Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 SNORA72-201ENST00000384339 132 ntBASIC-0.72□□□□□ -2.52
LSM6P62312 SNORD38B-201ENST00000384690 67 ntBASIC-0.72□□□□□ -2.52
LSM6P62312 MIR517A-201ENST00000385001 87 ntBASIC-0.72□□□□□ -2.52
LSM6P62312 MTND1P27-201ENST00000451117 902 ntBASIC-0.72□□□□□ -2.52
LSM6P62312 AC091959.1-201ENST00000495857 238 ntBASIC-0.72□□□□□ -2.52
LSM6P62312 RNU2-13P-201ENST00000515909 113 ntBASIC-0.72□□□□□ -2.52
LSM6P62312 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.72□□□□□ -2.52
LSM6P62312 AF246928.1-201ENST00000623768 87 ntBASIC-0.72□□□□□ -2.52
LSM6P62312 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.72□□□□□ -2.52
LSM6P62312 MIR518F-201ENST00000384973 87 ntBASIC-0.73□□□□□ -2.53
LSM6P62312 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.73□□□□□ -2.53
LSM6P62312 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.73□□□□□ -2.53
LSM6P62312 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.73□□□□□ -2.53
LSM6P62312 RNU6-232P-201ENST00000517144 64 ntBASIC-0.73□□□□□ -2.53
LSM6P62312 RNU7-181P-201ENST00000517234 74 ntBASIC-0.73□□□□□ -2.53
LSM6P62312 AC138869.1-201ENST00000568623 124 ntBASIC-0.73□□□□□ -2.53
LSM6P62312 AC005972.2-201ENST00000604690 348 ntBASIC-0.73□□□□□ -2.53
LSM6P62312 uc_338.22-201ENST00000622722 187 ntBASIC-0.73□□□□□ -2.53
LSM6P62312 AC079248.2-201ENST00000623779 326 ntBASIC-0.73□□□□□ -2.53
LSM6P62312 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.74□□□□□ -2.53
LSM6P62312 RNU6-1103P-201ENST00000384150 107 ntBASIC-0.74□□□□□ -2.53
LSM6P62312 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.74□□□□□ -2.53
LSM6P62312 RNA5SP163-201ENST00000410304 99 ntBASIC-0.74□□□□□ -2.53
LSM6P62312 MTCO2P27-201ENST00000420740 428 ntBASIC-0.74□□□□□ -2.53
LSM6P62312 EIF1P2-201ENST00000428233 350 ntBASIC-0.74□□□□□ -2.53
LSM6P62312 MTATP6P13-201ENST00000438531 667 ntBASIC-0.74□□□□□ -2.53
LSM6P62312 SUMO1P3-201ENST00000439961 304 ntBASIC-0.74□□□□□ -2.53
LSM6P62312 AC107297.1-201ENST00000459991 176 ntBASIC-0.74□□□□□ -2.53
LSM6P62312 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.74□□□□□ -2.53
LSM6P62312 AC125232.2-201ENST00000592457 143 ntBASIC-0.74□□□□□ -2.53
LSM6P62312 Z94722.1-201ENST00000604328 474 ntBASIC-0.74□□□□□ -2.53
LSM6P62312 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.74□□□□□ -2.53
LSM6P62312 MIR6740-201ENST00000618268 113 ntBASIC-0.74□□□□□ -2.53
LSM6P62312 ZNF299P-201ENST00000406845 1804 ntBASIC-0.75□□□□□ -2.53
LSM6P62312 RNU6-553P-201ENST00000364047 96 ntBASIC-0.75□□□□□ -2.53
LSM6P62312 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.75□□□□□ -2.53
LSM6P62312 MT-TF-201ENST00000387314 71 ntBASIC-0.75□□□□□ -2.53
LSM6P62312 MCFD2P1-201ENST00000417812 300 ntBASIC-0.75□□□□□ -2.53
LSM6P62312 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.75□□□□□ -2.53
LSM6P62312 RNU6-1129P-201ENST00000515964 104 ntBASIC-0.75□□□□□ -2.53
LSM6P62312 AC124303.1-201ENST00000605703 360 ntBASIC-0.75□□□□□ -2.53
LSM6P62312 AC019193.3-201ENST00000609144 554 ntBASIC-0.75□□□□□ -2.53
LSM6P62312 MIR548AZ-201ENST00000616567 95 ntBASIC-0.75□□□□□ -2.53
LSM6P62312 Y_RNA.167-201ENST00000363735 109 ntBASIC-0.76□□□□□ -2.53
LSM6P62312 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.76□□□□□ -2.53
LSM6P62312 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.76□□□□□ -2.53
LSM6P62312 HMGN2P22-201ENST00000427588 175 ntBASIC-0.76□□□□□ -2.53
LSM6P62312 SNRPGP14-201ENST00000435400 219 ntBASIC-0.76□□□□□ -2.53
LSM6P62312 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.76□□□□□ -2.53
LSM6P62312 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-0.76□□□□□ -2.53
LSM6P62312 MIR3152-201ENST00000579801 74 ntBASIC-0.76□□□□□ -2.53
LSM6P62312 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.76□□□□□ -2.53
LSM6P62312 RNU6-161P-201ENST00000363051 106 ntBASIC-0.77□□□□□ -2.53
LSM6P62312 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.77□□□□□ -2.53
LSM6P62312 RNU6-254P-201ENST00000363377 107 ntBASIC-0.77□□□□□ -2.53
LSM6P62312 RNU6-595P-201ENST00000363944 107 ntBASIC-0.77□□□□□ -2.53
LSM6P62312 SNORD115-30-201ENST00000364117 82 ntBASIC-0.77□□□□□ -2.53
LSM6P62312 RNU6-95P-201ENST00000384697 107 ntBASIC-0.77□□□□□ -2.53
LSM6P62312 MIR588-201ENST00000384900 83 ntBASIC-0.77□□□□□ -2.53
LSM6P62312 RNA5SP300-201ENST00000391197 107 ntBASIC-0.77□□□□□ -2.53
LSM6P62312 SNORA26-201ENST00000391286 122 ntBASIC-0.77□□□□□ -2.53
LSM6P62312 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.77□□□□□ -2.53
LSM6P62312 AL031667.1-201ENST00000440222 725 ntBASIC-0.77□□□□□ -2.53
LSM6P62312 RNA5SP47-201ENST00000517230 109 ntBASIC-0.77□□□□□ -2.53
LSM6P62312 RNU2-60P-201ENST00000517290 128 ntBASIC-0.77□□□□□ -2.53
LSM6P62312 MIR4273-201ENST00000582824 84 ntBASIC-0.77□□□□□ -2.53
LSM6P62312 AL391262.2-201ENST00000622466 494 ntBASIC-0.77□□□□□ -2.53
LSM6P62312 RNU6-268P-201ENST00000364174 107 ntBASIC-0.78□□□□□ -2.53
LSM6P62312 SNORA8.3-201ENST00000384679 139 ntBASIC-0.78□□□□□ -2.53
LSM6P62312 MIR215-201ENST00000384858 110 ntBASIC-0.78□□□□□ -2.53
LSM6P62312 SNORA75.4-201ENST00000391278 119 ntBASIC-0.78□□□□□ -2.53
LSM6P62312 AC090844.1-201ENST00000422019 156 ntBASIC-0.78□□□□□ -2.53
LSM6P62312 RNU6-261P-201ENST00000459506 102 ntBASIC-0.78□□□□□ -2.53
LSM6P62312 AC134878.1-201ENST00000619901 243 ntBASIC-0.78□□□□□ -2.53
LSM6P62312 SNORA72.3-201ENST00000365074 132 ntBASIC-0.79□□□□□ -2.54
LSM6P62312 RNU4-20P-201ENST00000365601 151 ntBASIC-0.79□□□□□ -2.54
LSM6P62312 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.79□□□□□ -2.54
LSM6P62312 MTND4LP11-201ENST00000422184 280 ntBASIC-0.79□□□□□ -2.54
LSM6P62312 MTCO2P19-201ENST00000427513 598 ntBASIC-0.79□□□□□ -2.54
LSM6P62312 MTCO1P5-201ENST00000433573 344 ntBASIC-0.79□□□□□ -2.54
LSM6P62312 AC236972.2-201ENST00000434979 310 ntBASIC-0.79□□□□□ -2.54
LSM6P62312 MTND1P11-201ENST00000456661 876 ntBASIC-0.79□□□□□ -2.54
LSM6P62312 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.79□□□□□ -2.54
LSM6P62312 RNU6-180P-201ENST00000516697 61 ntBASIC-0.79□□□□□ -2.54
LSM6P62312 AP001180.6-201ENST00000584918 159 ntBASIC-0.79□□□□□ -2.54
LSM6P62312 AC121247.2-201ENST00000604776 136 ntBASIC-0.79□□□□□ -2.54
LSM6P62312 JPX_2.1-201ENST00000614161 69 ntBASIC-0.79□□□□□ -2.54
LSM6P62312 RNU6-596P-201ENST00000365395 98 ntBASIC-0.8□□□□□ -2.54
LSM6P62312 SNORA24-201ENST00000384096 131 ntBASIC-0.8□□□□□ -2.54
LSM6P62312 SNORA32.3-201ENST00000384772 121 ntBASIC-0.8□□□□□ -2.54
LSM6P62312 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.8□□□□□ -2.54
LSM6P62312 snoU13.2-201ENST00000459201 104 ntBASIC-0.8□□□□□ -2.54
LSM6P62312 SNORD126-201ENST00000459475 77 ntBASIC-0.8□□□□□ -2.54
LSM6P62312 RNU6-504P-201ENST00000516568 104 ntBASIC-0.8□□□□□ -2.54
LSM6P62312 RNU2-12P-201ENST00000517216 168 ntBASIC-0.8□□□□□ -2.54
LSM6P62312 AC006600.1-201ENST00000572529 153 ntBASIC-0.8□□□□□ -2.54
LSM6P62312 MIR4639-201ENST00000584938 69 ntBASIC-0.8□□□□□ -2.54
LSM6P62312 AC006380.1-201ENST00000603598 186 ntBASIC-0.8□□□□□ -2.54
LSM6P62312 U7.6-201ENST00000610841 64 ntBASIC-0.8□□□□□ -2.54
LSM6P62312 AP000720.1-201ENST00000625091 483 ntBASIC-0.8□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms