Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC087683.2-201ENST00000611384 326 ntBASIC-3.08□□□□□ -2.9
RPL39P62891 AL445264.1-201ENST00000621719 171 ntBASIC-3.08□□□□□ -2.9
RPL39P62891 RNU6-819P-201ENST00000364116 107 ntBASIC-3.09□□□□□ -2.9
RPL39P62891 RNU6-343P-201ENST00000364709 104 ntBASIC-3.09□□□□□ -2.9
RPL39P62891 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-3.09□□□□□ -2.9
RPL39P62891 HMGN2P32-201ENST00000444648 269 ntBASIC-3.09□□□□□ -2.9
RPL39P62891 AC119751.4-201ENST00000507498 357 ntBASIC-3.09□□□□□ -2.9
RPL39P62891 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-3.09□□□□□ -2.9
RPL39P62891 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-3.09□□□□□ -2.9
RPL39P62891 RNU6-228P-201ENST00000362700 106 ntBASIC-3.1□□□□□ -2.91
RPL39P62891 RNU6-1233P-201ENST00000362922 102 ntBASIC-3.1□□□□□ -2.91
RPL39P62891 Y_RNA.456-201ENST00000384232 111 ntBASIC-3.1□□□□□ -2.91
RPL39P62891 Y_RNA.475-201ENST00000384345 101 ntBASIC-3.1□□□□□ -2.91
RPL39P62891 MTCO3P8-201ENST00000453691 755 ntBASIC-3.1□□□□□ -2.91
RPL39P62891 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-3.1□□□□□ -2.91
RPL39P62891 PART1_1.1-201ENST00000611761 217 ntBASIC-3.1□□□□□ -2.91
RPL39P62891 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-3.1□□□□□ -2.91
RPL39P62891 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-3.1□□□□□ -2.91
RPL39P62891 SNORA63.5-201ENST00000363548 123 ntBASIC-3.11□□□□□ -2.91
RPL39P62891 RNU1-141P-201ENST00000364623 158 ntBASIC-3.11□□□□□ -2.91
RPL39P62891 RNU6-1029P-201ENST00000384109 107 ntBASIC-3.11□□□□□ -2.91
RPL39P62891 RNU6-1179P-201ENST00000384667 107 ntBASIC-3.11□□□□□ -2.91
RPL39P62891 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-3.11□□□□□ -2.91
RPL39P62891 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-3.11□□□□□ -2.91
RPL39P62891 RNU6-677P-201ENST00000516914 101 ntBASIC-3.11□□□□□ -2.91
RPL39P62891 SNORA25.17-201ENST00000517184 124 ntBASIC-3.11□□□□□ -2.91
RPL39P62891 AC069503.3-201ENST00000618674 145 ntBASIC-3.11□□□□□ -2.91
RPL39P62891 Y_RNA.244-201ENST00000364484 109 ntBASIC-3.12□□□□□ -2.91
RPL39P62891 RNU6-1127P-201ENST00000384580 107 ntBASIC-3.12□□□□□ -2.91
RPL39P62891 MTCO2P11-201ENST00000431069 680 ntBASIC-3.12□□□□□ -2.91
RPL39P62891 RNU2-13P-201ENST00000515909 113 ntBASIC-3.12□□□□□ -2.91
RPL39P62891 RNU6-64P-201ENST00000517119 105 ntBASIC-3.12□□□□□ -2.91
RPL39P62891 MIR664B-201ENST00000626756 61 ntBASIC-3.12□□□□□ -2.91
RPL39P62891 MIR6874-201ENST00000635894 71 ntBASIC-3.12□□□□□ -2.91
RPL39P62891 MIR1322-201ENST00000638013 71 ntBASIC-3.12□□□□□ -2.91
RPL39P62891 RNU6-386P-201ENST00000362650 107 ntBASIC-3.13□□□□□ -2.91
RPL39P62891 RNU6-839P-201ENST00000363347 108 ntBASIC-3.13□□□□□ -2.91
RPL39P62891 RNU6-312P-201ENST00000364629 107 ntBASIC-3.13□□□□□ -2.91
RPL39P62891 MIR124-2-201ENST00000385081 109 ntBASIC-3.13□□□□□ -2.91
RPL39P62891 RNU2-9P-201ENST00000410194 145 ntBASIC-3.13□□□□□ -2.91
RPL39P62891 AC244090.1-201ENST00000441884 93 ntBASIC-3.13□□□□□ -2.91
RPL39P62891 RNU2-10P-201ENST00000516375 211 ntBASIC-3.13□□□□□ -2.91
RPL39P62891 SNORD116-30-201ENST00000516468 85 ntBASIC-3.13□□□□□ -2.91
RPL39P62891 OSBPL9P5-201ENST00000542581 171 ntBASIC-3.13□□□□□ -2.91
RPL39P62891 MIR548AE1-201ENST00000583292 70 ntBASIC-3.13□□□□□ -2.91
RPL39P62891 AC005776.1-201ENST00000603164 290 ntBASIC-3.13□□□□□ -2.91
RPL39P62891 AC096586.1-201ENST00000610267 561 ntBASIC-3.13□□□□□ -2.91
RPL39P62891 AC097460.3-201ENST00000623099 442 ntBASIC-3.13□□□□□ -2.91
RPL39P62891 SNORD115-28-201ENST00000363931 81 ntBASIC-3.14□□□□□ -2.91
RPL39P62891 Y_RNA.253-201ENST00000364562 112 ntBASIC-3.14□□□□□ -2.91
RPL39P62891 SNORA49-201ENST00000386157 136 ntBASIC-3.14□□□□□ -2.91
RPL39P62891 RNU6-847P-201ENST00000411115 108 ntBASIC-3.14□□□□□ -2.91
RPL39P62891 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-3.14□□□□□ -2.91
RPL39P62891 AC008628.2-201ENST00000502605 298 ntBASIC-3.14□□□□□ -2.91
RPL39P62891 AC108019.1-201ENST00000512540 175 ntBASIC-3.14□□□□□ -2.91
RPL39P62891 MIR4491-201ENST00000581087 68 ntBASIC-3.14□□□□□ -2.91
RPL39P62891 RNU6-484P-201ENST00000384016 107 ntBASIC-3.15□□□□□ -2.91
RPL39P62891 MIR548A2-201ENST00000384956 97 ntBASIC-3.15□□□□□ -2.91
RPL39P62891 RPL39P25-201ENST00000449384 154 ntBASIC-3.15□□□□□ -2.91
RPL39P62891 AC024405.2-202ENST00000532731 184 ntBASIC-3.15□□□□□ -2.91
RPL39P62891 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-3.15□□□□□ -2.91
RPL39P62891 RNU6-164P-201ENST00000364604 103 ntBASIC-3.16□□□□□ -2.92
RPL39P62891 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC-3.16□□□□□ -2.92
RPL39P62891 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-3.16□□□□□ -2.92
RPL39P62891 RPL23AP30-201ENST00000432419 501 ntBASIC-3.16□□□□□ -2.92
RPL39P62891 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-3.16□□□□□ -2.92
RPL39P62891 YWHAEP2-201ENST00000580066 112 ntBASIC-3.16□□□□□ -2.92
RPL39P62891 MIR5692A1-201ENST00000580523 69 ntBASIC-3.16□□□□□ -2.92
RPL39P62891 SNORA72.6-201ENST00000384520 129 ntBASIC-3.17□□□□□ -2.92
RPL39P62891 RNU6-476P-201ENST00000384726 107 ntBASIC-3.17□□□□□ -2.92
RPL39P62891 RPL30P16-201ENST00000419341 429 ntBASIC-3.17□□□□□ -2.92
RPL39P62891 USP9YP30-201ENST00000430729 455 ntBASIC-3.17□□□□□ -2.92
RPL39P62891 AC093899.1-201ENST00000457984 376 ntBASIC-3.17□□□□□ -2.92
RPL39P62891 SNORD65B-201ENST00000459126 73 ntBASIC-3.17□□□□□ -2.92
RPL39P62891 RNU6-437P-201ENST00000459408 95 ntBASIC-3.17□□□□□ -2.92
RPL39P62891 SNORD115-40-201ENST00000606510 82 ntBASIC-3.17□□□□□ -2.92
RPL39P62891 RNU4-92P-201ENST00000363783 136 ntBASIC-3.18□□□□□ -2.92
RPL39P62891 RNU6-376P-201ENST00000384731 106 ntBASIC-3.18□□□□□ -2.92
RPL39P62891 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-3.18□□□□□ -2.92
RPL39P62891 Y_RNA.598-201ENST00000410480 95 ntBASIC-3.18□□□□□ -2.92
RPL39P62891 RNU7-74P-201ENST00000459104 62 ntBASIC-3.18□□□□□ -2.92
RPL39P62891 RNU6-1194P-201ENST00000516208 104 ntBASIC-3.18□□□□□ -2.92
RPL39P62891 RNU6-830P-201ENST00000516353 107 ntBASIC-3.18□□□□□ -2.92
RPL39P62891 Y_RNA.678-201ENST00000516408 96 ntBASIC-3.18□□□□□ -2.92
RPL39P62891 Y_RNA.504-201ENST00000384481 104 ntBASIC-3.19□□□□□ -2.92
RPL39P62891 RNU6-83P-201ENST00000384568 112 ntBASIC-3.19□□□□□ -2.92
RPL39P62891 RNU2-29P-201ENST00000410423 189 ntBASIC-3.19□□□□□ -2.92
RPL39P62891 RNU2-51P-201ENST00000410708 197 ntBASIC-3.19□□□□□ -2.92
RPL39P62891 Y_RNA.684-201ENST00000516510 99 ntBASIC-3.19□□□□□ -2.92
RPL39P62891 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-3.19□□□□□ -2.92
RPL39P62891 AC174048.1-201ENST00000603389 144 ntBASIC-3.19□□□□□ -2.92
RPL39P62891 AC093783.1-201ENST00000612976 329 ntBASIC-3.19□□□□□ -2.92
RPL39P62891 Y_RNA.577-201ENST00000384794 101 ntBASIC-3.2□□□□□ -2.92
RPL39P62891 MIR496-201ENST00000385226 102 ntBASIC-3.2□□□□□ -2.92
RPL39P62891 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-3.2□□□□□ -2.92
RPL39P62891 RNU6-118P-201ENST00000516552 102 ntBASIC-3.2□□□□□ -2.92
RPL39P62891 AC055872.1-201ENST00000570978 278 ntBASIC-3.2□□□□□ -2.92
RPL39P62891 AC091965.4-201ENST00000607691 587 ntBASIC-3.2□□□□□ -2.92
RPL39P62891 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-3.2□□□□□ -2.92
RPL39P62891 RNU6-1084P-201ENST00000362498 107 ntBASIC-3.21□□□□□ -2.92
Retrieved 100 of 98,524 protein–RNA pairs in 193.5 ms