Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.34□□□□□ -2.62
NUP188Q5SRE5 SNORD70.1-201ENST00000391007 85 ntBASIC-1.34□□□□□ -2.62
NUP188Q5SRE5 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.34□□□□□ -2.62
NUP188Q5SRE5 BX276092.1-201ENST00000427368 251 ntBASIC-1.34□□□□□ -2.62
NUP188Q5SRE5 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.34□□□□□ -2.62
NUP188Q5SRE5 HMGN2P32-201ENST00000444648 269 ntBASIC-1.34□□□□□ -2.62
NUP188Q5SRE5 RNU2-11P-201ENST00000459191 187 ntBASIC-1.34□□□□□ -2.62
NUP188Q5SRE5 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.34□□□□□ -2.62
NUP188Q5SRE5 AC116353.3-201ENST00000511215 249 ntBASIC-1.34□□□□□ -2.62
NUP188Q5SRE5 RNU6-706P-201ENST00000517229 104 ntBASIC-1.34□□□□□ -2.62
NUP188Q5SRE5 AL133255.1-201ENST00000606374 441 ntBASIC-1.34□□□□□ -2.62
NUP188Q5SRE5 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.35□□□□□ -2.62
NUP188Q5SRE5 SNORD114-7-201ENST00000362520 77 ntBASIC-1.35□□□□□ -2.62
NUP188Q5SRE5 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.35□□□□□ -2.62
NUP188Q5SRE5 RNU6-47P-201ENST00000383866 107 ntBASIC-1.35□□□□□ -2.62
NUP188Q5SRE5 RNU6-442P-201ENST00000383968 104 ntBASIC-1.35□□□□□ -2.62
NUP188Q5SRE5 RNU6-550P-201ENST00000391057 101 ntBASIC-1.35□□□□□ -2.62
NUP188Q5SRE5 RNU4-83P-201ENST00000410863 133 ntBASIC-1.35□□□□□ -2.62
NUP188Q5SRE5 AL512286.1-201ENST00000439244 400 ntBASIC-1.35□□□□□ -2.62
NUP188Q5SRE5 RPL39P5-202ENST00000512505 151 ntBASIC-1.35□□□□□ -2.62
NUP188Q5SRE5 RNU6-612P-201ENST00000516909 102 ntBASIC-1.35□□□□□ -2.62
NUP188Q5SRE5 RNU6-958P-201ENST00000516995 106 ntBASIC-1.35□□□□□ -2.62
NUP188Q5SRE5 AC023510.2-201ENST00000622162 746 ntBASIC-1.35□□□□□ -2.62
NUP188Q5SRE5 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.35□□□□□ -2.62
NUP188Q5SRE5 RNU6-403P-201ENST00000363163 104 ntBASIC-1.35□□□□□ -2.63
NUP188Q5SRE5 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.35□□□□□ -2.63
NUP188Q5SRE5 MIR487A-201ENST00000385009 80 ntBASIC-1.35□□□□□ -2.63
NUP188Q5SRE5 MT-TY-201ENST00000387409 66 ntBASIC-1.35□□□□□ -2.63
NUP188Q5SRE5 AC236972.2-201ENST00000434979 310 ntBASIC-1.35□□□□□ -2.63
NUP188Q5SRE5 RNU6-490P-201ENST00000362985 107 ntBASIC-1.36□□□□□ -2.63
NUP188Q5SRE5 RNU6-715P-201ENST00000365204 103 ntBASIC-1.36□□□□□ -2.63
NUP188Q5SRE5 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-1.36□□□□□ -2.63
NUP188Q5SRE5 RPL39P25-201ENST00000449384 154 ntBASIC-1.36□□□□□ -2.63
NUP188Q5SRE5 HSPE1P23-201ENST00000509838 286 ntBASIC-1.36□□□□□ -2.63
NUP188Q5SRE5 RNU6-107P-201ENST00000516643 102 ntBASIC-1.36□□□□□ -2.63
NUP188Q5SRE5 AC005771.1-201ENST00000585581 349 ntBASIC-1.36□□□□□ -2.63
NUP188Q5SRE5 AC022418.1-201ENST00000624118 445 ntBASIC-1.36□□□□□ -2.63
NUP188Q5SRE5 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.37□□□□□ -2.63
NUP188Q5SRE5 RNU6-1303P-201ENST00000364841 107 ntBASIC-1.37□□□□□ -2.63
NUP188Q5SRE5 RNU6-784P-201ENST00000384330 106 ntBASIC-1.37□□□□□ -2.63
NUP188Q5SRE5 MIR588-201ENST00000384900 83 ntBASIC-1.37□□□□□ -2.63
NUP188Q5SRE5 AC021146.9-201ENST00000512503 156 ntBASIC-1.37□□□□□ -2.63
NUP188Q5SRE5 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.37□□□□□ -2.63
NUP188Q5SRE5 AC022616.6-201ENST00000520479 119 ntBASIC-1.37□□□□□ -2.63
NUP188Q5SRE5 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.37□□□□□ -2.63
NUP188Q5SRE5 RNU6-85P-201ENST00000605989 107 ntBASIC-1.37□□□□□ -2.63
NUP188Q5SRE5 AC002044.1-201ENST00000606707 158 ntBASIC-1.37□□□□□ -2.63
NUP188Q5SRE5 AL121757.2-201ENST00000611223 313 ntBASIC-1.37□□□□□ -2.63
NUP188Q5SRE5 MIR6082-201ENST00000613604 109 ntBASIC-1.37□□□□□ -2.63
NUP188Q5SRE5 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.37□□□□□ -2.63
