Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 snoU13.27-201ENST00000459278 104 ntBASIC2.39□□□□□ -2.03
FNDC3BQ53EP0 SNORA31.17-201ENST00000516953 127 ntBASIC2.39□□□□□ -2.03
FNDC3BQ53EP0 AC109810.1-201ENST00000534066 224 ntBASIC2.39□□□□□ -2.03
FNDC3BQ53EP0 MRPS18CP4-201ENST00000535821 231 ntBASIC2.39□□□□□ -2.03
FNDC3BQ53EP0 AC007336.1-201ENST00000576365 3828 ntBASIC2.39□□□□□ -2.03
FNDC3BQ53EP0 AL021707.8-201ENST00000609428 183 ntBASIC2.39□□□□□ -2.03
FNDC3BQ53EP0 MIR6873-201ENST00000622788 63 ntBASIC2.39□□□□□ -2.03
FNDC3BQ53EP0 AC016717.2-201ENST00000609089 5141 ntBASIC2.39□□□□□ -2.03
FNDC3BQ53EP0 RNU6-312P-201ENST00000364629 107 ntBASIC2.38□□□□□ -2.03
FNDC3BQ53EP0 Y_RNA.357-201ENST00000365487 109 ntBASIC2.38□□□□□ -2.03
FNDC3BQ53EP0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
FNDC3BQ53EP0 RNA5SP212-201ENST00000391223 107 ntBASIC2.38□□□□□ -2.03
FNDC3BQ53EP0 SNORA79-201ENST00000408376 140 ntBASIC2.38□□□□□ -2.03
FNDC3BQ53EP0 AL356320.1-201ENST00000429616 163 ntBASIC2.38□□□□□ -2.03
FNDC3BQ53EP0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.38□□□□□ -2.03
FNDC3BQ53EP0 ICE2P2-201ENST00000483823 2787 ntBASIC2.38□□□□□ -2.03
FNDC3BQ53EP0 AC008555.8-201ENST00000623602 2168 ntBASIC2.37□□□□□ -2.03
FNDC3BQ53EP0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
FNDC3BQ53EP0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
FNDC3BQ53EP0 MIR15B-201ENST00000385045 98 ntBASIC2.37□□□□□ -2.03
FNDC3BQ53EP0 RN7SKP223-201ENST00000410582 62 ntBASIC2.37□□□□□ -2.03
FNDC3BQ53EP0 RPS12P2-201ENST00000439728 269 ntBASIC2.37□□□□□ -2.03
FNDC3BQ53EP0 OR9P1P-201ENST00000496431 281 ntBASIC2.37□□□□□ -2.03
FNDC3BQ53EP0 AC074198.2-201ENST00000508153 258 ntBASIC2.37□□□□□ -2.03
FNDC3BQ53EP0 RNU7-149P-201ENST00000516739 59 ntBASIC2.37□□□□□ -2.03
FNDC3BQ53EP0 MIR3670-2-201ENST00000582974 65 ntBASIC2.37□□□□□ -2.03
FNDC3BQ53EP0 MIR3670-1-201ENST00000584160 65 ntBASIC2.37□□□□□ -2.03
FNDC3BQ53EP0 MIR3670-3-201ENST00000584855 65 ntBASIC2.37□□□□□ -2.03
FNDC3BQ53EP0 AC067747.1-201ENST00000608026 250 ntBASIC2.37□□□□□ -2.03
FNDC3BQ53EP0 MIR3670-4-201ENST00000612260 65 ntBASIC2.37□□□□□ -2.03
FNDC3BQ53EP0 Pinc.1-201ENST00000616452 154 ntBASIC2.37□□□□□ -2.03
FNDC3BQ53EP0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.37□□□□□ -2.03
FNDC3BQ53EP0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
FNDC3BQ53EP0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
FNDC3BQ53EP0 Y_RNA.23-201ENST00000362496 106 ntBASIC2.36□□□□□ -2.03
FNDC3BQ53EP0 Y_RNA.242-201ENST00000364473 110 ntBASIC2.36□□□□□ -2.03
FNDC3BQ53EP0 MIR504-201ENST00000385065 83 ntBASIC2.36□□□□□ -2.03
FNDC3BQ53EP0 MIR522-201ENST00000385071 87 ntBASIC2.36□□□□□ -2.03
FNDC3BQ53EP0 FTH1P12-201ENST00000432137 551 ntBASIC2.36□□□□□ -2.03
FNDC3BQ53EP0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
FNDC3BQ53EP0 RNU6-1299P-201ENST00000516316 100 ntBASIC2.36□□□□□ -2.03
FNDC3BQ53EP0 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
FNDC3BQ53EP0 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
FNDC3BQ53EP0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
FNDC3BQ53EP0 Y_RNA.180-201ENST00000363867 113 ntBASIC2.35□□□□□ -2.03
FNDC3BQ53EP0 RNU6-163P-201ENST00000384396 106 ntBASIC2.35□□□□□ -2.03
FNDC3BQ53EP0 RNU6-1031P-201ENST00000384773 107 ntBASIC2.35□□□□□ -2.03
FNDC3BQ53EP0 MIR548I3-201ENST00000408378 149 ntBASIC2.35□□□□□ -2.03
FNDC3BQ53EP0 MIR548I1-201ENST00000408810 149 ntBASIC2.35□□□□□ -2.03
FNDC3BQ53EP0 RPL23AP6-201ENST00000446637 472 ntBASIC2.35□□□□□ -2.03
FNDC3BQ53EP0 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.35□□□□□ -2.03
FNDC3BQ53EP0 NDUFA4P2-201ENST00000489989 244 ntBASIC2.35□□□□□ -2.03
FNDC3BQ53EP0 RNU6-561P-201ENST00000516222 102 ntBASIC2.35□□□□□ -2.03
FNDC3BQ53EP0 MIR1273D-201ENST00000577266 86 ntBASIC2.35□□□□□ -2.03
FNDC3BQ53EP0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.35□□□□□ -2.03
FNDC3BQ53EP0 AC087685.1-201ENST00000587507 141 ntBASIC2.35□□□□□ -2.03
FNDC3BQ53EP0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.35□□□□□ -2.03
FNDC3BQ53EP0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
FNDC3BQ53EP0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
FNDC3BQ53EP0 SNORA25.6-201ENST00000364121 118 ntBASIC2.34□□□□□ -2.03
FNDC3BQ53EP0 snoU2-30.1-201ENST00000365012 70 ntBASIC2.34□□□□□ -2.03
FNDC3BQ53EP0 Y_RNA.432-201ENST00000384087 111 ntBASIC2.34□□□□□ -2.03
FNDC3BQ53EP0 RNU6-360P-201ENST00000390944 104 ntBASIC2.34□□□□□ -2.03
FNDC3BQ53EP0 RNU2-70P-201ENST00000410718 179 ntBASIC2.34□□□□□ -2.03
FNDC3BQ53EP0 RNU2-55P-201ENST00000411146 174 ntBASIC2.34□□□□□ -2.03
FNDC3BQ53EP0 SEPT7P4-201ENST00000437076 306 ntBASIC2.34□□□□□ -2.03
FNDC3BQ53EP0 SNRPGP8-201ENST00000454064 226 ntBASIC2.34□□□□□ -2.03
FNDC3BQ53EP0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.34□□□□□ -2.03
FNDC3BQ53EP0 SNORD77.4-201ENST00000516158 81 ntBASIC2.34□□□□□ -2.03
FNDC3BQ53EP0 SCARNA16.3-201ENST00000516595 184 ntBASIC2.34□□□□□ -2.03
FNDC3BQ53EP0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.34□□□□□ -2.03
FNDC3BQ53EP0 MIR4662B-201ENST00000579498 81 ntBASIC2.34□□□□□ -2.03
FNDC3BQ53EP0 AL773524.1-201ENST00000614065 229 ntBASIC2.34□□□□□ -2.03
FNDC3BQ53EP0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.34□□□□□ -2.03
FNDC3BQ53EP0 MIR7843-201ENST00000622274 79 ntBASIC2.34□□□□□ -2.03
FNDC3BQ53EP0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
FNDC3BQ53EP0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.34□□□□□ -2.04
FNDC3BQ53EP0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
FNDC3BQ53EP0 SNORD45.3-201ENST00000363836 72 ntBASIC2.33□□□□□ -2.04
FNDC3BQ53EP0 SNORD14E-201ENST00000364009 85 ntBASIC2.33□□□□□ -2.04
FNDC3BQ53EP0 SNORA6-201ENST00000384033 151 ntBASIC2.33□□□□□ -2.04
FNDC3BQ53EP0 snoU13.26-201ENST00000459452 105 ntBASIC2.33□□□□□ -2.04
FNDC3BQ53EP0 RNU6-126P-201ENST00000516685 103 ntBASIC2.33□□□□□ -2.04
FNDC3BQ53EP0 MIR4431-201ENST00000579990 94 ntBASIC2.33□□□□□ -2.04
FNDC3BQ53EP0 MIR4648-201ENST00000580107 72 ntBASIC2.33□□□□□ -2.04
FNDC3BQ53EP0 MIR5007-201ENST00000583098 95 ntBASIC2.33□□□□□ -2.04
FNDC3BQ53EP0 MIR4762-201ENST00000585261 75 ntBASIC2.33□□□□□ -2.04
FNDC3BQ53EP0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.33□□□□□ -2.04
FNDC3BQ53EP0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.33□□□□□ -2.04
FNDC3BQ53EP0 U8.5-201ENST00000364528 136 ntBASIC2.32□□□□□ -2.04
FNDC3BQ53EP0 SNORA26-201ENST00000391286 122 ntBASIC2.32□□□□□ -2.04
FNDC3BQ53EP0 PCNPP3-201ENST00000393579 471 ntBASIC2.32□□□□□ -2.04
FNDC3BQ53EP0 AC006461.1-201ENST00000412637 326 ntBASIC2.32□□□□□ -2.04
FNDC3BQ53EP0 RPL30P13-201ENST00000418873 348 ntBASIC2.32□□□□□ -2.04
FNDC3BQ53EP0 AC244636.1-201ENST00000421152 228 ntBASIC2.32□□□□□ -2.04
FNDC3BQ53EP0 SNORD45.4-201ENST00000516629 73 ntBASIC2.32□□□□□ -2.04
FNDC3BQ53EP0 AC121758.2-201ENST00000553271 193 ntBASIC2.32□□□□□ -2.04
FNDC3BQ53EP0 MIR4524B-201ENST00000581569 115 ntBASIC2.32□□□□□ -2.04
FNDC3BQ53EP0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
FNDC3BQ53EP0 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms