Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.84□□□□□ -2.27
SRP54P61011 MIR103A2-201ENST00000362154 78 ntBASIC0.83□□□□□ -2.28
SRP54P61011 RNA5SP48-201ENST00000363969 126 ntBASIC0.83□□□□□ -2.28
SRP54P61011 RNU6-1175P-201ENST00000365200 107 ntBASIC0.83□□□□□ -2.28
SRP54P61011 Y_RNA.329-201ENST00000365209 107 ntBASIC0.83□□□□□ -2.28
SRP54P61011 RNU6-1323P-201ENST00000384025 107 ntBASIC0.83□□□□□ -2.28
SRP54P61011 Y_RNA.428-201ENST00000384078 102 ntBASIC0.83□□□□□ -2.28
SRP54P61011 SNORD116-29-201ENST00000384516 83 ntBASIC0.83□□□□□ -2.28
SRP54P61011 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
SRP54P61011 RNU6-855P-201ENST00000410395 104 ntBASIC0.83□□□□□ -2.28
SRP54P61011 RPS3AP1-201ENST00000413190 320 ntBASIC0.83□□□□□ -2.28
SRP54P61011 MLLT10P1-201ENST00000418346 262 ntBASIC0.83□□□□□ -2.28
SRP54P61011 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.83□□□□□ -2.28
SRP54P61011 FABP5P4-201ENST00000437203 171 ntBASIC0.83□□□□□ -2.28
SRP54P61011 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.83□□□□□ -2.28
SRP54P61011 RNU6-197P-201ENST00000516680 100 ntBASIC0.83□□□□□ -2.28
SRP54P61011 RNU7-116P-201ENST00000516940 62 ntBASIC0.83□□□□□ -2.28
SRP54P61011 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.83□□□□□ -2.28
SRP54P61011 AC006600.1-201ENST00000572529 153 ntBASIC0.83□□□□□ -2.28
SRP54P61011 MTND4LP32-201ENST00000636111 270 ntBASIC0.83□□□□□ -2.28
SRP54P61011 RNU6-708P-201ENST00000384217 107 ntBASIC0.82□□□□□ -2.28
SRP54P61011 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.82□□□□□ -2.28
SRP54P61011 RNA5SP255-201ENST00000516370 107 ntBASIC0.82□□□□□ -2.28
SRP54P61011 Y_RNA.718-201ENST00000517110 102 ntBASIC0.82□□□□□ -2.28
SRP54P61011 SEPT14P17-201ENST00000617978 177 ntBASIC0.82□□□□□ -2.28
SRP54P61011 MIR4272-201ENST00000635924 64 ntBASIC0.82□□□□□ -2.28
SRP54P61011 Y_RNA.462-201ENST00000384268 102 ntBASIC0.81□□□□□ -2.28
SRP54P61011 MIR608-201ENST00000384820 100 ntBASIC0.81□□□□□ -2.28
SRP54P61011 AC096644.2-201ENST00000429278 159 ntBASIC0.81□□□□□ -2.28
SRP54P61011 SNRPGP10-201ENST00000432323 225 ntBASIC0.81□□□□□ -2.28
SRP54P61011 SNORD116.3-201ENST00000517176 78 ntBASIC0.81□□□□□ -2.28
SRP54P61011 MIR4764-201ENST00000580680 88 ntBASIC0.81□□□□□ -2.28
SRP54P61011 UBE2V2P2-201ENST00000587677 504 ntBASIC0.81□□□□□ -2.28
SRP54P61011 AC007742.2-201ENST00000618226 398 ntBASIC0.81□□□□□ -2.28
SRP54P61011 AL138825.1-201ENST00000618587 192 ntBASIC0.81□□□□□ -2.28
SRP54P61011 MIR1302-1-201ENST00000637932 143 ntBASIC0.81□□□□□ -2.28
SRP54P61011 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SRP54P61011 Y_RNA.354-201ENST00000365448 111 ntBASIC0.8□□□□□ -2.28
SRP54P61011 Y_RNA.368-201ENST00000365547 113 ntBASIC0.8□□□□□ -2.28
SRP54P61011 Y_RNA.456-201ENST00000384232 111 ntBASIC0.8□□□□□ -2.28
SRP54P61011 Y_RNA.463-201ENST00000384271 102 ntBASIC0.8□□□□□ -2.28
SRP54P61011 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
SRP54P61011 AC024067.1-201ENST00000426199 223 ntBASIC0.8□□□□□ -2.28
SRP54P61011 AC004941.2-201ENST00000427009 228 ntBASIC0.8□□□□□ -2.28
SRP54P61011 RNU7-152P-201ENST00000458982 64 ntBASIC0.8□□□□□ -2.28
SRP54P61011 PSMC1P5-201ENST00000512850 177 ntBASIC0.8□□□□□ -2.28
SRP54P61011 RNU7-41P-201ENST00000515917 61 ntBASIC0.8□□□□□ -2.28
SRP54P61011 SNORA18.7-201ENST00000516910 131 ntBASIC0.8□□□□□ -2.28
SRP54P61011 AC087685.1-201ENST00000587507 141 ntBASIC0.8□□□□□ -2.28
SRP54P61011 Y_RNA.772-201ENST00000606692 102 ntBASIC0.8□□□□□ -2.28
SRP54P61011 AC108706.1-201ENST00000611053 297 ntBASIC0.8□□□□□ -2.28
SRP54P61011 AL442644.1-201ENST00000454390 3105 ntBASIC0.8□□□□□ -2.28
SRP54P61011 Y_RNA.70-201ENST00000362886 110 ntBASIC0.79□□□□□ -2.28
SRP54P61011 RNY1-201ENST00000364228 113 ntBASIC0.79□□□□□ -2.28
SRP54P61011 SNORD50B-201ENST00000364995 70 ntBASIC0.79□□□□□ -2.28
SRP54P61011 Y_RNA.310-201ENST00000365063 113 ntBASIC0.79□□□□□ -2.28
SRP54P61011 Y_RNA.341-201ENST00000365341 102 ntBASIC0.79□□□□□ -2.28
SRP54P61011 MIR1185-1-201ENST00000408598 86 ntBASIC0.79□□□□□ -2.28
SRP54P61011 MTCO2P27-201ENST00000420740 428 ntBASIC0.79□□□□□ -2.28
SRP54P61011 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.79□□□□□ -2.28
SRP54P61011 SNORD123-201ENST00000459473 70 ntBASIC0.79□□□□□ -2.28
SRP54P61011 MIR5000-201ENST00000577717 103 ntBASIC0.79□□□□□ -2.28
SRP54P61011 MIR4653-201ENST00000585107 83 ntBASIC0.79□□□□□ -2.28
SRP54P61011 AL132765.2-201ENST00000610812 351 ntBASIC0.79□□□□□ -2.28
SRP54P61011 MIR6515-201ENST00000619843 57 ntBASIC0.79□□□□□ -2.28
SRP54P61011 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
SRP54P61011 SNORD14E-201ENST00000364009 85 ntBASIC0.78□□□□□ -2.28
SRP54P61011 Y_RNA.330-201ENST00000365230 109 ntBASIC0.78□□□□□ -2.28
SRP54P61011 RNU6-351P-201ENST00000516097 100 ntBASIC0.78□□□□□ -2.28
SRP54P61011 RN7SKP164-201ENST00000516138 266 ntBASIC0.78□□□□□ -2.28
SRP54P61011 RNU11-2P-201ENST00000516898 142 ntBASIC0.78□□□□□ -2.28
SRP54P61011 AC136628.3-201ENST00000521868 290 ntBASIC0.78□□□□□ -2.28
SRP54P61011 AC131055.1-201ENST00000584626 316 ntBASIC0.78□□□□□ -2.28
SRP54P61011 AP003357.1-201ENST00000604497 148 ntBASIC0.78□□□□□ -2.28
SRP54P61011 AC091925.1-201ENST00000623204 462 ntBASIC0.78□□□□□ -2.28
SRP54P61011 Y_RNA.187-201ENST00000363918 113 ntBASIC0.77□□□□□ -2.29
SRP54P61011 Y_RNA.331-201ENST00000365267 102 ntBASIC0.77□□□□□ -2.29
SRP54P61011 Y_RNA.390-201ENST00000383932 102 ntBASIC0.77□□□□□ -2.29
SRP54P61011 AL606490.4-201ENST00000423117 127 ntBASIC0.77□□□□□ -2.29
SRP54P61011 AC091951.2-201ENST00000500762 203 ntBASIC0.77□□□□□ -2.29
SRP54P61011 POLR3GP1-201ENST00000594073 261 ntBASIC0.77□□□□□ -2.29
SRP54P61011 AL121655.1-201ENST00000605811 308 ntBASIC0.77□□□□□ -2.29
SRP54P61011 RNU6-1115P-201ENST00000362490 106 ntBASIC0.76□□□□□ -2.29
SRP54P61011 Y_RNA.39-201ENST00000362620 98 ntBASIC0.76□□□□□ -2.29
SRP54P61011 SNORA25.3-201ENST00000363205 127 ntBASIC0.76□□□□□ -2.29
SRP54P61011 Y_RNA.203-201ENST00000364106 102 ntBASIC0.76□□□□□ -2.29
SRP54P61011 RNU1-115P-201ENST00000365329 160 ntBASIC0.76□□□□□ -2.29
SRP54P61011 SNORD38C-201ENST00000384381 69 ntBASIC0.76□□□□□ -2.29
SRP54P61011 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.76□□□□□ -2.29
SRP54P61011 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.76□□□□□ -2.29
SRP54P61011 AC006461.1-201ENST00000412637 326 ntBASIC0.76□□□□□ -2.29
SRP54P61011 FGF7P4-201ENST00000509595 295 ntBASIC0.76□□□□□ -2.29
SRP54P61011 AC109810.1-201ENST00000534066 224 ntBASIC0.76□□□□□ -2.29
SRP54P61011 AC005730.3-201ENST00000583067 366 ntBASIC0.76□□□□□ -2.29
SRP54P61011 JPX_2.1-201ENST00000614161 69 ntBASIC0.76□□□□□ -2.29
SRP54P61011 AC106800.4-201ENST00000614905 153 ntBASIC0.76□□□□□ -2.29
SRP54P61011 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.76□□□□□ -2.29
SRP54P61011 AC084781.2-201ENST00000615568 161 ntBASIC0.76□□□□□ -2.29
SRP54P61011 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
SRP54P61011 RNU6-1283P-201ENST00000365314 105 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms