Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.15□□□□□ -2.23
CKAP4Q07065 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.15□□□□□ -2.23
CKAP4Q07065 AC245060.5-201ENST00000610778 3293 ntBASIC1.15□□□□□ -2.23
CKAP4Q07065 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CKAP4Q07065 Y_RNA.44-201ENST00000362676 108 ntBASIC1.14□□□□□ -2.23
CKAP4Q07065 RNU6-1272P-201ENST00000362776 107 ntBASIC1.14□□□□□ -2.23
CKAP4Q07065 SNORA4.2-201ENST00000365313 147 ntBASIC1.14□□□□□ -2.23
CKAP4Q07065 Y_RNA.352-201ENST00000365439 102 ntBASIC1.14□□□□□ -2.23
CKAP4Q07065 SNORA22-201ENST00000383907 134 ntBASIC1.14□□□□□ -2.23
CKAP4Q07065 SNORA72-201ENST00000384339 132 ntBASIC1.14□□□□□ -2.23
CKAP4Q07065 SNORA22C-201ENST00000384614 134 ntBASIC1.14□□□□□ -2.23
CKAP4Q07065 SNORA12.1-201ENST00000390873 148 ntBASIC1.14□□□□□ -2.23
CKAP4Q07065 RNU6-360P-201ENST00000390944 104 ntBASIC1.14□□□□□ -2.23
CKAP4Q07065 SNORD58.1-201ENST00000391313 66 ntBASIC1.14□□□□□ -2.23
CKAP4Q07065 AC245047.3-201ENST00000429428 127 ntBASIC1.14□□□□□ -2.23
CKAP4Q07065 HSPE1P9-201ENST00000440046 311 ntBASIC1.14□□□□□ -2.23
CKAP4Q07065 RNU7-116P-201ENST00000516940 62 ntBASIC1.14□□□□□ -2.23
CKAP4Q07065 DNAJC19P9-201ENST00000555084 351 ntBASIC1.14□□□□□ -2.23
CKAP4Q07065 MIR4303-201ENST00000581299 66 ntBASIC1.14□□□□□ -2.23
CKAP4Q07065 MIR4282-201ENST00000583613 67 ntBASIC1.14□□□□□ -2.23
CKAP4Q07065 AC068647.2-201ENST00000637380 353 ntBASIC1.14□□□□□ -2.23
CKAP4Q07065 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CKAP4Q07065 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.13□□□□□ -2.23
CKAP4Q07065 Y_RNA.82-201ENST00000363000 102 ntBASIC1.13□□□□□ -2.23
CKAP4Q07065 Y_RNA.92-201ENST00000363043 102 ntBASIC1.13□□□□□ -2.23
CKAP4Q07065 RNU6-1048P-201ENST00000364054 107 ntBASIC1.13□□□□□ -2.23
CKAP4Q07065 Y_RNA.235-201ENST00000364412 102 ntBASIC1.13□□□□□ -2.23
CKAP4Q07065 U8.7-201ENST00000364940 136 ntBASIC1.13□□□□□ -2.23
CKAP4Q07065 Y_RNA.306-201ENST00000365015 102 ntBASIC1.13□□□□□ -2.23
CKAP4Q07065 Y_RNA.312-201ENST00000365089 102 ntBASIC1.13□□□□□ -2.23
CKAP4Q07065 Y_RNA.322-201ENST00000365151 102 ntBASIC1.13□□□□□ -2.23
CKAP4Q07065 RNU6-662P-201ENST00000384253 104 ntBASIC1.13□□□□□ -2.23
CKAP4Q07065 RNU6-950P-201ENST00000384651 107 ntBASIC1.13□□□□□ -2.23
CKAP4Q07065 RNU6-136P-201ENST00000384663 107 ntBASIC1.13□□□□□ -2.23
CKAP4Q07065 RNU6-763P-201ENST00000390865 106 ntBASIC1.13□□□□□ -2.23
CKAP4Q07065 RNU6-440P-201ENST00000390882 105 ntBASIC1.13□□□□□ -2.23
CKAP4Q07065 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.13□□□□□ -2.23
CKAP4Q07065 SNORD2.1-201ENST00000458762 69 ntBASIC1.13□□□□□ -2.23
CKAP4Q07065 Y_RNA.650-201ENST00000459002 102 ntBASIC1.13□□□□□ -2.23
CKAP4Q07065 snoU13.27-201ENST00000459278 104 ntBASIC1.13□□□□□ -2.23
CKAP4Q07065 RNU7-141P-201ENST00000459304 62 ntBASIC1.13□□□□□ -2.23
CKAP4Q07065 RPL39P38-201ENST00000467018 153 ntBASIC1.13□□□□□ -2.23
CKAP4Q07065 Y_RNA.777-201ENST00000516982 102 ntBASIC1.13□□□□□ -2.23
CKAP4Q07065 AP002004.2-201ENST00000531656 154 ntBASIC1.13□□□□□ -2.23
CKAP4Q07065 AC024405.2-202ENST00000532731 184 ntBASIC1.13□□□□□ -2.23
CKAP4Q07065 AC011604.1-201ENST00000545978 196 ntBASIC1.13□□□□□ -2.23
CKAP4Q07065 AC127455.1-201ENST00000565496 145 ntBASIC1.13□□□□□ -2.23
CKAP4Q07065 MIR4421-201ENST00000578133 69 ntBASIC1.13□□□□□ -2.23
CKAP4Q07065 Y_RNA.771-201ENST00000598668 102 ntBASIC1.13□□□□□ -2.23
CKAP4Q07065 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.13□□□□□ -2.23
CKAP4Q07065 MIR548AY-201ENST00000617669 107 ntBASIC1.13□□□□□ -2.23
CKAP4Q07065 Y_RNA.789-201ENST00000622480 102 ntBASIC1.13□□□□□ -2.23
CKAP4Q07065 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CKAP4Q07065 Y_RNA.20-201ENST00000362479 113 ntBASIC1.12□□□□□ -2.23
CKAP4Q07065 SNORA1B-201ENST00000362535 133 ntBASIC1.12□□□□□ -2.23
CKAP4Q07065 RNU6-899P-201ENST00000363947 107 ntBASIC1.12□□□□□ -2.23
CKAP4Q07065 RNU6-740P-201ENST00000364734 105 ntBASIC1.12□□□□□ -2.23
CKAP4Q07065 RNA5SP126-201ENST00000365092 109 ntBASIC1.12□□□□□ -2.23
CKAP4Q07065 Y_RNA.350-201ENST00000365409 98 ntBASIC1.12□□□□□ -2.23
CKAP4Q07065 Y_RNA.416-201ENST00000384014 113 ntBASIC1.12□□□□□ -2.23
CKAP4Q07065 RNU6-1289P-201ENST00000384431 106 ntBASIC1.12□□□□□ -2.23
CKAP4Q07065 RNU6-939P-201ENST00000384634 107 ntBASIC1.12□□□□□ -2.23
CKAP4Q07065 AL603910.2-201ENST00000407268 136 ntBASIC1.12□□□□□ -2.23
CKAP4Q07065 MIR548H3-201ENST00000408771 118 ntBASIC1.12□□□□□ -2.23
CKAP4Q07065 RNU2-7P-201ENST00000410794 178 ntBASIC1.12□□□□□ -2.23
CKAP4Q07065 MRPL35P3-201ENST00000421557 364 ntBASIC1.12□□□□□ -2.23
CKAP4Q07065 U8.19-201ENST00000459095 133 ntBASIC1.12□□□□□ -2.23
CKAP4Q07065 Y_RNA.680-201ENST00000516441 93 ntBASIC1.12□□□□□ -2.23
CKAP4Q07065 RNU6-1291P-201ENST00000516591 104 ntBASIC1.12□□□□□ -2.23
CKAP4Q07065 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.12□□□□□ -2.23
CKAP4Q07065 MIR4295-201ENST00000585286 85 ntBASIC1.12□□□□□ -2.23
CKAP4Q07065 POLR3GP1-201ENST00000594073 261 ntBASIC1.12□□□□□ -2.23
CKAP4Q07065 AL008718.3-201ENST00000610217 321 ntBASIC1.12□□□□□ -2.23
CKAP4Q07065 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.12□□□□□ -2.23
CKAP4Q07065 AC013791.1-201ENST00000616619 62 ntBASIC1.12□□□□□ -2.23
CKAP4Q07065 snoU18.1-201ENST00000629629 71 ntBASIC1.12□□□□□ -2.23
CKAP4Q07065 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.12□□□□□ -2.23
CKAP4Q07065 AC068700.1-201ENST00000565862 3754 ntBASIC1.11□□□□□ -2.23
CKAP4Q07065 Y_RNA.117-201ENST00000363294 101 ntBASIC1.11□□□□□ -2.23
CKAP4Q07065 RNU6-674P-201ENST00000363831 107 ntBASIC1.11□□□□□ -2.23
CKAP4Q07065 Y_RNA.267-201ENST00000364679 109 ntBASIC1.11□□□□□ -2.23
CKAP4Q07065 RNU6-1031P-201ENST00000384773 107 ntBASIC1.11□□□□□ -2.23
CKAP4Q07065 MIR194-1-201ENST00000384892 85 ntBASIC1.11□□□□□ -2.23
CKAP4Q07065 MIR1289-2-201ENST00000408360 111 ntBASIC1.11□□□□□ -2.23
CKAP4Q07065 RN7SKP200-201ENST00000410564 320 ntBASIC1.11□□□□□ -2.23
CKAP4Q07065 RNU6-651P-201ENST00000411040 105 ntBASIC1.11□□□□□ -2.23
CKAP4Q07065 AL161935.2-201ENST00000414627 60 ntBASIC1.11□□□□□ -2.23
CKAP4Q07065 AC117454.1-201ENST00000491120 168 ntBASIC1.11□□□□□ -2.23
CKAP4Q07065 OR9P1P-201ENST00000496431 281 ntBASIC1.11□□□□□ -2.23
CKAP4Q07065 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.11□□□□□ -2.23
CKAP4Q07065 RNU7-28P-201ENST00000516759 62 ntBASIC1.11□□□□□ -2.23
CKAP4Q07065 AC019288.1-201ENST00000557918 224 ntBASIC1.11□□□□□ -2.23
CKAP4Q07065 MIR4643-201ENST00000577473 78 ntBASIC1.11□□□□□ -2.23
CKAP4Q07065 MIR5692C2-201ENST00000577959 77 ntBASIC1.11□□□□□ -2.23
CKAP4Q07065 AL162424.1-201ENST00000602325 221 ntBASIC1.11□□□□□ -2.23
CKAP4Q07065 AL929325.1-201ENST00000603096 117 ntBASIC1.11□□□□□ -2.23
CKAP4Q07065 AL121890.5-201ENST00000620848 304 ntBASIC1.11□□□□□ -2.23
CKAP4Q07065 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CKAP4Q07065 Y_RNA.122-201ENST00000363331 96 ntBASIC1.1□□□□□ -2.23
CKAP4Q07065 Y_RNA.307-201ENST00000365022 117 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms