Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
CSTF1Q05048 RNU11-5P-201ENST00000391216 129 ntBASIC1.01□□□□□ -2.25
CSTF1Q05048 U8.16-201ENST00000391279 133 ntBASIC1.01□□□□□ -2.25
CSTF1Q05048 RNU4-30P-201ENST00000410245 143 ntBASIC1.01□□□□□ -2.25
CSTF1Q05048 MTCO3P19-201ENST00000415864 321 ntBASIC1.01□□□□□ -2.25
CSTF1Q05048 AC113618.1-201ENST00000416747 285 ntBASIC1.01□□□□□ -2.25
CSTF1Q05048 UBE2V1P7-201ENST00000446395 340 ntBASIC1.01□□□□□ -2.25
CSTF1Q05048 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.01□□□□□ -2.25
CSTF1Q05048 SNORA31.2-201ENST00000516019 134 ntBASIC1.01□□□□□ -2.25
CSTF1Q05048 RNU6-911P-201ENST00000516523 104 ntBASIC1.01□□□□□ -2.25
CSTF1Q05048 SNORA70.22-201ENST00000517160 124 ntBASIC1.01□□□□□ -2.25
CSTF1Q05048 CYCSP23-201ENST00000519781 313 ntBASIC1.01□□□□□ -2.25
CSTF1Q05048 AC144568.1-201ENST00000520139 137 ntBASIC1.01□□□□□ -2.25
CSTF1Q05048 AC040926.1-201ENST00000530195 238 ntBASIC1.01□□□□□ -2.25
CSTF1Q05048 MIR3145-201ENST00000580727 82 ntBASIC1.01□□□□□ -2.25
CSTF1Q05048 MIR4423-201ENST00000580922 80 ntBASIC1.01□□□□□ -2.25
CSTF1Q05048 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.01□□□□□ -2.25
CSTF1Q05048 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.01□□□□□ -2.25
CSTF1Q05048 MIR6857-201ENST00000613267 93 ntBASIC1.01□□□□□ -2.25
CSTF1Q05048 Y_RNA.28-201ENST00000362554 111 ntBASIC1□□□□□ -2.25
CSTF1Q05048 Y_RNA.143-201ENST00000363520 106 ntBASIC1□□□□□ -2.25
CSTF1Q05048 Y_RNA.153-201ENST00000363615 91 ntBASIC1□□□□□ -2.25
CSTF1Q05048 Y_RNA.243-201ENST00000364481 109 ntBASIC1□□□□□ -2.25
CSTF1Q05048 SNORA70.7-201ENST00000384159 133 ntBASIC1□□□□□ -2.25
CSTF1Q05048 RNU6-910P-201ENST00000390844 107 ntBASIC1□□□□□ -2.25
CSTF1Q05048 RNU6-823P-201ENST00000391042 103 ntBASIC1□□□□□ -2.25
CSTF1Q05048 SNORD78.2-201ENST00000391076 69 ntBASIC1□□□□□ -2.25
CSTF1Q05048 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1□□□□□ -2.25
CSTF1Q05048 FCF1P4-201ENST00000448326 183 ntBASIC1□□□□□ -2.25
CSTF1Q05048 U8.20-201ENST00000459445 131 ntBASIC1□□□□□ -2.25
CSTF1Q05048 AC048334.1-201ENST00000477975 159 ntBASIC1□□□□□ -2.25
CSTF1Q05048 AC098869.1-201ENST00000481627 292 ntBASIC1□□□□□ -2.25
CSTF1Q05048 AC074133.1-201ENST00000515696 183 ntBASIC1□□□□□ -2.25
CSTF1Q05048 RNU6-1170P-201ENST00000515974 106 ntBASIC1□□□□□ -2.25
CSTF1Q05048 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1□□□□□ -2.25
CSTF1Q05048 MIR4680-201ENST00000580906 66 ntBASIC1□□□□□ -2.25
CSTF1Q05048 AC044792.1-201ENST00000593294 196 ntBASIC1□□□□□ -2.25
CSTF1Q05048 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1□□□□□ -2.25
CSTF1Q05048 AC134503.1-201ENST00000633048 54 ntBASIC1□□□□□ -2.25
CSTF1Q05048 SNORA1B-201ENST00000362535 133 ntBASIC0.99□□□□□ -2.25
CSTF1Q05048 SNORA27.1-201ENST00000362604 124 ntBASIC0.99□□□□□ -2.25
CSTF1Q05048 Y_RNA.39-201ENST00000362620 98 ntBASIC0.99□□□□□ -2.25
CSTF1Q05048 RNU4-38P-201ENST00000364472 129 ntBASIC0.99□□□□□ -2.25
CSTF1Q05048 Y_RNA.446-201ENST00000384178 104 ntBASIC0.99□□□□□ -2.25
CSTF1Q05048 Y_RNA.512-201ENST00000384518 102 ntBASIC0.99□□□□□ -2.25
CSTF1Q05048 MIR215-201ENST00000384858 110 ntBASIC0.99□□□□□ -2.25
CSTF1Q05048 MIR532-201ENST00000385025 91 ntBASIC0.99□□□□□ -2.25
CSTF1Q05048 MIR628-201ENST00000385229 95 ntBASIC0.99□□□□□ -2.25
CSTF1Q05048 AL451046.2-201ENST00000403074 277 ntBASIC0.99□□□□□ -2.25
CSTF1Q05048 MIR1302-11-201ENST00000408051 138 ntBASIC0.99□□□□□ -2.25
CSTF1Q05048 MIR1302-9-201ENST00000408365 138 ntBASIC0.99□□□□□ -2.25
CSTF1Q05048 MIR1302-10-201ENST00000408734 138 ntBASIC0.99□□□□□ -2.25
CSTF1Q05048 AC104332.1-201ENST00000440471 797 ntBASIC0.99□□□□□ -2.25
CSTF1Q05048 RPS29P28-201ENST00000446439 141 ntBASIC0.99□□□□□ -2.25
CSTF1Q05048 SNORA25.10-201ENST00000515926 124 ntBASIC0.99□□□□□ -2.25
CSTF1Q05048 RNU6-1278P-201ENST00000516130 107 ntBASIC0.99□□□□□ -2.25
CSTF1Q05048 RNU6-436P-201ENST00000516171 114 ntBASIC0.99□□□□□ -2.25
CSTF1Q05048 SNORA40.14-201ENST00000516543 86 ntBASIC0.99□□□□□ -2.25
CSTF1Q05048 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.99□□□□□ -2.25
CSTF1Q05048 MIR1273G-201ENST00000577677 100 ntBASIC0.99□□□□□ -2.25
CSTF1Q05048 AC091178.2-201ENST00000584401 117 ntBASIC0.99□□□□□ -2.25
CSTF1Q05048 AL513534.2-201ENST00000603836 250 ntBASIC0.99□□□□□ -2.25
CSTF1Q05048 MIR1302-2-201ENST00000607096 138 ntBASIC0.99□□□□□ -2.25
CSTF1Q05048 GHRLOS.1-201ENST00000610995 70 ntBASIC0.99□□□□□ -2.25
CSTF1Q05048 AC010205.1-201ENST00000616668 449 ntBASIC0.99□□□□□ -2.25
CSTF1Q05048 AC027335.2-201ENST00000624030 375 ntBASIC0.99□□□□□ -2.25
CSTF1Q05048 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
CSTF1Q05048 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CSTF1Q05048 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
CSTF1Q05048 Y_RNA.128-201ENST00000363391 112 ntBASIC0.98□□□□□ -2.25
CSTF1Q05048 RNU6-1175P-201ENST00000365200 107 ntBASIC0.98□□□□□ -2.25
CSTF1Q05048 Y_RNA.471-201ENST00000384312 102 ntBASIC0.98□□□□□ -2.25
CSTF1Q05048 AL031003.1-201ENST00000404229 172 ntBASIC0.98□□□□□ -2.25
CSTF1Q05048 AL590004.1-201ENST00000405321 300 ntBASIC0.98□□□□□ -2.25
CSTF1Q05048 Y_RNA.621-201ENST00000411065 96 ntBASIC0.98□□□□□ -2.25
CSTF1Q05048 RPL21P38-201ENST00000418090 167 ntBASIC0.98□□□□□ -2.25
CSTF1Q05048 ELOCP20-201ENST00000422460 345 ntBASIC0.98□□□□□ -2.25
CSTF1Q05048 MTND5P22-201ENST00000458380 195 ntBASIC0.98□□□□□ -2.25
CSTF1Q05048 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.98□□□□□ -2.25
CSTF1Q05048 RNU6-322P-201ENST00000516010 103 ntBASIC0.98□□□□□ -2.25
CSTF1Q05048 MIR2355-201ENST00000517199 87 ntBASIC0.98□□□□□ -2.25
CSTF1Q05048 AP003072.1-201ENST00000531740 145 ntBASIC0.98□□□□□ -2.25
CSTF1Q05048 AL356055.1-201ENST00000602528 446 ntBASIC0.98□□□□□ -2.25
CSTF1Q05048 AC022441.3-201ENST00000605737 136 ntBASIC0.98□□□□□ -2.25
CSTF1Q05048 AC127459.3-201ENST00000624328 466 ntBASIC0.98□□□□□ -2.25
CSTF1Q05048 Y_RNA.214-201ENST00000364201 112 ntBASIC0.97□□□□□ -2.25
CSTF1Q05048 Y_RNA.431-201ENST00000384086 102 ntBASIC0.97□□□□□ -2.25
CSTF1Q05048 RNU6-424P-201ENST00000384367 105 ntBASIC0.97□□□□□ -2.25
CSTF1Q05048 RNU2-54P-201ENST00000410299 190 ntBASIC0.97□□□□□ -2.25
CSTF1Q05048 RNA5SP511-201ENST00000410487 115 ntBASIC0.97□□□□□ -2.25
CSTF1Q05048 HSPE1P25-201ENST00000455484 251 ntBASIC0.97□□□□□ -2.25
CSTF1Q05048 UBL5P1-201ENST00000507979 193 ntBASIC0.97□□□□□ -2.25
CSTF1Q05048 RNU6-155P-201ENST00000516347 100 ntBASIC0.97□□□□□ -2.25
CSTF1Q05048 RNU6-1337P-201ENST00000516525 95 ntBASIC0.97□□□□□ -2.25
CSTF1Q05048 Y_RNA.715-201ENST00000517082 110 ntBASIC0.97□□□□□ -2.25
CSTF1Q05048 RNU6-897P-201ENST00000517135 105 ntBASIC0.97□□□□□ -2.25
CSTF1Q05048 MIR4698-201ENST00000577795 80 ntBASIC0.97□□□□□ -2.25
CSTF1Q05048 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.97□□□□□ -2.25
CSTF1Q05048 AC113195.1-201ENST00000579952 141 ntBASIC0.97□□□□□ -2.25
CSTF1Q05048 MIR4300-201ENST00000581016 96 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms