Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 U8.5-201ENST00000364528 136 ntBASIC1.72□□□□□ -2.13
RUNDC3AQ59EK9 Y_RNA.416-201ENST00000384014 113 ntBASIC1.72□□□□□ -2.13
RUNDC3AQ59EK9 AC004965.1-201ENST00000413033 213 ntBASIC1.72□□□□□ -2.13
RUNDC3AQ59EK9 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RUNDC3AQ59EK9 HMGN1P7-201ENST00000491722 313 ntBASIC1.72□□□□□ -2.13
RUNDC3AQ59EK9 RNA5SP168-201ENST00000516642 112 ntBASIC1.72□□□□□ -2.13
RUNDC3AQ59EK9 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.72□□□□□ -2.13
RUNDC3AQ59EK9 MIR4282-201ENST00000583613 67 ntBASIC1.72□□□□□ -2.13
RUNDC3AQ59EK9 AL513423.1-201ENST00000621695 132 ntBASIC1.72□□□□□ -2.13
RUNDC3AQ59EK9 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.71□□□□□ -2.13
RUNDC3AQ59EK9 MIR126-201ENST00000362291 85 ntBASIC1.71□□□□□ -2.14
RUNDC3AQ59EK9 RNU6-1123P-201ENST00000362347 106 ntBASIC1.71□□□□□ -2.14
RUNDC3AQ59EK9 SNORD68-201ENST00000363214 84 ntBASIC1.71□□□□□ -2.14
RUNDC3AQ59EK9 Y_RNA.122-201ENST00000363331 96 ntBASIC1.71□□□□□ -2.14
RUNDC3AQ59EK9 MIR1278-201ENST00000408753 81 ntBASIC1.71□□□□□ -2.14
RUNDC3AQ59EK9 Y_RNA.590-201ENST00000410140 107 ntBASIC1.71□□□□□ -2.14
RUNDC3AQ59EK9 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.71□□□□□ -2.14
RUNDC3AQ59EK9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.71□□□□□ -2.14
RUNDC3AQ59EK9 Y_RNA.673-201ENST00000516306 88 ntBASIC1.71□□□□□ -2.14
RUNDC3AQ59EK9 SNORA44.1-201ENST00000517031 108 ntBASIC1.71□□□□□ -2.14
RUNDC3AQ59EK9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.71□□□□□ -2.14
RUNDC3AQ59EK9 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.71□□□□□ -2.14
RUNDC3AQ59EK9 AC024614.2-201ENST00000577584 372 ntBASIC1.71□□□□□ -2.14
RUNDC3AQ59EK9 MIR3128-201ENST00000581957 66 ntBASIC1.71□□□□□ -2.14
RUNDC3AQ59EK9 MIR4762-201ENST00000585261 75 ntBASIC1.71□□□□□ -2.14
RUNDC3AQ59EK9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.71□□□□□ -2.14
RUNDC3AQ59EK9 MIR302D-201ENST00000362275 68 ntBASIC1.7□□□□□ -2.14
RUNDC3AQ59EK9 Y_RNA.60-201ENST00000362831 98 ntBASIC1.7□□□□□ -2.14
RUNDC3AQ59EK9 Y_RNA.76-201ENST00000362931 109 ntBASIC1.7□□□□□ -2.14
RUNDC3AQ59EK9 SNORD27-201ENST00000363981 72 ntBASIC1.7□□□□□ -2.14
RUNDC3AQ59EK9 Y_RNA.796-201ENST00000364268 102 ntBASIC1.7□□□□□ -2.14
RUNDC3AQ59EK9 Y_RNA.799-201ENST00000364992 102 ntBASIC1.7□□□□□ -2.14
RUNDC3AQ59EK9 RNU6-969P-201ENST00000383900 105 ntBASIC1.7□□□□□ -2.14
RUNDC3AQ59EK9 RNU6-144P-201ENST00000383951 107 ntBASIC1.7□□□□□ -2.14
RUNDC3AQ59EK9 Y_RNA.447-201ENST00000384184 113 ntBASIC1.7□□□□□ -2.14
RUNDC3AQ59EK9 Y_RNA.539-201ENST00000384635 107 ntBASIC1.7□□□□□ -2.14
RUNDC3AQ59EK9 MIR522-201ENST00000385071 87 ntBASIC1.7□□□□□ -2.14
RUNDC3AQ59EK9 MIR660-201ENST00000385235 97 ntBASIC1.7□□□□□ -2.14
RUNDC3AQ59EK9 RNU6-1116P-201ENST00000517269 99 ntBASIC1.7□□□□□ -2.14
RUNDC3AQ59EK9 AC015688.6-201ENST00000577737 104 ntBASIC1.7□□□□□ -2.14
RUNDC3AQ59EK9 MIR3198-2-201ENST00000577868 80 ntBASIC1.7□□□□□ -2.14
RUNDC3AQ59EK9 RNU6-1209P-201ENST00000363655 107 ntBASIC1.69□□□□□ -2.14
RUNDC3AQ59EK9 RNU4-10P-201ENST00000364383 140 ntBASIC1.69□□□□□ -2.14
RUNDC3AQ59EK9 Y_RNA.293-201ENST00000364908 93 ntBASIC1.69□□□□□ -2.14
RUNDC3AQ59EK9 RNU6-383P-201ENST00000410864 94 ntBASIC1.69□□□□□ -2.14
RUNDC3AQ59EK9 SNRPGP10-201ENST00000432323 225 ntBASIC1.69□□□□□ -2.14
RUNDC3AQ59EK9 AC008834.1-201ENST00000511612 175 ntBASIC1.69□□□□□ -2.14
RUNDC3AQ59EK9 SNORD3E-202ENST00000627253 216 ntBASIC1.69□□□□□ -2.14
RUNDC3AQ59EK9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
RUNDC3AQ59EK9 Y_RNA.20-201ENST00000362479 113 ntBASIC1.68□□□□□ -2.14
RUNDC3AQ59EK9 RNU6-338P-201ENST00000383888 105 ntBASIC1.68□□□□□ -2.14
RUNDC3AQ59EK9 snoU13.9-201ENST00000458927 103 ntBASIC1.68□□□□□ -2.14
RUNDC3AQ59EK9 NDUFA4P2-201ENST00000489989 244 ntBASIC1.68□□□□□ -2.14
RUNDC3AQ59EK9 SNORD116-28-201ENST00000516123 91 ntBASIC1.68□□□□□ -2.14
RUNDC3AQ59EK9 RNU6-1023P-201ENST00000516137 106 ntBASIC1.68□□□□□ -2.14
RUNDC3AQ59EK9 Y_RNA.679-201ENST00000516416 91 ntBASIC1.68□□□□□ -2.14
RUNDC3AQ59EK9 AC100767.1-201ENST00000528178 123 ntBASIC1.68□□□□□ -2.14
RUNDC3AQ59EK9 MIR4778-201ENST00000577635 80 ntBASIC1.68□□□□□ -2.14
RUNDC3AQ59EK9 MIR3618-201ENST00000580330 88 ntBASIC1.68□□□□□ -2.14
RUNDC3AQ59EK9 AC120024.3-201ENST00000603167 156 ntBASIC1.68□□□□□ -2.14
RUNDC3AQ59EK9 AC011921.3-201ENST00000605540 361 ntBASIC1.68□□□□□ -2.14
RUNDC3AQ59EK9 BX284668.6-201ENST00000606899 438 ntBASIC1.68□□□□□ -2.14
RUNDC3AQ59EK9 ICE2P2-201ENST00000483823 2787 ntBASIC1.68□□□□□ -2.14
RUNDC3AQ59EK9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.67□□□□□ -2.14
RUNDC3AQ59EK9 MIR513A1-201ENST00000385138 129 ntBASIC1.67□□□□□ -2.14
RUNDC3AQ59EK9 SNORD58.1-201ENST00000391313 66 ntBASIC1.67□□□□□ -2.14
RUNDC3AQ59EK9 MLLT10P1-201ENST00000418346 262 ntBASIC1.67□□□□□ -2.14
RUNDC3AQ59EK9 RPL30P13-201ENST00000418873 348 ntBASIC1.67□□□□□ -2.14
RUNDC3AQ59EK9 SNORD11-201ENST00000459124 84 ntBASIC1.67□□□□□ -2.14
RUNDC3AQ59EK9 RPS29P11-201ENST00000496507 171 ntBASIC1.67□□□□□ -2.14
RUNDC3AQ59EK9 CYCTP-201ENST00000504253 315 ntBASIC1.67□□□□□ -2.14
RUNDC3AQ59EK9 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.67□□□□□ -2.14
RUNDC3AQ59EK9 SUMO2P16-201ENST00000519475 264 ntBASIC1.67□□□□□ -2.14
RUNDC3AQ59EK9 DEFB122-202ENST00000569013 197 ntBASIC1.67□□□□□ -2.14
RUNDC3AQ59EK9 RPL23AP91-201ENST00000569211 455 ntBASIC1.67□□□□□ -2.14
RUNDC3AQ59EK9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.67□□□□□ -2.14
RUNDC3AQ59EK9 MIR4298-201ENST00000584380 73 ntBASIC1.67□□□□□ -2.14
RUNDC3AQ59EK9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
RUNDC3AQ59EK9 MIR367-201ENST00000362299 68 ntBASIC1.66□□□□□ -2.14
RUNDC3AQ59EK9 RNA5SP363-201ENST00000365072 115 ntBASIC1.66□□□□□ -2.14
RUNDC3AQ59EK9 Y_RNA.478-201ENST00000384358 107 ntBASIC1.66□□□□□ -2.14
RUNDC3AQ59EK9 RNU6-997P-201ENST00000384725 107 ntBASIC1.66□□□□□ -2.14
RUNDC3AQ59EK9 MIR526A2-201ENST00000390198 65 ntBASIC1.66□□□□□ -2.14
RUNDC3AQ59EK9 RNU6-131P-201ENST00000391144 107 ntBASIC1.66□□□□□ -2.14
RUNDC3AQ59EK9 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.66□□□□□ -2.14
RUNDC3AQ59EK9 PIGPP3-201ENST00000425307 415 ntBASIC1.66□□□□□ -2.14
RUNDC3AQ59EK9 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.66□□□□□ -2.14
RUNDC3AQ59EK9 AC003989.2-201ENST00000440224 169 ntBASIC1.66□□□□□ -2.14
RUNDC3AQ59EK9 HSPE1P24-201ENST00000450782 238 ntBASIC1.66□□□□□ -2.14
RUNDC3AQ59EK9 AC093850.1-201ENST00000454121 251 ntBASIC1.66□□□□□ -2.14
RUNDC3AQ59EK9 Y_RNA.638-201ENST00000459374 113 ntBASIC1.66□□□□□ -2.14
RUNDC3AQ59EK9 AC114811.1-201ENST00000507207 168 ntBASIC1.66□□□□□ -2.14
RUNDC3AQ59EK9 RNU7-12P-201ENST00000516030 62 ntBASIC1.66□□□□□ -2.14
RUNDC3AQ59EK9 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.66□□□□□ -2.14
RUNDC3AQ59EK9 MIR4724-201ENST00000579485 89 ntBASIC1.66□□□□□ -2.14
RUNDC3AQ59EK9 MIR2681-201ENST00000581814 105 ntBASIC1.66□□□□□ -2.14
RUNDC3AQ59EK9 AL021707.8-201ENST00000609428 183 ntBASIC1.66□□□□□ -2.14
RUNDC3AQ59EK9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.66□□□□□ -2.14
RUNDC3AQ59EK9 AL442067.1-201ENST00000613261 223 ntBASIC1.66□□□□□ -2.14
RUNDC3AQ59EK9 JPX_2.1-201ENST00000614161 69 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 148.4 ms