Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 MTCO3P10-201ENST00000455912 772 ntBASIC0.14□□□□□ -2.39
CLDN18P56856 AC108740.1-201ENST00000498629 225 ntBASIC0.14□□□□□ -2.39
CLDN18P56856 AP003327.1-201ENST00000529684 127 ntBASIC0.14□□□□□ -2.39
CLDN18P56856 AC018462.2-201ENST00000605375 395 ntBASIC0.14□□□□□ -2.39
CLDN18P56856 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.14□□□□□ -2.39
CLDN18P56856 MIR6718-201ENST00000616153 80 ntBASIC0.14□□□□□ -2.39
CLDN18P56856 MIR103A1-201ENST00000362165 78 ntBASIC0.13□□□□□ -2.39
CLDN18P56856 RNA5SP325-201ENST00000363756 130 ntBASIC0.13□□□□□ -2.39
CLDN18P56856 SNORA72-201ENST00000384339 132 ntBASIC0.13□□□□□ -2.39
CLDN18P56856 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
CLDN18P56856 RNA5SP63-201ENST00000391225 112 ntBASIC0.13□□□□□ -2.39
CLDN18P56856 RNU2-16P-201ENST00000410712 136 ntBASIC0.13□□□□□ -2.39
CLDN18P56856 RNA5SP127-201ENST00000411051 133 ntBASIC0.13□□□□□ -2.39
CLDN18P56856 MTND2P22-201ENST00000444325 1033 ntBASIC0.13□□□□□ -2.39
CLDN18P56856 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.13□□□□□ -2.39
CLDN18P56856 AC022523.2-201ENST00000561045 150 ntBASIC0.13□□□□□ -2.39
CLDN18P56856 MIR4771-2-201ENST00000577758 74 ntBASIC0.13□□□□□ -2.39
CLDN18P56856 MIR548AO-201ENST00000579992 96 ntBASIC0.13□□□□□ -2.39
CLDN18P56856 MIR4771-1-201ENST00000582617 74 ntBASIC0.13□□□□□ -2.39
CLDN18P56856 AC245008.1-201ENST00000608123 476 ntBASIC0.13□□□□□ -2.39
CLDN18P56856 AC240442.1-201ENST00000616055 283 ntBASIC0.13□□□□□ -2.39
CLDN18P56856 RNA5SP62-201ENST00000363457 110 ntBASIC0.12□□□□□ -2.39
CLDN18P56856 Y_RNA.361-201ENST00000365515 120 ntBASIC0.12□□□□□ -2.39
CLDN18P56856 Y_RNA.402-201ENST00000383972 102 ntBASIC0.12□□□□□ -2.39
CLDN18P56856 RNU6-926P-201ENST00000384075 107 ntBASIC0.12□□□□□ -2.39
CLDN18P56856 Y_RNA.476-201ENST00000384347 108 ntBASIC0.12□□□□□ -2.39
CLDN18P56856 MIR625-201ENST00000385047 85 ntBASIC0.12□□□□□ -2.39
CLDN18P56856 RNU6-205P-201ENST00000390858 107 ntBASIC0.12□□□□□ -2.39
CLDN18P56856 MIR1197-201ENST00000408818 88 ntBASIC0.12□□□□□ -2.39
CLDN18P56856 RNU6-1050P-201ENST00000410388 107 ntBASIC0.12□□□□□ -2.39
CLDN18P56856 CHEK2P4-201ENST00000450340 246 ntBASIC0.12□□□□□ -2.39
CLDN18P56856 Y_RNA.682-201ENST00000516457 100 ntBASIC0.12□□□□□ -2.39
CLDN18P56856 RNU6-506P-201ENST00000516553 94 ntBASIC0.12□□□□□ -2.39
CLDN18P56856 RNU6-1301P-201ENST00000362724 104 ntBASIC0.11□□□□□ -2.39
CLDN18P56856 Y_RNA.172-201ENST00000363765 102 ntBASIC0.11□□□□□ -2.39
CLDN18P56856 Y_RNA.594-201ENST00000410373 140 ntBASIC0.11□□□□□ -2.39
CLDN18P56856 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.11□□□□□ -2.39
CLDN18P56856 SNRPGP12-201ENST00000449481 213 ntBASIC0.11□□□□□ -2.39
CLDN18P56856 AC026782.1-201ENST00000512952 449 ntBASIC0.11□□□□□ -2.39
CLDN18P56856 RNU6-1016P-201ENST00000516689 94 ntBASIC0.11□□□□□ -2.39
CLDN18P56856 MIR2355-201ENST00000517199 87 ntBASIC0.11□□□□□ -2.39
CLDN18P56856 AC245505.1-201ENST00000556398 224 ntBASIC0.11□□□□□ -2.39
CLDN18P56856 MIR1244-1-201ENST00000612829 85 ntBASIC0.11□□□□□ -2.39
CLDN18P56856 JPX_2.1-201ENST00000614161 69 ntBASIC0.11□□□□□ -2.39
CLDN18P56856 Pinc.1-201ENST00000616452 154 ntBASIC0.11□□□□□ -2.39
CLDN18P56856 AL109933.3-201ENST00000619095 188 ntBASIC0.11□□□□□ -2.39
CLDN18P56856 MIR1244-3-201ENST00000635744 85 ntBASIC0.11□□□□□ -2.39
CLDN18P56856 MIR1244-2-201ENST00000636449 85 ntBASIC0.11□□□□□ -2.39
CLDN18P56856 MIR1244-4-202ENST00000636813 85 ntBASIC0.11□□□□□ -2.39
CLDN18P56856 Y_RNA.51-201ENST00000362725 102 ntBASIC0.1□□□□□ -2.39
CLDN18P56856 RNU6-961P-201ENST00000363893 105 ntBASIC0.1□□□□□ -2.39
CLDN18P56856 RNU6-442P-201ENST00000383968 104 ntBASIC0.1□□□□□ -2.39
CLDN18P56856 RNU6-767P-201ENST00000384132 107 ntBASIC0.1□□□□□ -2.39
CLDN18P56856 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
CLDN18P56856 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.1□□□□□ -2.39
CLDN18P56856 AC015818.7-201ENST00000428754 109 ntBASIC0.1□□□□□ -2.39
CLDN18P56856 AC087499.7-201ENST00000441958 109 ntBASIC0.1□□□□□ -2.39
CLDN18P56856 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.1□□□□□ -2.39
CLDN18P56856 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.1□□□□□ -2.39
CLDN18P56856 MIR2053-201ENST00000459295 91 ntBASIC0.1□□□□□ -2.39
CLDN18P56856 snoU13.21-201ENST00000459368 105 ntBASIC0.1□□□□□ -2.39
CLDN18P56856 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.1□□□□□ -2.39
CLDN18P56856 RNU6-369P-201ENST00000362515 102 ntBASIC0.09□□□□□ -2.4
CLDN18P56856 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
CLDN18P56856 RNU6-192P-201ENST00000391253 100 ntBASIC0.09□□□□□ -2.4
CLDN18P56856 U8.17-201ENST00000391292 132 ntBASIC0.09□□□□□ -2.4
CLDN18P56856 SNORA40.8-201ENST00000411034 126 ntBASIC0.09□□□□□ -2.4
CLDN18P56856 RNU2-61P-201ENST00000411069 191 ntBASIC0.09□□□□□ -2.4
CLDN18P56856 MTATP6P17-201ENST00000431030 672 ntBASIC0.09□□□□□ -2.4
CLDN18P56856 MTND5P5-201ENST00000503764 376 ntBASIC0.09□□□□□ -2.4
CLDN18P56856 AC093534.1-201ENST00000504977 132 ntBASIC0.09□□□□□ -2.4
CLDN18P56856 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.09□□□□□ -2.4
CLDN18P56856 SCARNA8-201ENST00000515924 131 ntBASIC0.09□□□□□ -2.4
CLDN18P56856 RNU6-155P-201ENST00000516347 100 ntBASIC0.09□□□□□ -2.4
CLDN18P56856 RNU4-77P-201ENST00000516692 156 ntBASIC0.09□□□□□ -2.4
CLDN18P56856 Y_RNA.708-201ENST00000516950 96 ntBASIC0.09□□□□□ -2.4
CLDN18P56856 AC015540.1-201ENST00000615828 501 ntBASIC0.09□□□□□ -2.4
CLDN18P56856 PISRT1.1-201ENST00000616930 107 ntBASIC0.09□□□□□ -2.4
CLDN18P56856 AC092794.2-201ENST00000620933 563 ntBASIC0.09□□□□□ -2.4
CLDN18P56856 Y_RNA.101-201ENST00000363154 102 ntBASIC0.08□□□□□ -2.4
CLDN18P56856 Y_RNA.301-201ENST00000364990 103 ntBASIC0.08□□□□□ -2.4
CLDN18P56856 MIR518A1-201ENST00000385068 85 ntBASIC0.08□□□□□ -2.4
CLDN18P56856 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.08□□□□□ -2.4
CLDN18P56856 MTCO2P27-201ENST00000420740 428 ntBASIC0.08□□□□□ -2.4
CLDN18P56856 HMGN1P10-201ENST00000474557 553 ntBASIC0.08□□□□□ -2.4
CLDN18P56856 RNU4-49P-201ENST00000516080 140 ntBASIC0.08□□□□□ -2.4
CLDN18P56856 AC055872.1-201ENST00000570978 278 ntBASIC0.08□□□□□ -2.4
CLDN18P56856 AC018638.8-201ENST00000588755 281 ntBASIC0.08□□□□□ -2.4
CLDN18P56856 uc_338.16-201ENST00000621804 95 ntBASIC0.08□□□□□ -2.4
CLDN18P56856 SNORD44.1-201ENST00000363202 61 ntBASIC0.07□□□□□ -2.4
CLDN18P56856 Y_RNA.157-201ENST00000363638 102 ntBASIC0.07□□□□□ -2.4
CLDN18P56856 Y_RNA.537-201ENST00000384626 109 ntBASIC0.07□□□□□ -2.4
CLDN18P56856 MT-TN-201ENST00000387400 73 ntBASIC0.07□□□□□ -2.4
CLDN18P56856 MIR1295A-201ENST00000408463 79 ntBASIC0.07□□□□□ -2.4
CLDN18P56856 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.07□□□□□ -2.4
CLDN18P56856 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.07□□□□□ -2.4
CLDN18P56856 AC116353.2-201ENST00000505332 712 ntBASIC0.07□□□□□ -2.4
CLDN18P56856 RNU6-307P-201ENST00000516743 106 ntBASIC0.07□□□□□ -2.4
CLDN18P56856 MIR4804-201ENST00000581683 73 ntBASIC0.07□□□□□ -2.4
CLDN18P56856 AC005899.2-201ENST00000584353 90 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms