Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 AC024405.2-202ENST00000532731 184 ntBASIC1.21□□□□□ -2.22
KRT39Q6A163 AC020661.2-201ENST00000560114 134 ntBASIC1.21□□□□□ -2.22
KRT39Q6A163 FAM106DP-201ENST00000586416 501 ntBASIC1.21□□□□□ -2.22
KRT39Q6A163 AC124312.5-201ENST00000604451 268 ntBASIC1.21□□□□□ -2.22
KRT39Q6A163 AP003357.1-201ENST00000604497 148 ntBASIC1.21□□□□□ -2.22
KRT39Q6A163 SNORD113-5-201ENST00000607261 78 ntBASIC1.21□□□□□ -2.22
KRT39Q6A163 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.21□□□□□ -2.22
KRT39Q6A163 AC027335.2-201ENST00000624030 375 ntBASIC1.21□□□□□ -2.22
KRT39Q6A163 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRT39Q6A163 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRT39Q6A163 RNU4-80P-201ENST00000363200 141 ntBASIC1.2□□□□□ -2.22
KRT39Q6A163 Y_RNA.222-201ENST00000364264 102 ntBASIC1.2□□□□□ -2.22
KRT39Q6A163 SNORA63.7-201ENST00000365579 123 ntBASIC1.2□□□□□ -2.22
KRT39Q6A163 MIR1285-1-201ENST00000408593 84 ntBASIC1.2□□□□□ -2.22
KRT39Q6A163 SNORD111.1-201ENST00000516421 86 ntBASIC1.2□□□□□ -2.22
KRT39Q6A163 RNU7-115P-201ENST00000516433 55 ntBASIC1.2□□□□□ -2.22
KRT39Q6A163 RNU7-116P-201ENST00000516940 62 ntBASIC1.2□□□□□ -2.22
KRT39Q6A163 MIR4719-201ENST00000585233 84 ntBASIC1.2□□□□□ -2.22
KRT39Q6A163 POLR3GP1-201ENST00000594073 261 ntBASIC1.2□□□□□ -2.22
KRT39Q6A163 AL357312.1-201ENST00000603879 298 ntBASIC1.2□□□□□ -2.22
KRT39Q6A163 AL353621.2-201ENST00000605340 133 ntBASIC1.2□□□□□ -2.22
KRT39Q6A163 RNU6-1227P-201ENST00000383981 107 ntBASIC1.19□□□□□ -2.22
KRT39Q6A163 SNORA25-201ENST00000384384 134 ntBASIC1.19□□□□□ -2.22
KRT39Q6A163 MIR452-201ENST00000385020 85 ntBASIC1.19□□□□□ -2.22
KRT39Q6A163 MIR1298-201ENST00000408783 112 ntBASIC1.19□□□□□ -2.22
KRT39Q6A163 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.19□□□□□ -2.22
KRT39Q6A163 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.19□□□□□ -2.22
KRT39Q6A163 AC024067.1-201ENST00000426199 223 ntBASIC1.19□□□□□ -2.22
KRT39Q6A163 POLR2KP2-201ENST00000438155 177 ntBASIC1.19□□□□□ -2.22
KRT39Q6A163 AL603825.1-201ENST00000438481 80 ntBASIC1.19□□□□□ -2.22
KRT39Q6A163 AC245047.7-201ENST00000440265 293 ntBASIC1.19□□□□□ -2.22
KRT39Q6A163 HSPE1P25-201ENST00000455484 251 ntBASIC1.19□□□□□ -2.22
KRT39Q6A163 snoU13.25-201ENST00000458945 104 ntBASIC1.19□□□□□ -2.22
KRT39Q6A163 AC117454.1-201ENST00000491120 168 ntBASIC1.19□□□□□ -2.22
KRT39Q6A163 SEPT14P8-201ENST00000508026 178 ntBASIC1.19□□□□□ -2.22
KRT39Q6A163 AC127455.1-201ENST00000565496 145 ntBASIC1.19□□□□□ -2.22
KRT39Q6A163 AL096861.1-201ENST00000610899 123 ntBASIC1.19□□□□□ -2.22
KRT39Q6A163 MIR376A1-201ENST00000616574 68 ntBASIC1.19□□□□□ -2.22
KRT39Q6A163 MIR548AY-201ENST00000617669 107 ntBASIC1.19□□□□□ -2.22
KRT39Q6A163 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.19□□□□□ -2.22
KRT39Q6A163 Y_RNA.105-201ENST00000363182 111 ntBASIC1.18□□□□□ -2.22
KRT39Q6A163 SNORD113-8-201ENST00000363497 74 ntBASIC1.18□□□□□ -2.22
KRT39Q6A163 U8.7-201ENST00000364940 136 ntBASIC1.18□□□□□ -2.22
KRT39Q6A163 SNORD50B-201ENST00000364995 70 ntBASIC1.18□□□□□ -2.22
KRT39Q6A163 Y_RNA.327-201ENST00000365201 102 ntBASIC1.18□□□□□ -2.22
KRT39Q6A163 Y_RNA.363-201ENST00000365529 113 ntBASIC1.18□□□□□ -2.22
KRT39Q6A163 SNORA22B-201ENST00000383876 138 ntBASIC1.18□□□□□ -2.22
KRT39Q6A163 Y_RNA.418-201ENST00000384029 102 ntBASIC1.18□□□□□ -2.22
KRT39Q6A163 RNU6-1011P-201ENST00000384668 107 ntBASIC1.18□□□□□ -2.22
KRT39Q6A163 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
KRT39Q6A163 MIR548P-201ENST00000408336 84 ntBASIC1.18□□□□□ -2.22
KRT39Q6A163 MLLT10P1-201ENST00000418346 262 ntBASIC1.18□□□□□ -2.22
KRT39Q6A163 SNRPGP10-201ENST00000432323 225 ntBASIC1.18□□□□□ -2.22
KRT39Q6A163 RPS29P28-201ENST00000446439 141 ntBASIC1.18□□□□□ -2.22
KRT39Q6A163 AC108729.3-201ENST00000513484 108 ntBASIC1.18□□□□□ -2.22
KRT39Q6A163 RNU6-947P-201ENST00000516264 106 ntBASIC1.18□□□□□ -2.22
KRT39Q6A163 SNORD45.4-201ENST00000516629 73 ntBASIC1.18□□□□□ -2.22
KRT39Q6A163 Y_RNA.711-201ENST00000516993 102 ntBASIC1.18□□□□□ -2.22
KRT39Q6A163 AP003072.1-201ENST00000531740 145 ntBASIC1.18□□□□□ -2.22
KRT39Q6A163 MIR3171-201ENST00000584270 74 ntBASIC1.18□□□□□ -2.22
KRT39Q6A163 BX284668.6-201ENST00000606899 438 ntBASIC1.18□□□□□ -2.22
KRT39Q6A163 AC007742.2-201ENST00000618226 398 ntBASIC1.18□□□□□ -2.22
KRT39Q6A163 AC134503.1-201ENST00000633048 54 ntBASIC1.18□□□□□ -2.22
KRT39Q6A163 Y_RNA.128-201ENST00000363391 112 ntBASIC1.17□□□□□ -2.22
KRT39Q6A163 Y_RNA.183-201ENST00000363882 113 ntBASIC1.17□□□□□ -2.22
KRT39Q6A163 RNU6-1048P-201ENST00000364054 107 ntBASIC1.17□□□□□ -2.22
KRT39Q6A163 Y_RNA.203-201ENST00000364106 102 ntBASIC1.17□□□□□ -2.22
KRT39Q6A163 Y_RNA.326-201ENST00000365176 113 ntBASIC1.17□□□□□ -2.22
KRT39Q6A163 AC117470.1-201ENST00000381974 330 ntBASIC1.17□□□□□ -2.22
KRT39Q6A163 RNU6-969P-201ENST00000383900 105 ntBASIC1.17□□□□□ -2.22
KRT39Q6A163 RNU6-939P-201ENST00000384634 107 ntBASIC1.17□□□□□ -2.22
KRT39Q6A163 MIR516B2-201ENST00000385190 85 ntBASIC1.17□□□□□ -2.22
KRT39Q6A163 MIR618-201ENST00000385287 98 ntBASIC1.17□□□□□ -2.22
KRT39Q6A163 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.17□□□□□ -2.22
KRT39Q6A163 RNU2-14P-201ENST00000411053 191 ntBASIC1.17□□□□□ -2.22
KRT39Q6A163 U8.19-201ENST00000459095 133 ntBASIC1.17□□□□□ -2.22
KRT39Q6A163 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.17□□□□□ -2.22
KRT39Q6A163 RNA5SP404-201ENST00000517118 132 ntBASIC1.17□□□□□ -2.22
KRT39Q6A163 RNU6-897P-201ENST00000517135 105 ntBASIC1.17□□□□□ -2.22
KRT39Q6A163 AC090142.3-201ENST00000519012 385 ntBASIC1.17□□□□□ -2.22
KRT39Q6A163 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.17□□□□□ -2.22
KRT39Q6A163 MIR4498-201ENST00000577599 66 ntBASIC1.17□□□□□ -2.22
KRT39Q6A163 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
KRT39Q6A163 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
KRT39Q6A163 RNU6-801P-201ENST00000364087 105 ntBASIC1.16□□□□□ -2.22
KRT39Q6A163 SNORA25.8-201ENST00000364831 128 ntBASIC1.16□□□□□ -2.22
KRT39Q6A163 SNORA72.4-201ENST00000384174 132 ntBASIC1.16□□□□□ -2.22
KRT39Q6A163 RNU6-910P-201ENST00000390844 107 ntBASIC1.16□□□□□ -2.22
KRT39Q6A163 SNORD115-46-201ENST00000390982 71 ntBASIC1.16□□□□□ -2.22
KRT39Q6A163 RNU6-131P-201ENST00000391144 107 ntBASIC1.16□□□□□ -2.22
KRT39Q6A163 MIR1252-201ENST00000408861 65 ntBASIC1.16□□□□□ -2.22
KRT39Q6A163 RNU6-121P-201ENST00000410525 99 ntBASIC1.16□□□□□ -2.22
KRT39Q6A163 AC005534.2-201ENST00000431047 433 ntBASIC1.16□□□□□ -2.22
KRT39Q6A163 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.16□□□□□ -2.22
KRT39Q6A163 SNORA31.4-201ENST00000516049 129 ntBASIC1.16□□□□□ -2.22
KRT39Q6A163 SNORD116-28-201ENST00000516123 91 ntBASIC1.16□□□□□ -2.22
KRT39Q6A163 RNU6-496P-201ENST00000516145 99 ntBASIC1.16□□□□□ -2.22
KRT39Q6A163 MIR3192-201ENST00000584920 77 ntBASIC1.16□□□□□ -2.22
KRT39Q6A163 MIR4295-201ENST00000585286 85 ntBASIC1.16□□□□□ -2.22
KRT39Q6A163 AL359821.1-201ENST00000605519 182 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 267.1 ms