NUP188Q5SRE5 SNORD73A-201ENST00000386062 65 ntBASIC-1.37□□□□□ -2.63
NUP188Q5SRE5 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.37□□□□□ -2.63
NUP188Q5SRE5 MTATP6P14-201ENST00000455189 673 ntBASIC-1.37□□□□□ -2.63
NUP188Q5SRE5 RNU6-329P-201ENST00000459618 107 ntBASIC-1.37□□□□□ -2.63
NUP188Q5SRE5 AC011352.1-201ENST00000512300 793 ntBASIC-1.37□□□□□ -2.63
NUP188Q5SRE5 RNU6-334P-201ENST00000517072 102 ntBASIC-1.37□□□□□ -2.63
NUP188Q5SRE5 MIR3684-201ENST00000579779 74 ntBASIC-1.37□□□□□ -2.63
NUP188Q5SRE5 MIR4499-201ENST00000584834 69 ntBASIC-1.37□□□□□ -2.63
NUP188Q5SRE5 AC009248.2-201ENST00000619826 254 ntBASIC-1.37□□□□□ -2.63
NUP188Q5SRE5 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.38□□□□□ -2.63
NUP188Q5SRE5 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.38□□□□□ -2.63
NUP188Q5SRE5 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.38□□□□□ -2.63
NUP188Q5SRE5 SNORA25.10-201ENST00000515926 124 ntBASIC-1.38□□□□□ -2.63
NUP188Q5SRE5 RNA5SP169-201ENST00000517268 117 ntBASIC-1.38□□□□□ -2.63
NUP188Q5SRE5 AC091144.1-201ENST00000519573 138 ntBASIC-1.38□□□□□ -2.63
NUP188Q5SRE5 SNORA1-201ENST00000384107 130 ntBASIC-1.39□□□□□ -2.63
NUP188Q5SRE5 RNU6-1029P-201ENST00000384109 107 ntBASIC-1.39□□□□□ -2.63
NUP188Q5SRE5 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.39□□□□□ -2.63
NUP188Q5SRE5 RNU7-67P-201ENST00000459003 62 ntBASIC-1.39□□□□□ -2.63
NUP188Q5SRE5 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.39□□□□□ -2.63
NUP188Q5SRE5 AC018710.1-201ENST00000506509 158 ntBASIC-1.39□□□□□ -2.63
NUP188Q5SRE5 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.39□□□□□ -2.63
NUP188Q5SRE5 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.39□□□□□ -2.63
NUP188Q5SRE5 AC019226.2-201ENST00000625973 424 ntBASIC-1.39□□□□□ -2.63
NUP188Q5SRE5 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.4□□□□□ -2.63
NUP188Q5SRE5 Y_RNA.123-201ENST00000363338 102 ntBASIC-1.4□□□□□ -2.63
NUP188Q5SRE5 RNU6-926P-201ENST00000384075 107 ntBASIC-1.4□□□□□ -2.63
NUP188Q5SRE5 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.4□□□□□ -2.63
NUP188Q5SRE5 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.4□□□□□ -2.63
NUP188Q5SRE5 MTCO3P40-201ENST00000392516 676 ntBASIC-1.4□□□□□ -2.63
NUP188Q5SRE5 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.4□□□□□ -2.63
NUP188Q5SRE5 AL008987.1-201ENST00000415528 237 ntBASIC-1.4□□□□□ -2.63
NUP188Q5SRE5 AC006210.1-201ENST00000424882 111 ntBASIC-1.4□□□□□ -2.63
NUP188Q5SRE5 U8.19-201ENST00000459095 133 ntBASIC-1.4□□□□□ -2.63
NUP188Q5SRE5 U8.22-201ENST00000459141 133 ntBASIC-1.4□□□□□ -2.63
NUP188Q5SRE5 AL136370.1-201ENST00000608166 691 ntBASIC-1.4□□□□□ -2.63
NUP188Q5SRE5 AL158209.2-201ENST00000619266 216 ntBASIC-1.4□□□□□ -2.63
NUP188Q5SRE5 MIR30D-201ENST00000362283 70 ntBASIC-1.4□□□□□ -2.63
NUP188Q5SRE5 RNU6-433P-201ENST00000363216 104 ntBASIC-1.4□□□□□ -2.63
NUP188Q5SRE5 MTATP6P26-201ENST00000445926 662 ntBASIC-1.4□□□□□ -2.63
NUP188Q5SRE5 AGGF1P4-201ENST00000568249 801 ntBASIC-1.4□□□□□ -2.63
NUP188Q5SRE5 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.41□□□□□ -2.64
NUP188Q5SRE5 RNY4P27-201ENST00000363341 96 ntBASIC-1.41□□□□□ -2.64
NUP188Q5SRE5 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.41□□□□□ -2.64
NUP188Q5SRE5 MTATP6P17-201ENST00000431030 672 ntBASIC-1.41□□□□□ -2.64
NUP188Q5SRE5 SNORA13-201ENST00000458790 133 ntBASIC-1.41□□□□□ -2.64
NUP188Q5SRE5 RNU6-765P-201ENST00000516916 99 ntBASIC-1.41□□□□□ -2.64
NUP188Q5SRE5 AC022616.4-201ENST00000522985 181 ntBASIC-1.41□□□□□ -2.64
NUP188Q5SRE5 MIR8066-201ENST00000617280 78 ntBASIC-1.41□□□□□ -2.64
NUP188Q5SRE5 U6.115-201ENST00000636045 103 ntBASIC-1.41□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms