Protein–RNA interactions for Protein: Q2TBA0

KLHL40, Kelch-like protein 40, humanhuman

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL40Q2TBA0 HMGN2P32-201ENST00000444648 269 ntBASIC0.35□□□□□ -2.35
KLHL40Q2TBA0 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.35□□□□□ -2.35
KLHL40Q2TBA0 AC087588.2-201ENST00000617667 426 ntBASIC0.35□□□□□ -2.35
KLHL40Q2TBA0 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
KLHL40Q2TBA0 Y_RNA.205-201ENST00000364128 113 ntBASIC0.34□□□□□ -2.36
KLHL40Q2TBA0 snoU2-30.1-201ENST00000365012 70 ntBASIC0.34□□□□□ -2.36
KLHL40Q2TBA0 MIR7-2-201ENST00000384970 110 ntBASIC0.34□□□□□ -2.36
KLHL40Q2TBA0 SNORD105-201ENST00000386910 85 ntBASIC0.34□□□□□ -2.36
KLHL40Q2TBA0 RNU6-613P-201ENST00000410412 108 ntBASIC0.34□□□□□ -2.36
KLHL40Q2TBA0 RNU6-1199P-201ENST00000411249 104 ntBASIC0.34□□□□□ -2.36
KLHL40Q2TBA0 AL390729.2-201ENST00000416137 156 ntBASIC0.34□□□□□ -2.36
KLHL40Q2TBA0 MTND4P28-201ENST00000426217 387 ntBASIC0.34□□□□□ -2.36
KLHL40Q2TBA0 AL589823.1-201ENST00000429577 183 ntBASIC0.34□□□□□ -2.36
KLHL40Q2TBA0 CHEK2P4-201ENST00000450340 246 ntBASIC0.34□□□□□ -2.36
KLHL40Q2TBA0 MIR2053-201ENST00000459295 91 ntBASIC0.34□□□□□ -2.36
KLHL40Q2TBA0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.34□□□□□ -2.36
KLHL40Q2TBA0 AC105313.1-201ENST00000509121 353 ntBASIC0.34□□□□□ -2.36
KLHL40Q2TBA0 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.34□□□□□ -2.36
KLHL40Q2TBA0 RNU6-307P-201ENST00000516743 106 ntBASIC0.34□□□□□ -2.36
KLHL40Q2TBA0 MIR6779-201ENST00000617283 64 ntBASIC0.34□□□□□ -2.36
KLHL40Q2TBA0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.34□□□□□ -2.36
KLHL40Q2TBA0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.34□□□□□ -2.36
KLHL40Q2TBA0 RNU6-369P-201ENST00000362515 102 ntBASIC0.33□□□□□ -2.36
KLHL40Q2TBA0 RNU6-99P-201ENST00000364721 107 ntBASIC0.33□□□□□ -2.36
KLHL40Q2TBA0 SNORD50B-201ENST00000364995 70 ntBASIC0.33□□□□□ -2.36
KLHL40Q2TBA0 RNY1P8-201ENST00000383970 114 ntBASIC0.33□□□□□ -2.36
KLHL40Q2TBA0 SNORA75.4-201ENST00000391278 119 ntBASIC0.33□□□□□ -2.36
KLHL40Q2TBA0 MIR1277-201ENST00000408536 78 ntBASIC0.33□□□□□ -2.36
KLHL40Q2TBA0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.33□□□□□ -2.36
KLHL40Q2TBA0 MIR548F1-201ENST00000408667 84 ntBASIC0.33□□□□□ -2.36
KLHL40Q2TBA0 Y_RNA.592-201ENST00000410274 109 ntBASIC0.33□□□□□ -2.36
KLHL40Q2TBA0 MTATP6P26-201ENST00000445926 662 ntBASIC0.33□□□□□ -2.36
KLHL40Q2TBA0 RNU6-966P-201ENST00000516479 104 ntBASIC0.33□□□□□ -2.36
KLHL40Q2TBA0 RNA5SP134-201ENST00000516492 96 ntBASIC0.33□□□□□ -2.36
KLHL40Q2TBA0 RNU6-1012P-201ENST00000516606 109 ntBASIC0.33□□□□□ -2.36
KLHL40Q2TBA0 AC006380.1-201ENST00000603598 186 ntBASIC0.33□□□□□ -2.36
KLHL40Q2TBA0 AC008133.2-201ENST00000624540 351 ntBASIC0.33□□□□□ -2.36
KLHL40Q2TBA0 MIR4251-201ENST00000635819 61 ntBASIC0.33□□□□□ -2.36
KLHL40Q2TBA0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
KLHL40Q2TBA0 SNORA72-201ENST00000384339 132 ntBASIC0.32□□□□□ -2.36
KLHL40Q2TBA0 RNU6-131P-201ENST00000391144 107 ntBASIC0.32□□□□□ -2.36
KLHL40Q2TBA0 RNU6-177P-201ENST00000411257 104 ntBASIC0.32□□□□□ -2.36
KLHL40Q2TBA0 MTCO2P12-201ENST00000427426 682 ntBASIC0.32□□□□□ -2.36
KLHL40Q2TBA0 SNRPGP10-201ENST00000432323 225 ntBASIC0.32□□□□□ -2.36
KLHL40Q2TBA0 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.32□□□□□ -2.36
KLHL40Q2TBA0 FCF1P4-201ENST00000448326 183 ntBASIC0.32□□□□□ -2.36
KLHL40Q2TBA0 RNU6-1213P-201ENST00000517075 94 ntBASIC0.32□□□□□ -2.36
KLHL40Q2TBA0 MIR1273G-201ENST00000577677 100 ntBASIC0.32□□□□□ -2.36
KLHL40Q2TBA0 AC005972.2-201ENST00000604690 348 ntBASIC0.32□□□□□ -2.36
KLHL40Q2TBA0 RBM11P1-201ENST00000604951 799 ntBASIC0.32□□□□□ -2.36
KLHL40Q2TBA0 PISRT1.1-201ENST00000616930 107 ntBASIC0.32□□□□□ -2.36
KLHL40Q2TBA0 AL669831.3-213ENST00000636676 183 ntBASIC0.32□□□□□ -2.36
KLHL40Q2TBA0 RNU6-1084P-201ENST00000362498 107 ntBASIC0.31□□□□□ -2.36
KLHL40Q2TBA0 RNU6-926P-201ENST00000384075 107 ntBASIC0.31□□□□□ -2.36
KLHL40Q2TBA0 RNY3P4-201ENST00000384428 101 ntBASIC0.31□□□□□ -2.36
KLHL40Q2TBA0 SNORD116-4-201ENST00000384733 96 ntBASIC0.31□□□□□ -2.36
KLHL40Q2TBA0 Y_RNA.577-201ENST00000384794 101 ntBASIC0.31□□□□□ -2.36
KLHL40Q2TBA0 SNORA69.1-201ENST00000390904 137 ntBASIC0.31□□□□□ -2.36
KLHL40Q2TBA0 SNORD28B-201ENST00000390993 75 ntBASIC0.31□□□□□ -2.36
KLHL40Q2TBA0 MLLT10P1-201ENST00000418346 262 ntBASIC0.31□□□□□ -2.36
KLHL40Q2TBA0 RPL30P15-201ENST00000457129 321 ntBASIC0.31□□□□□ -2.36
KLHL40Q2TBA0 U8.19-201ENST00000459095 133 ntBASIC0.31□□□□□ -2.36
KLHL40Q2TBA0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.31□□□□□ -2.36
KLHL40Q2TBA0 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.31□□□□□ -2.36
KLHL40Q2TBA0 SNORA68.3-201ENST00000515906 83 ntBASIC0.31□□□□□ -2.36
KLHL40Q2TBA0 RNU6-718P-201ENST00000516166 105 ntBASIC0.31□□□□□ -2.36
KLHL40Q2TBA0 RNU6-436P-201ENST00000516171 114 ntBASIC0.31□□□□□ -2.36
KLHL40Q2TBA0 MIR4300-201ENST00000581016 96 ntBASIC0.31□□□□□ -2.36
KLHL40Q2TBA0 AC005176.2-201ENST00000596933 147 ntBASIC0.31□□□□□ -2.36
KLHL40Q2TBA0 AC002553.4-201ENST00000616896 331 ntBASIC0.31□□□□□ -2.36
KLHL40Q2TBA0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
KLHL40Q2TBA0 Y_RNA.146-201ENST00000363549 102 ntBASIC0.3□□□□□ -2.36
KLHL40Q2TBA0 Y_RNA.168-201ENST00000363740 102 ntBASIC0.3□□□□□ -2.36
KLHL40Q2TBA0 Y_RNA.318-201ENST00000365131 97 ntBASIC0.3□□□□□ -2.36
KLHL40Q2TBA0 Y_RNA.446-201ENST00000384178 104 ntBASIC0.3□□□□□ -2.36
KLHL40Q2TBA0 RNU6-1215P-201ENST00000384441 102 ntBASIC0.3□□□□□ -2.36
KLHL40Q2TBA0 MIR625-201ENST00000385047 85 ntBASIC0.3□□□□□ -2.36
KLHL40Q2TBA0 RNA5SP95-201ENST00000410319 137 ntBASIC0.3□□□□□ -2.36
KLHL40Q2TBA0 RNU2-70P-201ENST00000410718 179 ntBASIC0.3□□□□□ -2.36
KLHL40Q2TBA0 AC069439.1-201ENST00000494739 167 ntBASIC0.3□□□□□ -2.36
KLHL40Q2TBA0 RNU6-120P-201ENST00000516077 103 ntBASIC0.3□□□□□ -2.36
KLHL40Q2TBA0 RNU6-155P-201ENST00000516347 100 ntBASIC0.3□□□□□ -2.36
KLHL40Q2TBA0 AL355375.2-201ENST00000574825 175 ntBASIC0.3□□□□□ -2.36
KLHL40Q2TBA0 MIR548AR-201ENST00000582191 57 ntBASIC0.3□□□□□ -2.36
KLHL40Q2TBA0 AC104695.3-201ENST00000604052 296 ntBASIC0.3□□□□□ -2.36
KLHL40Q2TBA0 Y_RNA.72-201ENST00000362894 103 ntBASIC0.29□□□□□ -2.36
KLHL40Q2TBA0 RNU6-324P-201ENST00000363957 106 ntBASIC0.29□□□□□ -2.36
KLHL40Q2TBA0 Y_RNA.368-201ENST00000365547 113 ntBASIC0.29□□□□□ -2.36
KLHL40Q2TBA0 Y_RNA.370-201ENST00000365589 108 ntBASIC0.29□□□□□ -2.36
KLHL40Q2TBA0 RNU6-20P-201ENST00000384106 107 ntBASIC0.29□□□□□ -2.36
KLHL40Q2TBA0 MIR140-201ENST00000385282 100 ntBASIC0.29□□□□□ -2.36
KLHL40Q2TBA0 SNORD78.2-201ENST00000391076 69 ntBASIC0.29□□□□□ -2.36
KLHL40Q2TBA0 RNU6-192P-201ENST00000391253 100 ntBASIC0.29□□□□□ -2.36
KLHL40Q2TBA0 RNU4-14P-201ENST00000410858 122 ntBASIC0.29□□□□□ -2.36
KLHL40Q2TBA0 SNRPGP14-201ENST00000435400 219 ntBASIC0.29□□□□□ -2.36
KLHL40Q2TBA0 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.29□□□□□ -2.36
KLHL40Q2TBA0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.29□□□□□ -2.36
KLHL40Q2TBA0 AC093027.1-201ENST00000546698 429 ntBASIC0.29□□□□□ -2.36
KLHL40Q2TBA0 AC091925.1-201ENST00000623204 462 ntBASIC0.29□□□□□ -2.36
KLHL40Q2TBA0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms