Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 MIR222-201ENST00000384992 110 ntBASIC1.28□□□□□ -2.2
RIPK4P57078 RNU6-651P-201ENST00000411040 105 ntBASIC1.28□□□□□ -2.2
RIPK4P57078 RNU2-14P-201ENST00000411053 191 ntBASIC1.28□□□□□ -2.2
RIPK4P57078 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.28□□□□□ -2.2
RIPK4P57078 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.28□□□□□ -2.2
RIPK4P57078 AL606517.2-201ENST00000442855 241 ntBASIC1.28□□□□□ -2.2
RIPK4P57078 RNA5SP20-201ENST00000515976 84 ntBASIC1.28□□□□□ -2.2
RIPK4P57078 RNU6-1143P-201ENST00000516125 104 ntBASIC1.28□□□□□ -2.2
RIPK4P57078 AC024995.1-201ENST00000523014 93 ntBASIC1.28□□□□□ -2.2
RIPK4P57078 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.28□□□□□ -2.2
RIPK4P57078 MIR4643-201ENST00000577473 78 ntBASIC1.28□□□□□ -2.2
RIPK4P57078 AC012433.1-201ENST00000588916 398 ntBASIC1.28□□□□□ -2.2
RIPK4P57078 U6.73-201ENST00000619194 103 ntBASIC1.28□□□□□ -2.2
RIPK4P57078 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
RIPK4P57078 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.28□□□□□ -2.2
RIPK4P57078 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
RIPK4P57078 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.27□□□□□ -2.21
RIPK4P57078 RNU4-90P-201ENST00000362773 141 ntBASIC1.27□□□□□ -2.21
RIPK4P57078 RNU6-1048P-201ENST00000364054 107 ntBASIC1.27□□□□□ -2.21
RIPK4P57078 RNU6-407P-201ENST00000365280 104 ntBASIC1.27□□□□□ -2.21
RIPK4P57078 SNORD114-22-201ENST00000365423 72 ntBASIC1.27□□□□□ -2.21
RIPK4P57078 SNORD26-201ENST00000384147 75 ntBASIC1.27□□□□□ -2.21
RIPK4P57078 RNU6-196P-201ENST00000384315 107 ntBASIC1.27□□□□□ -2.21
RIPK4P57078 RNU6-136P-201ENST00000384663 107 ntBASIC1.27□□□□□ -2.21
RIPK4P57078 Y_RNA.569-201ENST00000384749 103 ntBASIC1.27□□□□□ -2.21
RIPK4P57078 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
RIPK4P57078 RNA5SP511-201ENST00000410487 115 ntBASIC1.27□□□□□ -2.21
RIPK4P57078 RNU2-7P-201ENST00000410794 178 ntBASIC1.27□□□□□ -2.21
RIPK4P57078 RNU2-38P-201ENST00000410856 79 ntBASIC1.27□□□□□ -2.21
RIPK4P57078 MTCO1P5-201ENST00000433573 344 ntBASIC1.27□□□□□ -2.21
RIPK4P57078 SNORD127-201ENST00000458892 86 ntBASIC1.27□□□□□ -2.21
RIPK4P57078 snoU13.18-201ENST00000459483 104 ntBASIC1.27□□□□□ -2.21
RIPK4P57078 TRBVB-201ENST00000477100 408 ntBASIC1.27□□□□□ -2.21
RIPK4P57078 AL163195.1-201ENST00000496941 348 ntBASIC1.27□□□□□ -2.21
RIPK4P57078 Y_RNA.668-201ENST00000516233 93 ntBASIC1.27□□□□□ -2.21
RIPK4P57078 RNU6-1337P-201ENST00000516525 95 ntBASIC1.27□□□□□ -2.21
RIPK4P57078 AC006380.1-201ENST00000603598 186 ntBASIC1.27□□□□□ -2.21
RIPK4P57078 7SK.10-201ENST00000621414 298 ntBASIC1.27□□□□□ -2.21
RIPK4P57078 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.27□□□□□ -2.21
RIPK4P57078 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
RIPK4P57078 RNU6-290P-201ENST00000365212 101 ntBASIC1.26□□□□□ -2.21
RIPK4P57078 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.26□□□□□ -2.21
RIPK4P57078 SNORA22-201ENST00000383907 134 ntBASIC1.26□□□□□ -2.21
RIPK4P57078 SNORA22C-201ENST00000384614 134 ntBASIC1.26□□□□□ -2.21
RIPK4P57078 MIR1302-6-201ENST00000408466 90 ntBASIC1.26□□□□□ -2.21
RIPK4P57078 RNU6-1186P-201ENST00000410429 97 ntBASIC1.26□□□□□ -2.21
RIPK4P57078 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.26□□□□□ -2.21
RIPK4P57078 AC008134.1-201ENST00000420943 193 ntBASIC1.26□□□□□ -2.21
RIPK4P57078 snoU13.27-201ENST00000459278 104 ntBASIC1.26□□□□□ -2.21
RIPK4P57078 RPS26P55-201ENST00000471178 356 ntBASIC1.26□□□□□ -2.21
RIPK4P57078 RPS27P22-201ENST00000478056 241 ntBASIC1.26□□□□□ -2.21
RIPK4P57078 RNU6-191P-201ENST00000516295 94 ntBASIC1.26□□□□□ -2.21
RIPK4P57078 RNU6-902P-201ENST00000517212 91 ntBASIC1.26□□□□□ -2.21
RIPK4P57078 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.26□□□□□ -2.21
RIPK4P57078 AC015688.6-201ENST00000577737 104 ntBASIC1.26□□□□□ -2.21
RIPK4P57078 MIR3149-201ENST00000584629 83 ntBASIC1.26□□□□□ -2.21
RIPK4P57078 MIR4438-201ENST00000585271 93 ntBASIC1.26□□□□□ -2.21
RIPK4P57078 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.26□□□□□ -2.21
RIPK4P57078 AC095038.3-201ENST00000634439 195 ntBASIC1.26□□□□□ -2.21
RIPK4P57078 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.26□□□□□ -2.21
RIPK4P57078 SNORD33-201ENST00000362761 85 ntBASIC1.25□□□□□ -2.21
RIPK4P57078 Y_RNA.116-201ENST00000363292 103 ntBASIC1.25□□□□□ -2.21
RIPK4P57078 Y_RNA.136-201ENST00000363444 102 ntBASIC1.25□□□□□ -2.21
RIPK4P57078 SNORD1A-201ENST00000364968 72 ntBASIC1.25□□□□□ -2.21
RIPK4P57078 Y_RNA.310-201ENST00000365063 113 ntBASIC1.25□□□□□ -2.21
RIPK4P57078 Y_RNA.452-201ENST00000384202 108 ntBASIC1.25□□□□□ -2.21
RIPK4P57078 RNU6-662P-201ENST00000384253 104 ntBASIC1.25□□□□□ -2.21
RIPK4P57078 Y_RNA.518-201ENST00000384552 113 ntBASIC1.25□□□□□ -2.21
RIPK4P57078 MIR873-201ENST00000401120 77 ntBASIC1.25□□□□□ -2.21
RIPK4P57078 MIR1253-201ENST00000408273 105 ntBASIC1.25□□□□□ -2.21
RIPK4P57078 AL390729.2-201ENST00000416137 156 ntBASIC1.25□□□□□ -2.21
RIPK4P57078 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.25□□□□□ -2.21
RIPK4P57078 POLR2KP2-201ENST00000438155 177 ntBASIC1.25□□□□□ -2.21
RIPK4P57078 AC027119.1-201ENST00000440877 241 ntBASIC1.25□□□□□ -2.21
RIPK4P57078 RPS27P1-201ENST00000450552 247 ntBASIC1.25□□□□□ -2.21
RIPK4P57078 U8.19-201ENST00000459095 133 ntBASIC1.25□□□□□ -2.21
RIPK4P57078 Y_RNA.637-201ENST00000459424 114 ntBASIC1.25□□□□□ -2.21
RIPK4P57078 AC097462.1-201ENST00000514125 324 ntBASIC1.25□□□□□ -2.21
RIPK4P57078 SERF1AP1-201ENST00000514575 187 ntBASIC1.25□□□□□ -2.21
RIPK4P57078 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.25□□□□□ -2.21
RIPK4P57078 AC103810.9-201ENST00000606688 112 ntBASIC1.25□□□□□ -2.21
RIPK4P57078 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.25□□□□□ -2.21
RIPK4P57078 U4.1-201ENST00000620349 87 ntBASIC1.25□□□□□ -2.21
RIPK4P57078 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.25□□□□□ -2.21
RIPK4P57078 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.25□□□□□ -2.21
RIPK4P57078 ICE2P2-201ENST00000483823 2787 ntBASIC1.25□□□□□ -2.21
RIPK4P57078 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.24□□□□□ -2.21
RIPK4P57078 AC100821.1-201ENST00000523153 2479 ntBASIC1.24□□□□□ -2.21
RIPK4P57078 MIR373-201ENST00000362273 69 ntBASIC1.24□□□□□ -2.21
RIPK4P57078 Y_RNA.117-201ENST00000363294 101 ntBASIC1.24□□□□□ -2.21
RIPK4P57078 RNU6-713P-201ENST00000384761 107 ntBASIC1.24□□□□□ -2.21
RIPK4P57078 RNA5SP109-201ENST00000391010 116 ntBASIC1.24□□□□□ -2.21
RIPK4P57078 SNORA26.5-201ENST00000391215 123 ntBASIC1.24□□□□□ -2.21
RIPK4P57078 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.24□□□□□ -2.21
RIPK4P57078 RNU6-1132P-201ENST00000459214 107 ntBASIC1.24□□□□□ -2.21
RIPK4P57078 RNU6-113P-201ENST00000516653 101 ntBASIC1.24□□□□□ -2.21
RIPK4P57078 RNU2-31P-201ENST00000516954 155 ntBASIC1.24□□□□□ -2.21
RIPK4P57078 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.24□□□□□ -2.21
RIPK4P57078 AC022217.4-201ENST00000604389 163 ntBASIC1.24□□□□□ -2.21
RIPK4P57078 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms