Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 RNU4-62P-201ENST00000410125 130 ntBASIC1.67□□□□□ -2.14
CLDN2P57739 SNORA36B-201ENST00000410438 131 ntBASIC1.67□□□□□ -2.14
CLDN2P57739 RNU2-38P-201ENST00000410856 79 ntBASIC1.67□□□□□ -2.14
CLDN2P57739 BTF3P11-201ENST00000426582 477 ntBASIC1.67□□□□□ -2.14
CLDN2P57739 AC073349.3-201ENST00000617616 186 ntBASIC1.67□□□□□ -2.14
CLDN2P57739 AL513423.1-201ENST00000621695 132 ntBASIC1.67□□□□□ -2.14
CLDN2P57739 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
CLDN2P57739 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
CLDN2P57739 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CLDN2P57739 RNU6-1123P-201ENST00000362347 106 ntBASIC1.66□□□□□ -2.14
CLDN2P57739 Y_RNA.82-201ENST00000363000 102 ntBASIC1.66□□□□□ -2.14
CLDN2P57739 Y_RNA.92-201ENST00000363043 102 ntBASIC1.66□□□□□ -2.14
CLDN2P57739 RNU6-674P-201ENST00000363831 107 ntBASIC1.66□□□□□ -2.14
CLDN2P57739 Y_RNA.235-201ENST00000364412 102 ntBASIC1.66□□□□□ -2.14
CLDN2P57739 Y_RNA.306-201ENST00000365015 102 ntBASIC1.66□□□□□ -2.14
CLDN2P57739 Y_RNA.312-201ENST00000365089 102 ntBASIC1.66□□□□□ -2.14
CLDN2P57739 Y_RNA.322-201ENST00000365151 102 ntBASIC1.66□□□□□ -2.14
CLDN2P57739 Y_RNA.350-201ENST00000365409 98 ntBASIC1.66□□□□□ -2.14
CLDN2P57739 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.66□□□□□ -2.14
CLDN2P57739 AL161935.2-201ENST00000414627 60 ntBASIC1.66□□□□□ -2.14
CLDN2P57739 BTF3P4-201ENST00000418852 495 ntBASIC1.66□□□□□ -2.14
CLDN2P57739 PGBD4P5-201ENST00000445958 426 ntBASIC1.66□□□□□ -2.14
CLDN2P57739 Y_RNA.650-201ENST00000459002 102 ntBASIC1.66□□□□□ -2.14
CLDN2P57739 RNU6-437P-201ENST00000459408 95 ntBASIC1.66□□□□□ -2.14
CLDN2P57739 AC099513.1-201ENST00000490423 301 ntBASIC1.66□□□□□ -2.14
CLDN2P57739 OR9P1P-201ENST00000496431 281 ntBASIC1.66□□□□□ -2.14
CLDN2P57739 Y_RNA.777-201ENST00000516982 102 ntBASIC1.66□□□□□ -2.14
CLDN2P57739 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.66□□□□□ -2.14
CLDN2P57739 MIR5692C2-201ENST00000577959 77 ntBASIC1.66□□□□□ -2.14
CLDN2P57739 MIR2681-201ENST00000581814 105 ntBASIC1.66□□□□□ -2.14
CLDN2P57739 AC005357.1-201ENST00000588399 301 ntBASIC1.66□□□□□ -2.14
CLDN2P57739 Y_RNA.771-201ENST00000598668 102 ntBASIC1.66□□□□□ -2.14
CLDN2P57739 Y_RNA.789-201ENST00000622480 102 ntBASIC1.66□□□□□ -2.14
CLDN2P57739 snoU18.1-201ENST00000629629 71 ntBASIC1.66□□□□□ -2.14
CLDN2P57739 AC134026.1-201ENST00000623249 2239 ntBASIC1.65□□□□□ -2.15
CLDN2P57739 MIR378A-201ENST00000362177 66 ntBASIC1.65□□□□□ -2.15
CLDN2P57739 RNU6-1205P-201ENST00000363625 106 ntBASIC1.65□□□□□ -2.15
CLDN2P57739 Y_RNA.203-201ENST00000364106 102 ntBASIC1.65□□□□□ -2.15
CLDN2P57739 RNU4-41P-201ENST00000364426 143 ntBASIC1.65□□□□□ -2.15
CLDN2P57739 RNU6-740P-201ENST00000364734 105 ntBASIC1.65□□□□□ -2.15
CLDN2P57739 Y_RNA.478-201ENST00000384358 107 ntBASIC1.65□□□□□ -2.15
CLDN2P57739 MIR194-1-201ENST00000384892 85 ntBASIC1.65□□□□□ -2.15
CLDN2P57739 SNORA12.1-201ENST00000390873 148 ntBASIC1.65□□□□□ -2.15
CLDN2P57739 SNORD2.1-201ENST00000458762 69 ntBASIC1.65□□□□□ -2.15
CLDN2P57739 Y_RNA.714-201ENST00000517065 90 ntBASIC1.65□□□□□ -2.15
CLDN2P57739 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.65□□□□□ -2.15
CLDN2P57739 uc_338.20-201ENST00000621563 178 ntBASIC1.65□□□□□ -2.15
CLDN2P57739 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.65□□□□□ -2.15
CLDN2P57739 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.65□□□□□ -2.15
CLDN2P57739 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.64□□□□□ -2.15
CLDN2P57739 MIR424-201ENST00000362227 98 ntBASIC1.64□□□□□ -2.15
CLDN2P57739 U8.5-201ENST00000364528 136 ntBASIC1.64□□□□□ -2.15
CLDN2P57739 Y_RNA.253-201ENST00000364562 112 ntBASIC1.64□□□□□ -2.15
CLDN2P57739 Y_RNA.416-201ENST00000384014 113 ntBASIC1.64□□□□□ -2.15
CLDN2P57739 RNU6-203P-201ENST00000384038 104 ntBASIC1.64□□□□□ -2.15
CLDN2P57739 AL603910.2-201ENST00000407268 136 ntBASIC1.64□□□□□ -2.15
CLDN2P57739 RNU2-40P-201ENST00000410833 196 ntBASIC1.64□□□□□ -2.15
CLDN2P57739 AC004965.1-201ENST00000413033 213 ntBASIC1.64□□□□□ -2.15
CLDN2P57739 Z98949.2-201ENST00000440996 144 ntBASIC1.64□□□□□ -2.15
CLDN2P57739 HMGN1P7-201ENST00000491722 313 ntBASIC1.64□□□□□ -2.15
CLDN2P57739 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.64□□□□□ -2.15
CLDN2P57739 AC108729.3-201ENST00000513484 108 ntBASIC1.64□□□□□ -2.15
CLDN2P57739 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.64□□□□□ -2.15
CLDN2P57739 SNORA77B-201ENST00000578179 125 ntBASIC1.64□□□□□ -2.15
CLDN2P57739 MIR3618-201ENST00000580330 88 ntBASIC1.64□□□□□ -2.15
CLDN2P57739 MIR4762-201ENST00000585261 75 ntBASIC1.64□□□□□ -2.15
CLDN2P57739 BX284668.6-201ENST00000606899 438 ntBASIC1.64□□□□□ -2.15
CLDN2P57739 AL008718.3-201ENST00000610217 321 ntBASIC1.64□□□□□ -2.15
CLDN2P57739 AL591926.4-201ENST00000616895 298 ntBASIC1.64□□□□□ -2.15
CLDN2P57739 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CLDN2P57739 RNU6-211P-201ENST00000384047 107 ntBASIC1.63□□□□□ -2.15
CLDN2P57739 RNU6-574P-201ENST00000384265 107 ntBASIC1.63□□□□□ -2.15
CLDN2P57739 RNU6-424P-201ENST00000384367 105 ntBASIC1.63□□□□□ -2.15
CLDN2P57739 Y_RNA.590-201ENST00000410140 107 ntBASIC1.63□□□□□ -2.15
CLDN2P57739 AC008834.1-201ENST00000511612 175 ntBASIC1.63□□□□□ -2.15
CLDN2P57739 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.63□□□□□ -2.15
CLDN2P57739 MIR4255-201ENST00000579351 72 ntBASIC1.63□□□□□ -2.15
CLDN2P57739 MIR5688-201ENST00000580619 83 ntBASIC1.63□□□□□ -2.15
CLDN2P57739 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
CLDN2P57739 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.62□□□□□ -2.15
CLDN2P57739 Y_RNA.117-201ENST00000363294 101 ntBASIC1.62□□□□□ -2.15
CLDN2P57739 Y_RNA.164-201ENST00000363709 102 ntBASIC1.62□□□□□ -2.15
CLDN2P57739 SNORD48-201ENST00000364953 64 ntBASIC1.62□□□□□ -2.15
CLDN2P57739 RNU6-969P-201ENST00000383900 105 ntBASIC1.62□□□□□ -2.15
CLDN2P57739 MIR660-201ENST00000385235 97 ntBASIC1.62□□□□□ -2.15
CLDN2P57739 snoU13.9-201ENST00000458927 103 ntBASIC1.62□□□□□ -2.15
CLDN2P57739 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.62□□□□□ -2.15
CLDN2P57739 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.62□□□□□ -2.15
CLDN2P57739 CBX3P4-201ENST00000538909 354 ntBASIC1.62□□□□□ -2.15
CLDN2P57739 MIR4498-201ENST00000577599 66 ntBASIC1.62□□□□□ -2.15
CLDN2P57739 MIR4282-201ENST00000583613 67 ntBASIC1.62□□□□□ -2.15
CLDN2P57739 JPX_2.1-201ENST00000614161 69 ntBASIC1.62□□□□□ -2.15
CLDN2P57739 MIR126-201ENST00000362291 85 ntBASIC1.61□□□□□ -2.15
CLDN2P57739 Y_RNA.20-201ENST00000362479 113 ntBASIC1.61□□□□□ -2.15
CLDN2P57739 Y_RNA.54-201ENST00000362766 105 ntBASIC1.61□□□□□ -2.15
CLDN2P57739 SNORD68-201ENST00000363214 84 ntBASIC1.61□□□□□ -2.15
CLDN2P57739 Y_RNA.122-201ENST00000363331 96 ntBASIC1.61□□□□□ -2.15
CLDN2P57739 Y_RNA.401-201ENST00000383965 117 ntBASIC1.61□□□□□ -2.15
CLDN2P57739 MIR526A2-201ENST00000390198 65 ntBASIC1.61□□□□□ -2.15
CLDN2P57739 SNORA67.5-201ENST00000391036 107 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms