Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 RNA5SP467-201ENST00000391274 118 ntBASIC3.15□□□□□ -1.91
USPL1Q5W0Q7 AL603914.1-201ENST00000401964 204 ntBASIC3.15□□□□□ -1.91
USPL1Q5W0Q7 AL117342.1-201ENST00000404861 406 ntBASIC3.15□□□□□ -1.91
USPL1Q5W0Q7 AC007064.1-201ENST00000412238 351 ntBASIC3.15□□□□□ -1.91
USPL1Q5W0Q7 AC233266.1-201ENST00000454518 96 ntBASIC3.15□□□□□ -1.91
USPL1Q5W0Q7 snoU13.23-201ENST00000458863 104 ntBASIC3.15□□□□□ -1.91
USPL1Q5W0Q7 NDUFA4P2-201ENST00000489989 244 ntBASIC3.15□□□□□ -1.91
USPL1Q5W0Q7 RNU6-919P-201ENST00000516731 104 ntBASIC3.15□□□□□ -1.91
USPL1Q5W0Q7 AP002004.2-201ENST00000531656 154 ntBASIC3.15□□□□□ -1.91
USPL1Q5W0Q7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.15□□□□□ -1.91
USPL1Q5W0Q7 AC242852.1-201ENST00000612151 96 ntBASIC3.15□□□□□ -1.91
USPL1Q5W0Q7 AC244015.1-201ENST00000622301 99 ntBASIC3.15□□□□□ -1.91
USPL1Q5W0Q7 U6.108-201ENST00000637764 58 ntBASIC3.15□□□□□ -1.91
USPL1Q5W0Q7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
USPL1Q5W0Q7 Y_RNA.66-201ENST00000362862 102 ntBASIC3.14□□□□□ -1.91
USPL1Q5W0Q7 SNORD24-201ENST00000383884 75 ntBASIC3.14□□□□□ -1.91
USPL1Q5W0Q7 UBBP3-201ENST00000445497 241 ntBASIC3.14□□□□□ -1.91
USPL1Q5W0Q7 SNORA18.4-201ENST00000516440 124 ntBASIC3.14□□□□□ -1.91
USPL1Q5W0Q7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.14□□□□□ -1.91
USPL1Q5W0Q7 U8.1-201ENST00000362843 134 ntBASIC3.13□□□□□ -1.91
USPL1Q5W0Q7 SNORD114-6-201ENST00000364393 72 ntBASIC3.13□□□□□ -1.91
USPL1Q5W0Q7 Y_RNA.280-201ENST00000364765 112 ntBASIC3.13□□□□□ -1.91
USPL1Q5W0Q7 RNU6-1072P-201ENST00000384703 107 ntBASIC3.13□□□□□ -1.91
USPL1Q5W0Q7 RNU6-443P-201ENST00000384780 107 ntBASIC3.13□□□□□ -1.91
USPL1Q5W0Q7 AC104389.3-201ENST00000445629 235 ntBASIC3.13□□□□□ -1.91
USPL1Q5W0Q7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.13□□□□□ -1.91
USPL1Q5W0Q7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.13□□□□□ -1.91
USPL1Q5W0Q7 RNU6-1291P-201ENST00000516591 104 ntBASIC3.13□□□□□ -1.91
USPL1Q5W0Q7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.13□□□□□ -1.91
USPL1Q5W0Q7 AC026271.5-201ENST00000577873 130 ntBASIC3.13□□□□□ -1.91
USPL1Q5W0Q7 AC046143.2-201ENST00000609789 160 ntBASIC3.13□□□□□ -1.91
USPL1Q5W0Q7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
USPL1Q5W0Q7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
USPL1Q5W0Q7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
USPL1Q5W0Q7 RNU6-1292P-201ENST00000383856 107 ntBASIC3.12□□□□□ -1.91
USPL1Q5W0Q7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.12□□□□□ -1.91
USPL1Q5W0Q7 AL591806.2-201ENST00000433122 173 ntBASIC3.12□□□□□ -1.91
USPL1Q5W0Q7 MTATP6P21-201ENST00000440681 189 ntBASIC3.12□□□□□ -1.91
USPL1Q5W0Q7 MRPS17P9-201ENST00000511924 393 ntBASIC3.12□□□□□ -1.91
USPL1Q5W0Q7 RNA5SP281-201ENST00000516504 135 ntBASIC3.12□□□□□ -1.91
USPL1Q5W0Q7 AC015712.3-201ENST00000559380 164 ntBASIC3.12□□□□□ -1.91
USPL1Q5W0Q7 MIR3121-201ENST00000579680 77 ntBASIC3.12□□□□□ -1.91
USPL1Q5W0Q7 AC008507.4-201ENST00000585464 127 ntBASIC3.12□□□□□ -1.91
USPL1Q5W0Q7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
USPL1Q5W0Q7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.11□□□□□ -1.91
USPL1Q5W0Q7 SNORD56.5-201ENST00000364281 72 ntBASIC3.11□□□□□ -1.91
USPL1Q5W0Q7 Y_RNA.267-201ENST00000364679 109 ntBASIC3.11□□□□□ -1.91
USPL1Q5W0Q7 RNU6-1336P-201ENST00000383886 109 ntBASIC3.11□□□□□ -1.91
USPL1Q5W0Q7 SNORA8-201ENST00000384574 139 ntBASIC3.11□□□□□ -1.91
USPL1Q5W0Q7 MIR1262-201ENST00000408276 93 ntBASIC3.11□□□□□ -1.91
USPL1Q5W0Q7 CYCSP49-201ENST00000420810 319 ntBASIC3.11□□□□□ -1.91
USPL1Q5W0Q7 AL356320.1-201ENST00000429616 163 ntBASIC3.11□□□□□ -1.91
USPL1Q5W0Q7 FTH1P12-201ENST00000432137 551 ntBASIC3.11□□□□□ -1.91
USPL1Q5W0Q7 AL158147.1-201ENST00000443970 75 ntBASIC3.11□□□□□ -1.91
USPL1Q5W0Q7 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.11□□□□□ -1.91
USPL1Q5W0Q7 RNU6-56P-201ENST00000516986 93 ntBASIC3.11□□□□□ -1.91
USPL1Q5W0Q7 SNORA31.26-201ENST00000517250 137 ntBASIC3.11□□□□□ -1.91
USPL1Q5W0Q7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
USPL1Q5W0Q7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
USPL1Q5W0Q7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
USPL1Q5W0Q7 RNU6-1325P-201ENST00000364905 105 ntBASIC3.1□□□□□ -1.91
USPL1Q5W0Q7 MIR29C-201ENST00000385231 88 ntBASIC3.1□□□□□ -1.91
USPL1Q5W0Q7 MIR891A-201ENST00000401237 79 ntBASIC3.1□□□□□ -1.91
USPL1Q5W0Q7 AL035461.1-201ENST00000421490 332 ntBASIC3.1□□□□□ -1.91
USPL1Q5W0Q7 HMGN2P3-201ENST00000433603 273 ntBASIC3.1□□□□□ -1.91
USPL1Q5W0Q7 HMGN2P5-201ENST00000436882 273 ntBASIC3.1□□□□□ -1.91
USPL1Q5W0Q7 AL049830.1-201ENST00000468034 425 ntBASIC3.1□□□□□ -1.91
USPL1Q5W0Q7 RNU1-104P-201ENST00000517280 175 ntBASIC3.1□□□□□ -1.91
USPL1Q5W0Q7 AC007751.1-201ENST00000529260 376 ntBASIC3.1□□□□□ -1.91
USPL1Q5W0Q7 MIR1273D-201ENST00000577266 86 ntBASIC3.1□□□□□ -1.91
USPL1Q5W0Q7 U6.95-201ENST00000636931 70 ntBASIC3.1□□□□□ -1.91
USPL1Q5W0Q7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.1□□□□□ -1.91
USPL1Q5W0Q7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
USPL1Q5W0Q7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
USPL1Q5W0Q7 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
USPL1Q5W0Q7 MIR126-201ENST00000362291 85 ntBASIC3.09□□□□□ -1.91
USPL1Q5W0Q7 RNU6-888P-201ENST00000363010 101 ntBASIC3.09□□□□□ -1.91
USPL1Q5W0Q7 RNU6-647P-201ENST00000364243 107 ntBASIC3.09□□□□□ -1.91
USPL1Q5W0Q7 RNA5SP210-201ENST00000391034 120 ntBASIC3.09□□□□□ -1.91
USPL1Q5W0Q7 SNORA11.4-201ENST00000408823 129 ntBASIC3.09□□□□□ -1.91
USPL1Q5W0Q7 RNU6-1064P-201ENST00000410626 104 ntBASIC3.09□□□□□ -1.91
USPL1Q5W0Q7 AL158823.1-201ENST00000418441 478 ntBASIC3.09□□□□□ -1.91
USPL1Q5W0Q7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.09□□□□□ -1.91
USPL1Q5W0Q7 RNU7-107P-201ENST00000459121 61 ntBASIC3.09□□□□□ -1.91
USPL1Q5W0Q7 AC103810.6-201ENST00000606708 136 ntBASIC3.09□□□□□ -1.91
USPL1Q5W0Q7 MIR3914-2-201ENST00000637339 95 ntBASIC3.09□□□□□ -1.91
USPL1Q5W0Q7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
USPL1Q5W0Q7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.08□□□□□ -1.92
USPL1Q5W0Q7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
USPL1Q5W0Q7 RNA5SP493-201ENST00000364115 91 ntBASIC3.08□□□□□ -1.92
USPL1Q5W0Q7 SNORA12.1-201ENST00000390873 148 ntBASIC3.08□□□□□ -1.92
USPL1Q5W0Q7 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.08□□□□□ -1.92
USPL1Q5W0Q7 Y_RNA.690-201ENST00000516603 95 ntBASIC3.08□□□□□ -1.92
USPL1Q5W0Q7 MIR4762-201ENST00000585261 75 ntBASIC3.08□□□□□ -1.92
USPL1Q5W0Q7 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.08□□□□□ -1.92
USPL1Q5W0Q7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
USPL1Q5W0Q7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
USPL1Q5W0Q7 Y_RNA.52-201ENST00000362760 96 ntBASIC3.07□□□□□ -1.92
USPL1Q5W0Q7 Y_RNA.114-201ENST00000363265 113 ntBASIC3.07□□□□□ -1.92
USPL1Q5W0Q7 MIR522-201ENST00000385071 87 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms