Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 Y_RNA.336-201ENST00000365307 109 ntBASIC1.34□□□□□ -2.19
CCDC30Q5VVM6 Y_RNA.445-201ENST00000384168 102 ntBASIC1.34□□□□□ -2.19
CCDC30Q5VVM6 Y_RNA.460-201ENST00000384255 102 ntBASIC1.34□□□□□ -2.19
CCDC30Q5VVM6 RNU6-130P-201ENST00000411112 103 ntBASIC1.34□□□□□ -2.19
CCDC30Q5VVM6 PIGPP3-201ENST00000425307 415 ntBASIC1.34□□□□□ -2.19
CCDC30Q5VVM6 AC245047.7-201ENST00000440265 293 ntBASIC1.34□□□□□ -2.19
CCDC30Q5VVM6 HMGN2P32-201ENST00000444648 269 ntBASIC1.34□□□□□ -2.19
CCDC30Q5VVM6 LINC01399-202ENST00000458450 244 ntBASIC1.34□□□□□ -2.19
CCDC30Q5VVM6 SNORA31.2-201ENST00000516019 134 ntBASIC1.34□□□□□ -2.19
CCDC30Q5VVM6 FAM106DP-201ENST00000586416 501 ntBASIC1.34□□□□□ -2.19
CCDC30Q5VVM6 PART1_1.1-201ENST00000611761 217 ntBASIC1.34□□□□□ -2.19
CCDC30Q5VVM6 AC007742.2-201ENST00000618226 398 ntBASIC1.34□□□□□ -2.19
CCDC30Q5VVM6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.34□□□□□ -2.19
CCDC30Q5VVM6 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CCDC30Q5VVM6 MIR96-201ENST00000362288 78 ntBASIC1.33□□□□□ -2.2
CCDC30Q5VVM6 RNU5E-4P-201ENST00000364931 120 ntBASIC1.33□□□□□ -2.2
CCDC30Q5VVM6 RNU6-867P-201ENST00000364956 107 ntBASIC1.33□□□□□ -2.2
CCDC30Q5VVM6 AC117470.1-201ENST00000381974 330 ntBASIC1.33□□□□□ -2.2
CCDC30Q5VVM6 MIR15B-201ENST00000385045 98 ntBASIC1.33□□□□□ -2.2
CCDC30Q5VVM6 MIR1287-201ENST00000408492 90 ntBASIC1.33□□□□□ -2.2
CCDC30Q5VVM6 MIR1285-1-201ENST00000408593 84 ntBASIC1.33□□□□□ -2.2
CCDC30Q5VVM6 AL133373.1-201ENST00000497098 94 ntBASIC1.33□□□□□ -2.2
CCDC30Q5VVM6 SNORA70.22-201ENST00000517160 124 ntBASIC1.33□□□□□ -2.2
CCDC30Q5VVM6 Y_RNA.721-201ENST00000517207 102 ntBASIC1.33□□□□□ -2.2
CCDC30Q5VVM6 POLR3GP1-201ENST00000594073 261 ntBASIC1.33□□□□□ -2.2
CCDC30Q5VVM6 BX284668.6-201ENST00000606899 438 ntBASIC1.33□□□□□ -2.2
CCDC30Q5VVM6 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.33□□□□□ -2.2
CCDC30Q5VVM6 AC090574.1-201ENST00000623186 233 ntBASIC1.33□□□□□ -2.2
CCDC30Q5VVM6 Y_RNA.28-201ENST00000362554 111 ntBASIC1.32□□□□□ -2.2
CCDC30Q5VVM6 snoU2-30.1-201ENST00000365012 70 ntBASIC1.32□□□□□ -2.2
CCDC30Q5VVM6 MIR499A-201ENST00000384903 122 ntBASIC1.32□□□□□ -2.2
CCDC30Q5VVM6 SNORD12-201ENST00000391002 90 ntBASIC1.32□□□□□ -2.2
CCDC30Q5VVM6 RNU6-131P-201ENST00000391144 107 ntBASIC1.32□□□□□ -2.2
CCDC30Q5VVM6 AL590004.1-201ENST00000405321 300 ntBASIC1.32□□□□□ -2.2
CCDC30Q5VVM6 MIR1298-201ENST00000408783 112 ntBASIC1.32□□□□□ -2.2
CCDC30Q5VVM6 RNU4-30P-201ENST00000410245 143 ntBASIC1.32□□□□□ -2.2
CCDC30Q5VVM6 MRPL35P3-201ENST00000421557 364 ntBASIC1.32□□□□□ -2.2
CCDC30Q5VVM6 PMCHL1-202ENST00000423102 261 ntBASIC1.32□□□□□ -2.2
CCDC30Q5VVM6 RPS23P4-201ENST00000487908 423 ntBASIC1.32□□□□□ -2.2
CCDC30Q5VVM6 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.32□□□□□ -2.2
CCDC30Q5VVM6 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC30Q5VVM6 AC127455.1-201ENST00000565496 145 ntBASIC1.32□□□□□ -2.2
CCDC30Q5VVM6 AC087685.1-201ENST00000587507 141 ntBASIC1.32□□□□□ -2.2
CCDC30Q5VVM6 MIR6504-201ENST00000613520 61 ntBASIC1.32□□□□□ -2.2
CCDC30Q5VVM6 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.32□□□□□ -2.2
CCDC30Q5VVM6 SNORD114-27-201ENST00000363766 70 ntBASIC1.31□□□□□ -2.2
CCDC30Q5VVM6 RNU1-124P-201ENST00000363861 145 ntBASIC1.31□□□□□ -2.2
CCDC30Q5VVM6 Y_RNA.183-201ENST00000363882 113 ntBASIC1.31□□□□□ -2.2
CCDC30Q5VVM6 Y_RNA.383-201ENST00000383855 97 ntBASIC1.31□□□□□ -2.2
CCDC30Q5VVM6 SNRPGP10-201ENST00000432323 225 ntBASIC1.31□□□□□ -2.2
CCDC30Q5VVM6 POLR2KP2-201ENST00000438155 177 ntBASIC1.31□□□□□ -2.2
CCDC30Q5VVM6 RPS29P28-201ENST00000446439 141 ntBASIC1.31□□□□□ -2.2
CCDC30Q5VVM6 RNU7-115P-201ENST00000516433 55 ntBASIC1.31□□□□□ -2.2
CCDC30Q5VVM6 SNORD45.4-201ENST00000516629 73 ntBASIC1.31□□□□□ -2.2
CCDC30Q5VVM6 Y_RNA.715-201ENST00000517082 110 ntBASIC1.31□□□□□ -2.2
CCDC30Q5VVM6 RNA5SP404-201ENST00000517118 132 ntBASIC1.31□□□□□ -2.2
CCDC30Q5VVM6 AC136932.1-201ENST00000574771 208 ntBASIC1.31□□□□□ -2.2
CCDC30Q5VVM6 AC124312.5-201ENST00000604451 268 ntBASIC1.31□□□□□ -2.2
CCDC30Q5VVM6 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.31□□□□□ -2.2
CCDC30Q5VVM6 AL442644.1-201ENST00000454390 3105 ntBASIC1.31□□□□□ -2.2
CCDC30Q5VVM6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CCDC30Q5VVM6 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC30Q5VVM6 RNU6-1084P-201ENST00000362498 107 ntBASIC1.3□□□□□ -2.2
CCDC30Q5VVM6 Y_RNA.31-201ENST00000362574 102 ntBASIC1.3□□□□□ -2.2
CCDC30Q5VVM6 Y_RNA.222-201ENST00000364264 102 ntBASIC1.3□□□□□ -2.2
CCDC30Q5VVM6 Y_RNA.631-201ENST00000459607 101 ntBASIC1.3□□□□□ -2.2
CCDC30Q5VVM6 AC048334.1-201ENST00000477975 159 ntBASIC1.3□□□□□ -2.2
CCDC30Q5VVM6 RNU6-947P-201ENST00000516264 106 ntBASIC1.3□□□□□ -2.2
CCDC30Q5VVM6 RNU7-40P-201ENST00000516397 64 ntBASIC1.3□□□□□ -2.2
CCDC30Q5VVM6 AC136628.3-201ENST00000521868 290 ntBASIC1.3□□□□□ -2.2
CCDC30Q5VVM6 AC024405.2-202ENST00000532731 184 ntBASIC1.3□□□□□ -2.2
CCDC30Q5VVM6 MIR548AY-201ENST00000617669 107 ntBASIC1.3□□□□□ -2.2
CCDC30Q5VVM6 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
CCDC30Q5VVM6 Y_RNA.203-201ENST00000364106 102 ntBASIC1.29□□□□□ -2.2
CCDC30Q5VVM6 RNU4-38P-201ENST00000364472 129 ntBASIC1.29□□□□□ -2.2
CCDC30Q5VVM6 RNU6-969P-201ENST00000383900 105 ntBASIC1.29□□□□□ -2.2
CCDC30Q5VVM6 MIR136-201ENST00000385207 82 ntBASIC1.29□□□□□ -2.2
CCDC30Q5VVM6 RNU6-910P-201ENST00000390844 107 ntBASIC1.29□□□□□ -2.2
CCDC30Q5VVM6 RNU6-823P-201ENST00000391042 103 ntBASIC1.29□□□□□ -2.2
CCDC30Q5VVM6 Y_RNA.645-201ENST00000391229 102 ntBASIC1.29□□□□□ -2.2
CCDC30Q5VVM6 MIR1252-201ENST00000408861 65 ntBASIC1.29□□□□□ -2.2
CCDC30Q5VVM6 MLLT10P1-201ENST00000418346 262 ntBASIC1.29□□□□□ -2.2
CCDC30Q5VVM6 SNORD111.1-201ENST00000516421 86 ntBASIC1.29□□□□□ -2.2
CCDC30Q5VVM6 RNU6-988P-201ENST00000519081 107 ntBASIC1.29□□□□□ -2.2
CCDC30Q5VVM6 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.29□□□□□ -2.2
CCDC30Q5VVM6 Y_RNA.61-201ENST00000362835 102 ntBASIC1.28□□□□□ -2.2
CCDC30Q5VVM6 Y_RNA.128-201ENST00000363391 112 ntBASIC1.28□□□□□ -2.2
CCDC30Q5VVM6 Y_RNA.148-201ENST00000363557 117 ntBASIC1.28□□□□□ -2.2
CCDC30Q5VVM6 MIR19B1-201ENST00000384829 87 ntBASIC1.28□□□□□ -2.2
CCDC30Q5VVM6 MIR222-201ENST00000384992 110 ntBASIC1.28□□□□□ -2.2
CCDC30Q5VVM6 RNU6-308P-201ENST00000390957 107 ntBASIC1.28□□□□□ -2.2
CCDC30Q5VVM6 RNU6-101P-201ENST00000410323 104 ntBASIC1.28□□□□□ -2.2
CCDC30Q5VVM6 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC30Q5VVM6 RPL23AP54-201ENST00000495129 419 ntBASIC1.28□□□□□ -2.2
CCDC30Q5VVM6 MIR4300-201ENST00000581016 96 ntBASIC1.28□□□□□ -2.2
CCDC30Q5VVM6 MIR2681-201ENST00000581814 105 ntBASIC1.28□□□□□ -2.2
CCDC30Q5VVM6 AC136443.5-201ENST00000603741 370 ntBASIC1.28□□□□□ -2.2
CCDC30Q5VVM6 MIR376A1-201ENST00000616574 68 ntBASIC1.28□□□□□ -2.2
CCDC30Q5VVM6 AC134503.1-201ENST00000633048 54 ntBASIC1.28□□□□□ -2.2
CCDC30Q5VVM6 Y_RNA.136-201ENST00000363444 102 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms