Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 MIR568-201ENST00000385036 95 ntBASIC1.21□□□□□ -2.22
SRPXP78539 MIR522-201ENST00000385071 87 ntBASIC1.21□□□□□ -2.22
SRPXP78539 RNU6-1248P-201ENST00000391096 64 ntBASIC1.21□□□□□ -2.22
SRPXP78539 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.21□□□□□ -2.22
SRPXP78539 AC027119.1-201ENST00000440877 241 ntBASIC1.21□□□□□ -2.22
SRPXP78539 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.21□□□□□ -2.22
SRPXP78539 AC079140.2-201ENST00000506193 142 ntBASIC1.21□□□□□ -2.22
SRPXP78539 AC114811.1-201ENST00000507207 168 ntBASIC1.21□□□□□ -2.22
SRPXP78539 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.21□□□□□ -2.22
SRPXP78539 AL161670.1-201ENST00000554348 137 ntBASIC1.21□□□□□ -2.22
SRPXP78539 AL160236.1-201ENST00000556317 195 ntBASIC1.21□□□□□ -2.22
SRPXP78539 MIR3937-201ENST00000580135 106 ntBASIC1.21□□□□□ -2.22
SRPXP78539 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.21□□□□□ -2.22
SRPXP78539 AC120024.3-201ENST00000603167 156 ntBASIC1.21□□□□□ -2.22
SRPXP78539 AC037487.3-201ENST00000606668 112 ntBASIC1.21□□□□□ -2.22
SRPXP78539 AL008718.3-201ENST00000610217 321 ntBASIC1.21□□□□□ -2.22
SRPXP78539 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.21□□□□□ -2.22
SRPXP78539 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.2□□□□□ -2.22
SRPXP78539 Y_RNA.117-201ENST00000363294 101 ntBASIC1.2□□□□□ -2.22
SRPXP78539 Y_RNA.133-201ENST00000363428 110 ntBASIC1.2□□□□□ -2.22
SRPXP78539 Y_RNA.217-201ENST00000364214 105 ntBASIC1.2□□□□□ -2.22
SRPXP78539 U8.5-201ENST00000364528 136 ntBASIC1.2□□□□□ -2.22
SRPXP78539 RNU6-163P-201ENST00000384396 106 ntBASIC1.2□□□□□ -2.22
SRPXP78539 RNU1-78P-201ENST00000391248 165 ntBASIC1.2□□□□□ -2.22
SRPXP78539 RNU6-651P-201ENST00000411040 105 ntBASIC1.2□□□□□ -2.22
SRPXP78539 SNRPGP10-201ENST00000432323 225 ntBASIC1.2□□□□□ -2.22
SRPXP78539 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.2□□□□□ -2.22
SRPXP78539 Y_RNA.641-201ENST00000459414 105 ntBASIC1.2□□□□□ -2.22
SRPXP78539 UBL5P3-201ENST00000475112 231 ntBASIC1.2□□□□□ -2.22
SRPXP78539 RN7SL429P-201ENST00000479090 223 ntBASIC1.2□□□□□ -2.22
SRPXP78539 RN7SL489P-201ENST00000486185 223 ntBASIC1.2□□□□□ -2.22
SRPXP78539 RN7SL327P-201ENST00000488659 223 ntBASIC1.2□□□□□ -2.22
SRPXP78539 HMGN1P7-201ENST00000491722 313 ntBASIC1.2□□□□□ -2.22
SRPXP78539 RNU6-917P-201ENST00000516294 104 ntBASIC1.2□□□□□ -2.22
SRPXP78539 RNU6-1045P-201ENST00000516321 107 ntBASIC1.2□□□□□ -2.22
SRPXP78539 SNORA27.4-201ENST00000516650 95 ntBASIC1.2□□□□□ -2.22
SRPXP78539 RN7SL853P-201ENST00000617250 223 ntBASIC1.2□□□□□ -2.22
SRPXP78539 snoU18.1-201ENST00000629629 71 ntBASIC1.2□□□□□ -2.22
SRPXP78539 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.2□□□□□ -2.22
SRPXP78539 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.2□□□□□ -2.22
SRPXP78539 AL161722.3-201ENST00000605789 2983 ntBASIC1.19□□□□□ -2.22
SRPXP78539 AL391987.6-201ENST00000305671 199 ntBASIC1.19□□□□□ -2.22
SRPXP78539 Y_RNA.149-201ENST00000363558 117 ntBASIC1.19□□□□□ -2.22
SRPXP78539 RNU6-1209P-201ENST00000363655 107 ntBASIC1.19□□□□□ -2.22
SRPXP78539 RNU6-899P-201ENST00000363947 107 ntBASIC1.19□□□□□ -2.22
SRPXP78539 Y_RNA.796-201ENST00000364268 102 ntBASIC1.19□□□□□ -2.22
SRPXP78539 Y_RNA.799-201ENST00000364992 102 ntBASIC1.19□□□□□ -2.22
SRPXP78539 MIR1302-6-201ENST00000408466 90 ntBASIC1.19□□□□□ -2.22
SRPXP78539 RNU6-437P-201ENST00000459408 95 ntBASIC1.19□□□□□ -2.22
SRPXP78539 RNA5SP445-201ENST00000515889 115 ntBASIC1.19□□□□□ -2.22
SRPXP78539 RNU6-922P-201ENST00000516753 99 ntBASIC1.19□□□□□ -2.22
SRPXP78539 SNORA31.24-201ENST00000517232 57 ntBASIC1.19□□□□□ -2.22
SRPXP78539 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SRPXP78539 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.19□□□□□ -2.22
SRPXP78539 MIR4762-201ENST00000585261 75 ntBASIC1.19□□□□□ -2.22
SRPXP78539 AP001485.1-201ENST00000604799 199 ntBASIC1.19□□□□□ -2.22
SRPXP78539 RNU6-199P-201ENST00000362954 107 ntBASIC1.18□□□□□ -2.22
SRPXP78539 RNU6-1289P-201ENST00000384431 106 ntBASIC1.18□□□□□ -2.22
SRPXP78539 MIR526A1-201ENST00000384897 85 ntBASIC1.18□□□□□ -2.22
SRPXP78539 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.18□□□□□ -2.22
SRPXP78539 MIR758-201ENST00000390227 88 ntBASIC1.18□□□□□ -2.22
SRPXP78539 RNU6-383P-201ENST00000410864 94 ntBASIC1.18□□□□□ -2.22
SRPXP78539 NDUFA4P2-201ENST00000489989 244 ntBASIC1.18□□□□□ -2.22
SRPXP78539 CYCTP-201ENST00000504253 315 ntBASIC1.18□□□□□ -2.22
SRPXP78539 SNORD53B-201ENST00000577887 78 ntBASIC1.18□□□□□ -2.22
SRPXP78539 MIR4422-201ENST00000581938 83 ntBASIC1.18□□□□□ -2.22
SRPXP78539 AL078604.3-201ENST00000615580 211 ntBASIC1.18□□□□□ -2.22
SRPXP78539 AC013791.1-201ENST00000616619 62 ntBASIC1.18□□□□□ -2.22
SRPXP78539 RNU6-1205P-201ENST00000363625 106 ntBASIC1.17□□□□□ -2.22
SRPXP78539 RNU4-10P-201ENST00000364383 140 ntBASIC1.17□□□□□ -2.22
SRPXP78539 Y_RNA.275-201ENST00000364726 110 ntBASIC1.17□□□□□ -2.22
SRPXP78539 RNU6-740P-201ENST00000364734 105 ntBASIC1.17□□□□□ -2.22
SRPXP78539 SNORD50B-201ENST00000364995 70 ntBASIC1.17□□□□□ -2.22
SRPXP78539 MIR150-201ENST00000385048 84 ntBASIC1.17□□□□□ -2.22
SRPXP78539 U8.13-201ENST00000390842 128 ntBASIC1.17□□□□□ -2.22
SRPXP78539 SNORA67.6-201ENST00000391093 99 ntBASIC1.17□□□□□ -2.22
SRPXP78539 RNU6-131P-201ENST00000391144 107 ntBASIC1.17□□□□□ -2.22
SRPXP78539 AL627390.1-201ENST00000396055 340 ntBASIC1.17□□□□□ -2.22
SRPXP78539 MIR891A-201ENST00000401237 79 ntBASIC1.17□□□□□ -2.22
SRPXP78539 RNU2-38P-201ENST00000410856 79 ntBASIC1.17□□□□□ -2.22
SRPXP78539 RPL30P13-201ENST00000418873 348 ntBASIC1.17□□□□□ -2.22
SRPXP78539 MTCYBP9-201ENST00000431021 303 ntBASIC1.17□□□□□ -2.22
SRPXP78539 MTND4LP30-201ENST00000454092 297 ntBASIC1.17□□□□□ -2.22
SRPXP78539 snoU13.15-201ENST00000459407 104 ntBASIC1.17□□□□□ -2.22
SRPXP78539 MTCO2P24-201ENST00000515611 426 ntBASIC1.17□□□□□ -2.22
SRPXP78539 SNORA25.15-201ENST00000516487 89 ntBASIC1.17□□□□□ -2.22
SRPXP78539 SNORD45.4-201ENST00000516629 73 ntBASIC1.17□□□□□ -2.22
SRPXP78539 RNU6-902P-201ENST00000517212 91 ntBASIC1.17□□□□□ -2.22
SRPXP78539 RPL23AP91-201ENST00000569211 455 ntBASIC1.17□□□□□ -2.22
SRPXP78539 U2.14-201ENST00000615943 113 ntBASIC1.17□□□□□ -2.22
SRPXP78539 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SRPXP78539 UBE2WP1-201ENST00000362030 340 ntBASIC1.16□□□□□ -2.22
SRPXP78539 Y_RNA.44-201ENST00000362676 108 ntBASIC1.16□□□□□ -2.22
SRPXP78539 U8.1-201ENST00000362843 134 ntBASIC1.16□□□□□ -2.22
SRPXP78539 RNU6-969P-201ENST00000383900 105 ntBASIC1.16□□□□□ -2.22
SRPXP78539 SNX2P2-201ENST00000424553 323 ntBASIC1.16□□□□□ -2.22
SRPXP78539 AL354695.1-201ENST00000427935 228 ntBASIC1.16□□□□□ -2.22
SRPXP78539 AC015922.2-201ENST00000435593 184 ntBASIC1.16□□□□□ -2.22
SRPXP78539 SNRPGP13-201ENST00000442212 177 ntBASIC1.16□□□□□ -2.22
SRPXP78539 AC245517.4-201ENST00000448601 281 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 254.3 ms