Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 MT-TG-201ENST00000387429 68 ntBASIC1.92□□□□□ -2.1
RNF220Q5VTB9 RNU6-383P-201ENST00000410864 94 ntBASIC1.92□□□□□ -2.1
RNF220Q5VTB9 CYCTP-201ENST00000504253 315 ntBASIC1.92□□□□□ -2.1
RNF220Q5VTB9 RNU7-12P-201ENST00000516030 62 ntBASIC1.92□□□□□ -2.1
RNF220Q5VTB9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.92□□□□□ -2.1
RNF220Q5VTB9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.92□□□□□ -2.1
RNF220Q5VTB9 RPL23AP91-201ENST00000569211 455 ntBASIC1.92□□□□□ -2.1
RNF220Q5VTB9 MIR4435-1-201ENST00000582552 80 ntBASIC1.92□□□□□ -2.1
RNF220Q5VTB9 ICE2P2-201ENST00000483823 2787 ntBASIC1.91□□□□□ -2.1
RNF220Q5VTB9 RNU6-1084P-201ENST00000362498 107 ntBASIC1.91□□□□□ -2.1
RNF220Q5VTB9 Y_RNA.292-201ENST00000364904 97 ntBASIC1.91□□□□□ -2.1
RNF220Q5VTB9 Y_RNA.304-201ENST00000365011 112 ntBASIC1.91□□□□□ -2.1
RNF220Q5VTB9 RNU6-163P-201ENST00000384396 106 ntBASIC1.91□□□□□ -2.1
RNF220Q5VTB9 RNA5SP496-201ENST00000391240 109 ntBASIC1.91□□□□□ -2.1
RNF220Q5VTB9 MIR1278-201ENST00000408753 81 ntBASIC1.91□□□□□ -2.1
RNF220Q5VTB9 RNU6-1007P-201ENST00000516586 107 ntBASIC1.91□□□□□ -2.1
RNF220Q5VTB9 RNU6-1271P-201ENST00000517049 105 ntBASIC1.91□□□□□ -2.1
RNF220Q5VTB9 AC120024.3-201ENST00000603167 156 ntBASIC1.91□□□□□ -2.1
RNF220Q5VTB9 AL365265.1-201ENST00000621045 234 ntBASIC1.91□□□□□ -2.1
RNF220Q5VTB9 MIR6873-201ENST00000622788 63 ntBASIC1.91□□□□□ -2.1
RNF220Q5VTB9 AC027279.3-201ENST00000625055 122 ntBASIC1.91□□□□□ -2.1
RNF220Q5VTB9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RNF220Q5VTB9 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RNF220Q5VTB9 RNU4-82P-201ENST00000362443 140 ntBASIC1.9□□□□□ -2.11
RNF220Q5VTB9 Y_RNA.269-201ENST00000364685 89 ntBASIC1.9□□□□□ -2.11
RNF220Q5VTB9 MIR626-201ENST00000385032 94 ntBASIC1.9□□□□□ -2.11
RNF220Q5VTB9 RNA5SP508-201ENST00000411327 119 ntBASIC1.9□□□□□ -2.11
RNF220Q5VTB9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.9□□□□□ -2.11
RNF220Q5VTB9 AC023449.1-201ENST00000454464 154 ntBASIC1.9□□□□□ -2.11
RNF220Q5VTB9 AC005908.1-201ENST00000468701 347 ntBASIC1.9□□□□□ -2.11
RNF220Q5VTB9 SUMO2P16-201ENST00000519475 264 ntBASIC1.9□□□□□ -2.11
RNF220Q5VTB9 MIR3122-201ENST00000577243 73 ntBASIC1.9□□□□□ -2.11
RNF220Q5VTB9 MIR1273D-201ENST00000577266 86 ntBASIC1.9□□□□□ -2.11
RNF220Q5VTB9 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
RNF220Q5VTB9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
RNF220Q5VTB9 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.89□□□□□ -2.11
RNF220Q5VTB9 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RNF220Q5VTB9 RNU6-338P-201ENST00000383888 105 ntBASIC1.89□□□□□ -2.11
RNF220Q5VTB9 MIR513A1-201ENST00000385138 129 ntBASIC1.89□□□□□ -2.11
RNF220Q5VTB9 MIR891A-201ENST00000401237 79 ntBASIC1.89□□□□□ -2.11
RNF220Q5VTB9 SNORD116-28-201ENST00000516123 91 ntBASIC1.89□□□□□ -2.11
RNF220Q5VTB9 RNU4-71P-201ENST00000516258 113 ntBASIC1.89□□□□□ -2.11
RNF220Q5VTB9 RNU6-111P-201ENST00000517179 105 ntBASIC1.89□□□□□ -2.11
RNF220Q5VTB9 DEFB122-202ENST00000569013 197 ntBASIC1.89□□□□□ -2.11
RNF220Q5VTB9 AC015688.6-201ENST00000577737 104 ntBASIC1.89□□□□□ -2.11
RNF220Q5VTB9 AC087685.1-201ENST00000587507 141 ntBASIC1.89□□□□□ -2.11
RNF220Q5VTB9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RNF220Q5VTB9 Y_RNA.24-201ENST00000362508 103 ntBASIC1.88□□□□□ -2.11
RNF220Q5VTB9 RNU6-833P-201ENST00000363486 107 ntBASIC1.88□□□□□ -2.11
RNF220Q5VTB9 RNU4-10P-201ENST00000364383 140 ntBASIC1.88□□□□□ -2.11
RNF220Q5VTB9 snoU2-30.1-201ENST00000365012 70 ntBASIC1.88□□□□□ -2.11
RNF220Q5VTB9 RNA5SP259-201ENST00000365541 109 ntBASIC1.88□□□□□ -2.11
RNF220Q5VTB9 PIGPP3-201ENST00000425307 415 ntBASIC1.88□□□□□ -2.11
RNF220Q5VTB9 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.88□□□□□ -2.11
RNF220Q5VTB9 HSPE1P24-201ENST00000450782 238 ntBASIC1.88□□□□□ -2.11
RNF220Q5VTB9 SNORD11-201ENST00000459124 84 ntBASIC1.88□□□□□ -2.11
RNF220Q5VTB9 AC114811.1-201ENST00000507207 168 ntBASIC1.88□□□□□ -2.11
RNF220Q5VTB9 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.88□□□□□ -2.11
RNF220Q5VTB9 RNU6-1116P-201ENST00000517269 99 ntBASIC1.88□□□□□ -2.11
RNF220Q5VTB9 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.88□□□□□ -2.11
RNF220Q5VTB9 AC100767.1-201ENST00000528178 123 ntBASIC1.88□□□□□ -2.11
RNF220Q5VTB9 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.88□□□□□ -2.11
RNF220Q5VTB9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.88□□□□□ -2.11
RNF220Q5VTB9 MIR8063-201ENST00000621930 81 ntBASIC1.88□□□□□ -2.11
RNF220Q5VTB9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.88□□□□□ -2.11
RNF220Q5VTB9 AC092881.1-201ENST00000638218 2733 ntBASIC1.88□□□□□ -2.11
RNF220Q5VTB9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RNF220Q5VTB9 Y_RNA.262-201ENST00000364641 102 ntBASIC1.87□□□□□ -2.11
RNF220Q5VTB9 RNY4P28-201ENST00000365281 93 ntBASIC1.87□□□□□ -2.11
RNF220Q5VTB9 Y_RNA.476-201ENST00000384347 108 ntBASIC1.87□□□□□ -2.11
RNF220Q5VTB9 MIR934-201ENST00000401241 83 ntBASIC1.87□□□□□ -2.11
RNF220Q5VTB9 AL139156.1-201ENST00000412785 841 ntBASIC1.87□□□□□ -2.11
RNF220Q5VTB9 SNORD45.4-201ENST00000516629 73 ntBASIC1.87□□□□□ -2.11
RNF220Q5VTB9 IGKV3-31-201ENST00000523109 329 ntBASIC1.87□□□□□ -2.11
RNF220Q5VTB9 AC110588.1-201ENST00000559699 137 ntBASIC1.87□□□□□ -2.11
RNF220Q5VTB9 MIR4778-201ENST00000577635 80 ntBASIC1.87□□□□□ -2.11
RNF220Q5VTB9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.87□□□□□ -2.11
RNF220Q5VTB9 MIR4298-201ENST00000584380 73 ntBASIC1.87□□□□□ -2.11
RNF220Q5VTB9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.87□□□□□ -2.11
RNF220Q5VTB9 AC011921.3-201ENST00000605540 361 ntBASIC1.87□□□□□ -2.11
RNF220Q5VTB9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
RNF220Q5VTB9 Y_RNA.242-201ENST00000364473 110 ntBASIC1.86□□□□□ -2.11
RNF220Q5VTB9 SNORD50B-201ENST00000364995 70 ntBASIC1.86□□□□□ -2.11
RNF220Q5VTB9 RN7SKP101-201ENST00000411376 320 ntBASIC1.86□□□□□ -2.11
RNF220Q5VTB9 COX6CP14-201ENST00000469580 174 ntBASIC1.86□□□□□ -2.11
RNF220Q5VTB9 NDUFA4P2-201ENST00000489989 244 ntBASIC1.86□□□□□ -2.11
RNF220Q5VTB9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.86□□□□□ -2.11
RNF220Q5VTB9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.86□□□□□ -2.11
RNF220Q5VTB9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
RNF220Q5VTB9 ZNF355P-201ENST00000427301 3216 ntBASIC1.85□□□□□ -2.11
RNF220Q5VTB9 SNORD33-201ENST00000362761 85 ntBASIC1.85□□□□□ -2.11
RNF220Q5VTB9 RNU6-199P-201ENST00000362954 107 ntBASIC1.85□□□□□ -2.11
RNF220Q5VTB9 RNY1-201ENST00000364228 113 ntBASIC1.85□□□□□ -2.11
RNF220Q5VTB9 SNORD1A-201ENST00000364968 72 ntBASIC1.85□□□□□ -2.11
RNF220Q5VTB9 HMGN2P32-201ENST00000444648 269 ntBASIC1.85□□□□□ -2.11
RNF220Q5VTB9 AC093850.1-201ENST00000454121 251 ntBASIC1.85□□□□□ -2.11
RNF220Q5VTB9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.85□□□□□ -2.11
RNF220Q5VTB9 AL021707.8-201ENST00000609428 183 ntBASIC1.85□□□□□ -2.11
RNF220Q5VTB9 AL590808.1-201ENST00000618696 141 ntBASIC1.85□□□□□ -2.11
RNF220Q5VTB9 MIR219B-201ENST00000637023 88 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms