Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 RNU6-1040P-201ENST00000383974 107 ntBASIC0.79□□□□□ -2.28
ATL3Q6DD88 MIR452-201ENST00000385020 85 ntBASIC0.79□□□□□ -2.28
ATL3Q6DD88 RNY4P36-201ENST00000391116 96 ntBASIC0.79□□□□□ -2.28
ATL3Q6DD88 MIR548J-201ENST00000408833 112 ntBASIC0.79□□□□□ -2.28
ATL3Q6DD88 MCFD2P1-201ENST00000417812 300 ntBASIC0.79□□□□□ -2.28
ATL3Q6DD88 MTND5P15-201ENST00000434246 349 ntBASIC0.79□□□□□ -2.28
ATL3Q6DD88 FGF7P4-201ENST00000509595 295 ntBASIC0.79□□□□□ -2.28
ATL3Q6DD88 PSMC1P5-201ENST00000512850 177 ntBASIC0.79□□□□□ -2.28
ATL3Q6DD88 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.79□□□□□ -2.28
ATL3Q6DD88 MIR6779-201ENST00000617283 64 ntBASIC0.79□□□□□ -2.28
ATL3Q6DD88 MIR6767-201ENST00000637302 66 ntBASIC0.79□□□□□ -2.28
ATL3Q6DD88 MIR96-201ENST00000362288 78 ntBASIC0.78□□□□□ -2.28
ATL3Q6DD88 SNORD81.1-201ENST00000363064 77 ntBASIC0.78□□□□□ -2.28
ATL3Q6DD88 SNORD50B-201ENST00000364995 70 ntBASIC0.78□□□□□ -2.28
ATL3Q6DD88 Y_RNA.310-201ENST00000365063 113 ntBASIC0.78□□□□□ -2.28
ATL3Q6DD88 SNORA72-201ENST00000384339 132 ntBASIC0.78□□□□□ -2.28
ATL3Q6DD88 Y_RNA.496-201ENST00000384444 101 ntBASIC0.78□□□□□ -2.28
ATL3Q6DD88 Y_RNA.570-201ENST00000384750 101 ntBASIC0.78□□□□□ -2.28
ATL3Q6DD88 MIR216A-201ENST00000385063 110 ntBASIC0.78□□□□□ -2.28
ATL3Q6DD88 Y_RNA.621-201ENST00000411065 96 ntBASIC0.78□□□□□ -2.28
ATL3Q6DD88 AL606490.4-201ENST00000423117 127 ntBASIC0.78□□□□□ -2.28
ATL3Q6DD88 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.78□□□□□ -2.28
ATL3Q6DD88 SNORA74.3-201ENST00000517108 154 ntBASIC0.78□□□□□ -2.28
ATL3Q6DD88 AC090142.3-201ENST00000519012 385 ntBASIC0.78□□□□□ -2.28
ATL3Q6DD88 UBE2V2P2-201ENST00000587677 504 ntBASIC0.78□□□□□ -2.28
ATL3Q6DD88 VN1R91P-201ENST00000594377 169 ntBASIC0.78□□□□□ -2.28
ATL3Q6DD88 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.78□□□□□ -2.28
ATL3Q6DD88 MIR4272-201ENST00000635924 64 ntBASIC0.78□□□□□ -2.28
ATL3Q6DD88 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
ATL3Q6DD88 RNA5SP264-201ENST00000363115 107 ntBASIC0.77□□□□□ -2.29
ATL3Q6DD88 Y_RNA.187-201ENST00000363918 113 ntBASIC0.77□□□□□ -2.29
ATL3Q6DD88 RNU6-324P-201ENST00000363957 106 ntBASIC0.77□□□□□ -2.29
ATL3Q6DD88 RNU6-1323P-201ENST00000384025 107 ntBASIC0.77□□□□□ -2.29
ATL3Q6DD88 RNY1P4-201ENST00000384595 115 ntBASIC0.77□□□□□ -2.29
ATL3Q6DD88 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.77□□□□□ -2.29
ATL3Q6DD88 RNU7-90P-201ENST00000459216 62 ntBASIC0.77□□□□□ -2.29
ATL3Q6DD88 AC091951.2-201ENST00000500762 203 ntBASIC0.77□□□□□ -2.29
ATL3Q6DD88 SNORD45.4-201ENST00000516629 73 ntBASIC0.77□□□□□ -2.29
ATL3Q6DD88 RN7SKP295-201ENST00000517264 153 ntBASIC0.77□□□□□ -2.29
ATL3Q6DD88 AC106800.4-201ENST00000614905 153 ntBASIC0.77□□□□□ -2.29
ATL3Q6DD88 AC133104.2-201ENST00000615272 193 ntBASIC0.77□□□□□ -2.29
ATL3Q6DD88 RNU6-1175P-201ENST00000365200 107 ntBASIC0.76□□□□□ -2.29
ATL3Q6DD88 MIR608-201ENST00000384820 100 ntBASIC0.76□□□□□ -2.29
ATL3Q6DD88 MIR1185-1-201ENST00000408598 86 ntBASIC0.76□□□□□ -2.29
ATL3Q6DD88 SNRPGP10-201ENST00000432323 225 ntBASIC0.76□□□□□ -2.29
ATL3Q6DD88 U8.19-201ENST00000459095 133 ntBASIC0.76□□□□□ -2.29
ATL3Q6DD88 SNORD111.1-201ENST00000516421 86 ntBASIC0.76□□□□□ -2.29
ATL3Q6DD88 AC136628.3-201ENST00000521868 290 ntBASIC0.76□□□□□ -2.29
ATL3Q6DD88 AC084781.2-201ENST00000615568 161 ntBASIC0.76□□□□□ -2.29
ATL3Q6DD88 Y_RNA.259-201ENST00000364619 101 ntBASIC0.75□□□□□ -2.29
ATL3Q6DD88 Y_RNA.368-201ENST00000365547 113 ntBASIC0.75□□□□□ -2.29
ATL3Q6DD88 Y_RNA.458-201ENST00000384240 102 ntBASIC0.75□□□□□ -2.29
ATL3Q6DD88 Y_RNA.462-201ENST00000384268 102 ntBASIC0.75□□□□□ -2.29
ATL3Q6DD88 MIR516B2-201ENST00000385190 85 ntBASIC0.75□□□□□ -2.29
ATL3Q6DD88 MIR136-201ENST00000385207 82 ntBASIC0.75□□□□□ -2.29
ATL3Q6DD88 MIR100-201ENST00000385259 80 ntBASIC0.75□□□□□ -2.29
ATL3Q6DD88 FABP5P4-201ENST00000437203 171 ntBASIC0.75□□□□□ -2.29
ATL3Q6DD88 RNU7-41P-201ENST00000515917 61 ntBASIC0.75□□□□□ -2.29
ATL3Q6DD88 MIR5000-201ENST00000577717 103 ntBASIC0.75□□□□□ -2.29
ATL3Q6DD88 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
ATL3Q6DD88 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
ATL3Q6DD88 RNU6-1115P-201ENST00000362490 106 ntBASIC0.74□□□□□ -2.29
ATL3Q6DD88 SNORA72.1-201ENST00000363485 129 ntBASIC0.74□□□□□ -2.29
ATL3Q6DD88 RNA5SP325-201ENST00000363756 130 ntBASIC0.74□□□□□ -2.29
ATL3Q6DD88 Y_RNA.205-201ENST00000364128 113 ntBASIC0.74□□□□□ -2.29
ATL3Q6DD88 Y_RNA.303-201ENST00000364998 94 ntBASIC0.74□□□□□ -2.29
ATL3Q6DD88 Y_RNA.428-201ENST00000384078 102 ntBASIC0.74□□□□□ -2.29
ATL3Q6DD88 MIR942-201ENST00000401111 86 ntBASIC0.74□□□□□ -2.29
ATL3Q6DD88 RNU6-710P-201ENST00000410424 105 ntBASIC0.74□□□□□ -2.29
ATL3Q6DD88 AC006461.1-201ENST00000412637 326 ntBASIC0.74□□□□□ -2.29
ATL3Q6DD88 MLLT10P1-201ENST00000418346 262 ntBASIC0.74□□□□□ -2.29
ATL3Q6DD88 AF228730.4-201ENST00000421457 183 ntBASIC0.74□□□□□ -2.29
ATL3Q6DD88 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.74□□□□□ -2.29
ATL3Q6DD88 AC005042.3-201ENST00000453230 174 ntBASIC0.74□□□□□ -2.29
ATL3Q6DD88 Y_RNA.632-201ENST00000459189 102 ntBASIC0.74□□□□□ -2.29
ATL3Q6DD88 RNA5SP255-201ENST00000516370 107 ntBASIC0.74□□□□□ -2.29
ATL3Q6DD88 RNU6-197P-201ENST00000516680 100 ntBASIC0.74□□□□□ -2.29
ATL3Q6DD88 SNORD116.3-201ENST00000517176 78 ntBASIC0.74□□□□□ -2.29
ATL3Q6DD88 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.74□□□□□ -2.29
ATL3Q6DD88 AC006600.1-201ENST00000572529 153 ntBASIC0.74□□□□□ -2.29
ATL3Q6DD88 AC104985.2-201ENST00000620598 500 ntBASIC0.74□□□□□ -2.29
ATL3Q6DD88 MIR6835-201ENST00000621552 64 ntBASIC0.74□□□□□ -2.29
ATL3Q6DD88 Y_RNA.5-201ENST00000362334 102 ntBASIC0.73□□□□□ -2.29
ATL3Q6DD88 RNU6-1084P-201ENST00000362498 107 ntBASIC0.73□□□□□ -2.29
ATL3Q6DD88 Y_RNA.384-201ENST00000383909 102 ntBASIC0.73□□□□□ -2.29
ATL3Q6DD88 Y_RNA.393-201ENST00000383936 102 ntBASIC0.73□□□□□ -2.29
ATL3Q6DD88 Y_RNA.456-201ENST00000384232 111 ntBASIC0.73□□□□□ -2.29
ATL3Q6DD88 MIR520C-201ENST00000385005 87 ntBASIC0.73□□□□□ -2.29
ATL3Q6DD88 MIR628-201ENST00000385229 95 ntBASIC0.73□□□□□ -2.29
ATL3Q6DD88 RPS3AP1-201ENST00000413190 320 ntBASIC0.73□□□□□ -2.29
ATL3Q6DD88 MTCO2P27-201ENST00000420740 428 ntBASIC0.73□□□□□ -2.29
ATL3Q6DD88 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.73□□□□□ -2.29
ATL3Q6DD88 AC117454.1-201ENST00000491120 168 ntBASIC0.73□□□□□ -2.29
ATL3Q6DD88 AC082651.2-201ENST00000496833 166 ntBASIC0.73□□□□□ -2.29
ATL3Q6DD88 RN7SKP164-201ENST00000516138 266 ntBASIC0.73□□□□□ -2.29
ATL3Q6DD88 RNU4-77P-201ENST00000516692 156 ntBASIC0.73□□□□□ -2.29
ATL3Q6DD88 AC004817.2-201ENST00000561794 651 ntBASIC0.73□□□□□ -2.29
ATL3Q6DD88 AL355375.2-201ENST00000574825 175 ntBASIC0.73□□□□□ -2.29
ATL3Q6DD88 MIR4764-201ENST00000580680 88 ntBASIC0.73□□□□□ -2.29
ATL3Q6DD88 RN7SL793P-201ENST00000583259 296 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms