Protein–RNA interactions for Protein: Q16385

SSX2, Protein SSX2, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2Q16385 AC091925.1-201ENST00000623204 462 ntBASIC0.3□□□□□ -2.36
SSX2Q16385 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.29□□□□□ -2.36
SSX2Q16385 SNORD114-23-201ENST00000363536 72 ntBASIC0.29□□□□□ -2.36
SSX2Q16385 Y_RNA.168-201ENST00000363740 102 ntBASIC0.29□□□□□ -2.36
SSX2Q16385 SNORD14E-201ENST00000364009 85 ntBASIC0.29□□□□□ -2.36
SSX2Q16385 RNU6-99P-201ENST00000364721 107 ntBASIC0.29□□□□□ -2.36
SSX2Q16385 VTRNA1-3-201ENST00000365645 89 ntBASIC0.29□□□□□ -2.36
SSX2Q16385 RNU6-342P-201ENST00000384521 104 ntBASIC0.29□□□□□ -2.36
SSX2Q16385 MTCO2P27-201ENST00000420740 428 ntBASIC0.29□□□□□ -2.36
SSX2Q16385 RPL17P19-201ENST00000489069 552 ntBASIC0.29□□□□□ -2.36
SSX2Q16385 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.29□□□□□ -2.36
SSX2Q16385 MIR2355-201ENST00000517199 87 ntBASIC0.29□□□□□ -2.36
SSX2Q16385 AL355375.2-201ENST00000574825 175 ntBASIC0.29□□□□□ -2.36
SSX2Q16385 RNU6-369P-201ENST00000362515 102 ntBASIC0.28□□□□□ -2.36
SSX2Q16385 RNU6-396P-201ENST00000365369 105 ntBASIC0.28□□□□□ -2.36
SSX2Q16385 RNU6-767P-201ENST00000384132 107 ntBASIC0.28□□□□□ -2.36
SSX2Q16385 SNORD38C-201ENST00000384381 69 ntBASIC0.28□□□□□ -2.36
SSX2Q16385 MIR520F-201ENST00000384824 87 ntBASIC0.28□□□□□ -2.36
SSX2Q16385 MIR520H-201ENST00000385126 88 ntBASIC0.28□□□□□ -2.36
SSX2Q16385 MIR613-201ENST00000385248 95 ntBASIC0.28□□□□□ -2.36
SSX2Q16385 snoU13.21-201ENST00000459368 105 ntBASIC0.28□□□□□ -2.36
SSX2Q16385 NDUFA4P2-201ENST00000489989 244 ntBASIC0.28□□□□□ -2.36
SSX2Q16385 AC011352.1-201ENST00000512300 793 ntBASIC0.28□□□□□ -2.36
SSX2Q16385 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.28□□□□□ -2.36
SSX2Q16385 RNU6-155P-201ENST00000516347 100 ntBASIC0.28□□□□□ -2.36
SSX2Q16385 AL162730.1-201ENST00000605734 292 ntBASIC0.28□□□□□ -2.36
SSX2Q16385 PISRT1.1-201ENST00000616930 107 ntBASIC0.28□□□□□ -2.36
SSX2Q16385 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.27□□□□□ -2.37
SSX2Q16385 MTND4P28-201ENST00000426217 387 ntBASIC0.27□□□□□ -2.37
SSX2Q16385 U8.19-201ENST00000459095 133 ntBASIC0.27□□□□□ -2.37
SSX2Q16385 RPS29P25-201ENST00000481709 171 ntBASIC0.27□□□□□ -2.37
SSX2Q16385 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.27□□□□□ -2.37
SSX2Q16385 AC005899.2-201ENST00000584353 90 ntBASIC0.27□□□□□ -2.37
SSX2Q16385 AC005176.2-201ENST00000596933 147 ntBASIC0.27□□□□□ -2.37
SSX2Q16385 Y_RNA.393-201ENST00000383936 102 ntBASIC0.26□□□□□ -2.37
SSX2Q16385 Y_RNA.453-201ENST00000384223 109 ntBASIC0.26□□□□□ -2.37
SSX2Q16385 RNY1P4-201ENST00000384595 115 ntBASIC0.26□□□□□ -2.37
SSX2Q16385 AC015818.7-201ENST00000428754 109 ntBASIC0.26□□□□□ -2.37
SSX2Q16385 AC087499.7-201ENST00000441958 109 ntBASIC0.26□□□□□ -2.37
SSX2Q16385 AC107399.1-201ENST00000451226 265 ntBASIC0.26□□□□□ -2.37
SSX2Q16385 RPL30P15-201ENST00000457129 321 ntBASIC0.26□□□□□ -2.37
SSX2Q16385 RNU6-436P-201ENST00000516171 114 ntBASIC0.26□□□□□ -2.37
SSX2Q16385 RNU6-977P-201ENST00000516411 103 ntBASIC0.26□□□□□ -2.37
SSX2Q16385 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.26□□□□□ -2.37
SSX2Q16385 RN7SL793P-201ENST00000583259 296 ntBASIC0.26□□□□□ -2.37
SSX2Q16385 AC007742.2-201ENST00000618226 398 ntBASIC0.26□□□□□ -2.37
SSX2Q16385 AC015726.2-201ENST00000620112 122 ntBASIC0.26□□□□□ -2.37
SSX2Q16385 MIR18A-201ENST00000362310 71 ntBASIC0.25□□□□□ -2.37
SSX2Q16385 Y_RNA.370-201ENST00000365589 108 ntBASIC0.25□□□□□ -2.37
SSX2Q16385 Y_RNA.446-201ENST00000384178 104 ntBASIC0.25□□□□□ -2.37
SSX2Q16385 RNU6-510P-201ENST00000391239 108 ntBASIC0.25□□□□□ -2.37
SSX2Q16385 RNU6-1199P-201ENST00000411249 104 ntBASIC0.25□□□□□ -2.37
SSX2Q16385 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.25□□□□□ -2.37
SSX2Q16385 MTCO3P10-201ENST00000455912 772 ntBASIC0.25□□□□□ -2.37
SSX2Q16385 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.25□□□□□ -2.37
SSX2Q16385 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.25□□□□□ -2.37
SSX2Q16385 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.25□□□□□ -2.37
SSX2Q16385 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.25□□□□□ -2.37
SSX2Q16385 MIR548AO-201ENST00000579992 96 ntBASIC0.25□□□□□ -2.37
SSX2Q16385 AC048344.4-201ENST00000619744 527 ntBASIC0.25□□□□□ -2.37
SSX2Q16385 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.24□□□□□ -2.37
SSX2Q16385 Y_RNA.112-201ENST00000363250 102 ntBASIC0.24□□□□□ -2.37
SSX2Q16385 RNU6-20P-201ENST00000384106 107 ntBASIC0.24□□□□□ -2.37
SSX2Q16385 Y_RNA.482-201ENST00000384377 111 ntBASIC0.24□□□□□ -2.37
SSX2Q16385 SNORA51.10-201ENST00000384418 136 ntBASIC0.24□□□□□ -2.37
SSX2Q16385 MIR802-201ENST00000390235 94 ntBASIC0.24□□□□□ -2.37
SSX2Q16385 RNU6-205P-201ENST00000390858 107 ntBASIC0.24□□□□□ -2.37
SSX2Q16385 SNORA69.1-201ENST00000390904 137 ntBASIC0.24□□□□□ -2.37
SSX2Q16385 RNU6-192P-201ENST00000391253 100 ntBASIC0.24□□□□□ -2.37
SSX2Q16385 SNORD83.1-201ENST00000411362 77 ntBASIC0.24□□□□□ -2.37
SSX2Q16385 FCF1P4-201ENST00000448326 183 ntBASIC0.24□□□□□ -2.37
SSX2Q16385 HMGN1P10-201ENST00000474557 553 ntBASIC0.24□□□□□ -2.37
SSX2Q16385 RNU6-966P-201ENST00000516479 104 ntBASIC0.24□□□□□ -2.37
SSX2Q16385 RNU6-307P-201ENST00000516743 106 ntBASIC0.24□□□□□ -2.37
SSX2Q16385 MIR3612-201ENST00000579753 87 ntBASIC0.24□□□□□ -2.37
SSX2Q16385 AC090625.1-201ENST00000357130 210 ntBASIC0.23□□□□□ -2.37
SSX2Q16385 Y_RNA.86-201ENST00000363020 111 ntBASIC0.23□□□□□ -2.37
SSX2Q16385 RNU6-626P-201ENST00000363354 107 ntBASIC0.23□□□□□ -2.37
SSX2Q16385 RNU6-934P-201ENST00000365154 107 ntBASIC0.23□□□□□ -2.37
SSX2Q16385 Y_RNA.376-201ENST00000365638 108 ntBASIC0.23□□□□□ -2.37
SSX2Q16385 SNORD115-47-201ENST00000391226 86 ntBASIC0.23□□□□□ -2.37
SSX2Q16385 SNORA75.4-201ENST00000391278 119 ntBASIC0.23□□□□□ -2.37
SSX2Q16385 U8.17-201ENST00000391292 132 ntBASIC0.23□□□□□ -2.37
SSX2Q16385 AC060780.3-201ENST00000589464 80 ntBASIC0.23□□□□□ -2.37
SSX2Q16385 Pinc.1-201ENST00000616452 154 ntBASIC0.23□□□□□ -2.37
SSX2Q16385 AC087588.2-201ENST00000617667 426 ntBASIC0.23□□□□□ -2.37
SSX2Q16385 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
SSX2Q16385 Y_RNA.36-201ENST00000362602 112 ntBASIC0.22□□□□□ -2.37
SSX2Q16385 Y_RNA.88-201ENST00000363029 99 ntBASIC0.22□□□□□ -2.37
SSX2Q16385 SNORD45.3-201ENST00000363836 72 ntBASIC0.22□□□□□ -2.37
SSX2Q16385 RNU4-24P-201ENST00000364565 139 ntBASIC0.22□□□□□ -2.37
SSX2Q16385 RNU6-442P-201ENST00000383968 104 ntBASIC0.22□□□□□ -2.37
SSX2Q16385 Y_RNA.592-201ENST00000410274 109 ntBASIC0.22□□□□□ -2.37
SSX2Q16385 RNU6-855P-201ENST00000410395 104 ntBASIC0.22□□□□□ -2.37
SSX2Q16385 AC092989.1-201ENST00000481235 277 ntBASIC0.22□□□□□ -2.37
SSX2Q16385 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.22□□□□□ -2.37
SSX2Q16385 RNU6-120P-201ENST00000516077 103 ntBASIC0.22□□□□□ -2.37
SSX2Q16385 RNU6-1213P-201ENST00000517075 94 ntBASIC0.22□□□□□ -2.37
SSX2Q16385 RNU7-181P-201ENST00000517234 74 ntBASIC0.22□□□□□ -2.37
SSX2Q16385 MIR4771-2-201ENST00000577758 74 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms