Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.31□□□□□ -2.62
CKS1BP61024 MIR101-2-201ENST00000362195 79 ntBASIC-1.32□□□□□ -2.62
CKS1BP61024 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.32□□□□□ -2.62
CKS1BP61024 RNU6-740P-201ENST00000364734 105 ntBASIC-1.32□□□□□ -2.62
CKS1BP61024 RNU6-442P-201ENST00000383968 104 ntBASIC-1.32□□□□□ -2.62
CKS1BP61024 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.32□□□□□ -2.62
CKS1BP61024 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.32□□□□□ -2.62
CKS1BP61024 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.32□□□□□ -2.62
CKS1BP61024 RPL30P10-201ENST00000488148 337 ntBASIC-1.32□□□□□ -2.62
CKS1BP61024 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-1.32□□□□□ -2.62
CKS1BP61024 MIR5583-1-201ENST00000580941 59 ntBASIC-1.32□□□□□ -2.62
CKS1BP61024 MIR30D-201ENST00000362283 70 ntBASIC-1.33□□□□□ -2.62
CKS1BP61024 RNA5SP205-201ENST00000364653 136 ntBASIC-1.33□□□□□ -2.62
CKS1BP61024 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.33□□□□□ -2.62
CKS1BP61024 RNU6-1200P-201ENST00000384162 107 ntBASIC-1.33□□□□□ -2.62
CKS1BP61024 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.33□□□□□ -2.62
CKS1BP61024 SNORD83B-201ENST00000386745 93 ntBASIC-1.33□□□□□ -2.62
CKS1BP61024 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.33□□□□□ -2.62
CKS1BP61024 SNRPGP14-201ENST00000435400 219 ntBASIC-1.33□□□□□ -2.62
CKS1BP61024 MTATP6P14-201ENST00000455189 673 ntBASIC-1.33□□□□□ -2.62
CKS1BP61024 SCARNA17-201ENST00000516183 144 ntBASIC-1.33□□□□□ -2.62
CKS1BP61024 AC105029.1-201ENST00000520250 669 ntBASIC-1.33□□□□□ -2.62
CKS1BP61024 MIR3682-201ENST00000581338 84 ntBASIC-1.33□□□□□ -2.62
CKS1BP61024 Z84480.1-201ENST00000605131 311 ntBASIC-1.33□□□□□ -2.62
CKS1BP61024 MIR410-201ENST00000362222 80 ntBASIC-1.34□□□□□ -2.62
CKS1BP61024 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.34□□□□□ -2.62
CKS1BP61024 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.34□□□□□ -2.62
CKS1BP61024 SNORA24-201ENST00000384096 131 ntBASIC-1.34□□□□□ -2.62
CKS1BP61024 RNU6-636P-201ENST00000384598 107 ntBASIC-1.34□□□□□ -2.62
CKS1BP61024 RNU6-903P-201ENST00000391270 109 ntBASIC-1.34□□□□□ -2.62
CKS1BP61024 MTCO3P40-201ENST00000392516 676 ntBASIC-1.34□□□□□ -2.62
CKS1BP61024 SNORD93-201ENST00000408813 74 ntBASIC-1.34□□□□□ -2.62
CKS1BP61024 AC236972.2-201ENST00000434979 310 ntBASIC-1.34□□□□□ -2.62
CKS1BP61024 UQCRBP2-201ENST00000447827 297 ntBASIC-1.34□□□□□ -2.62
CKS1BP61024 AC069431.2-201ENST00000604149 1099 ntBASIC-1.34□□□□□ -2.62
CKS1BP61024 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-1.34□□□□□ -2.62
CKS1BP61024 AL162376.1-201ENST00000624117 175 ntBASIC-1.34□□□□□ -2.62
CKS1BP61024 SNORA22B-201ENST00000383876 138 ntBASIC-1.35□□□□□ -2.63
CKS1BP61024 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.35□□□□□ -2.63
CKS1BP61024 MTCO3P38-201ENST00000468910 766 ntBASIC-1.35□□□□□ -2.63
CKS1BP61024 AC134698.4-201ENST00000523451 826 ntBASIC-1.35□□□□□ -2.63
CKS1BP61024 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.35□□□□□ -2.63
CKS1BP61024 MIR6507-201ENST00000613630 70 ntBASIC-1.35□□□□□ -2.63
CKS1BP61024 AC087588.2-201ENST00000617667 426 ntBASIC-1.35□□□□□ -2.63
CKS1BP61024 AP002371.2-201ENST00000624450 503 ntBASIC-1.35□□□□□ -2.63
CKS1BP61024 RNY4P3-201ENST00000365254 95 ntBASIC-1.36□□□□□ -2.63
CKS1BP61024 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-1.36□□□□□ -2.63
CKS1BP61024 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.36□□□□□ -2.63
CKS1BP61024 RNU7-73P-201ENST00000458743 63 ntBASIC-1.36□□□□□ -2.63
CKS1BP61024 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.36□□□□□ -2.63
CKS1BP61024 RNU6-765P-201ENST00000516916 99 ntBASIC-1.36□□□□□ -2.63
CKS1BP61024 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.36□□□□□ -2.63
CKS1BP61024 AC245008.1-201ENST00000608123 476 ntBASIC-1.36□□□□□ -2.63
CKS1BP61024 AC087683.2-201ENST00000611384 326 ntBASIC-1.36□□□□□ -2.63
CKS1BP61024 Z97988.1-201ENST00000637697 135 ntBASIC-1.36□□□□□ -2.63
CKS1BP61024 Y_RNA.361-201ENST00000365515 120 ntBASIC-1.37□□□□□ -2.63
CKS1BP61024 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.37□□□□□ -2.63
CKS1BP61024 SPINT5P-201ENST00000448174 155 ntBASIC-1.37□□□□□ -2.63
CKS1BP61024 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.37□□□□□ -2.63
CKS1BP61024 AC010424.1-201ENST00000506336 297 ntBASIC-1.37□□□□□ -2.63
CKS1BP61024 AL133215.3-201ENST00000609801 448 ntBASIC-1.37□□□□□ -2.63
CKS1BP61024 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.38□□□□□ -2.63
CKS1BP61024 RNU6-517P-201ENST00000384362 110 ntBASIC-1.38□□□□□ -2.63
CKS1BP61024 RNU6-83P-201ENST00000384568 112 ntBASIC-1.38□□□□□ -2.63
CKS1BP61024 RNU6-1242P-201ENST00000391052 103 ntBASIC-1.38□□□□□ -2.63
CKS1BP61024 MTATP6P26-201ENST00000445926 662 ntBASIC-1.38□□□□□ -2.63
CKS1BP61024 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.38□□□□□ -2.63
CKS1BP61024 MIR4999-201ENST00000585029 91 ntBASIC-1.38□□□□□ -2.63
CKS1BP61024 HULC.1-201ENST00000612720 240 ntBASIC-1.38□□□□□ -2.63
CKS1BP61024 MIR6082-201ENST00000613604 109 ntBASIC-1.38□□□□□ -2.63
CKS1BP61024 AC084368.1-201ENST00000620935 65 ntBASIC-1.38□□□□□ -2.63
CKS1BP61024 RNU6-268P-201ENST00000364174 107 ntBASIC-1.39□□□□□ -2.63
CKS1BP61024 Y_RNA.243-201ENST00000364481 109 ntBASIC-1.39□□□□□ -2.63
CKS1BP61024 RNY4P34-201ENST00000364779 95 ntBASIC-1.39□□□□□ -2.63
CKS1BP61024 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.39□□□□□ -2.63
CKS1BP61024 RNU6-291P-201ENST00000384720 107 ntBASIC-1.39□□□□□ -2.63
CKS1BP61024 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.39□□□□□ -2.63
CKS1BP61024 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.39□□□□□ -2.63
CKS1BP61024 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.39□□□□□ -2.63
CKS1BP61024 RNU7-180P-201ENST00000459240 63 ntBASIC-1.39□□□□□ -2.63
CKS1BP61024 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.39□□□□□ -2.63
CKS1BP61024 RNA5SP66-201ENST00000517178 101 ntBASIC-1.39□□□□□ -2.63
CKS1BP61024 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.39□□□□□ -2.63
CKS1BP61024 POLR3GP1-201ENST00000594073 261 ntBASIC-1.39□□□□□ -2.63
CKS1BP61024 AC073869.9-201ENST00000641610 120 ntBASIC-1.39□□□□□ -2.63
CKS1BP61024 RNU5F-7P-201ENST00000363696 115 ntBASIC-1.4□□□□□ -2.63
CKS1BP61024 RNU6-726P-201ENST00000364680 107 ntBASIC-1.4□□□□□ -2.63
CKS1BP61024 Y_RNA.295-201ENST00000364918 102 ntBASIC-1.4□□□□□ -2.63
CKS1BP61024 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.4□□□□□ -2.63
CKS1BP61024 HMGN1P33-201ENST00000432945 451 ntBASIC-1.4□□□□□ -2.63
CKS1BP61024 RNU2-11P-201ENST00000459191 187 ntBASIC-1.4□□□□□ -2.63
CKS1BP61024 RNU6-189P-201ENST00000516120 101 ntBASIC-1.4□□□□□ -2.63
CKS1BP61024 AC005972.2-201ENST00000604690 348 ntBASIC-1.4□□□□□ -2.63
CKS1BP61024 SNORA1-201ENST00000384107 130 ntBASIC-1.41□□□□□ -2.64
CKS1BP61024 RNU6-281P-201ENST00000384212 103 ntBASIC-1.41□□□□□ -2.64
CKS1BP61024 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.41□□□□□ -2.64
CKS1BP61024 RPL7P42-201ENST00000481005 679 ntBASIC-1.41□□□□□ -2.64
CKS1BP61024 RNA5SP395-201ENST00000516567 118 ntBASIC-1.41□□□□□ -2.64
CKS1BP61024 MTND4P7-201ENST00000523876 130 ntBASIC-1.41□□□□□ -2.64
CKS1BP61024 AP003072.1-201ENST00000531740 145 ntBASIC-1.41□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms