.22
RFWD3Q6PCD5 RNA5SP102-201ENST00000516865 106 ntBASIC1.16□□□□□ -2.22
RFWD3Q6PCD5 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.16□□□□□ -2.22
RFWD3Q6PCD5 AC024405.2-202ENST00000532731 184 ntBASIC1.16□□□□□ -2.22
RFWD3Q6PCD5 AC127455.1-201ENST00000565496 145 ntBASIC1.16□□□□□ -2.22
RFWD3Q6PCD5 MIR4762-201ENST00000585261 75 ntBASIC1.16□□□□□ -2.22
RFWD3Q6PCD5 AC037487.3-201ENST00000606668 112 ntBASIC1.16□□□□□ -2.22
RFWD3Q6PCD5 MIR548AY-201ENST00000617669 107 ntBASIC1.16□□□□□ -2.22
RFWD3Q6PCD5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.15□□□□□ -2.22
RFWD3Q6PCD5 RNU6-199P-201ENST00000362954 107 ntBASIC1.15□□□□□ -2.23
RFWD3Q6PCD5 SNORD114-27-201ENST00000363766 70 ntBASIC1.15□□□□□ -2.23
RFWD3Q6PCD5 Y_RNA.253-201ENST00000364562 112 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms