Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 COX6CP14-201ENST00000469580 174 ntBASIC1.2□□□□□ -2.22
PEX3P56589 AC131281.1-201ENST00000522984 164 ntBASIC1.2□□□□□ -2.22
PEX3P56589 AL512310.8-201ENST00000550183 120 ntBASIC1.2□□□□□ -2.22
PEX3P56589 AP003357.1-201ENST00000604497 148 ntBASIC1.2□□□□□ -2.22
PEX3P56589 AC242852.1-201ENST00000612151 96 ntBASIC1.2□□□□□ -2.22
PEX3P56589 AL078604.3-201ENST00000615580 211 ntBASIC1.2□□□□□ -2.22
PEX3P56589 AC244015.1-201ENST00000622301 99 ntBASIC1.2□□□□□ -2.22
PEX3P56589 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
PEX3P56589 RNU6-801P-201ENST00000364087 105 ntBASIC1.19□□□□□ -2.22
PEX3P56589 RNU6-806P-201ENST00000365147 105 ntBASIC1.19□□□□□ -2.22
PEX3P56589 SNORD41-201ENST00000386967 70 ntBASIC1.19□□□□□ -2.22
PEX3P56589 RNU6-985P-201ENST00000410182 104 ntBASIC1.19□□□□□ -2.22
PEX3P56589 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.19□□□□□ -2.22
PEX3P56589 AC087343.1-201ENST00000477341 475 ntBASIC1.19□□□□□ -2.22
PEX3P56589 RNU6-917P-201ENST00000516294 104 ntBASIC1.19□□□□□ -2.22
PEX3P56589 RNU6-191P-201ENST00000516295 94 ntBASIC1.19□□□□□ -2.22
PEX3P56589 RNU6-165P-201ENST00000517170 99 ntBASIC1.19□□□□□ -2.22
PEX3P56589 AC127455.1-201ENST00000565496 145 ntBASIC1.19□□□□□ -2.22
PEX3P56589 MIR4778-201ENST00000577635 80 ntBASIC1.19□□□□□ -2.22
PEX3P56589 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.19□□□□□ -2.22
PEX3P56589 MIR26B-201ENST00000362251 77 ntBASIC1.18□□□□□ -2.22
PEX3P56589 RNU6-833P-201ENST00000363486 107 ntBASIC1.18□□□□□ -2.22
PEX3P56589 RNU6-969P-201ENST00000383900 105 ntBASIC1.18□□□□□ -2.22
PEX3P56589 MIR1285-1-201ENST00000408593 84 ntBASIC1.18□□□□□ -2.22
PEX3P56589 RPL21P38-201ENST00000418090 167 ntBASIC1.18□□□□□ -2.22
PEX3P56589 SNX2P2-201ENST00000424553 323 ntBASIC1.18□□□□□ -2.22
PEX3P56589 POLR2KP2-201ENST00000438155 177 ntBASIC1.18□□□□□ -2.22
PEX3P56589 RPL30P7-201ENST00000479312 323 ntBASIC1.18□□□□□ -2.22
PEX3P56589 RNU7-115P-201ENST00000516433 55 ntBASIC1.18□□□□□ -2.22
PEX3P56589 RNU6-1116P-201ENST00000517269 99 ntBASIC1.18□□□□□ -2.22
PEX3P56589 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.18□□□□□ -2.22
PEX3P56589 MIR3664-201ENST00000579074 99 ntBASIC1.18□□□□□ -2.22
PEX3P56589 MIR3937-201ENST00000580135 106 ntBASIC1.18□□□□□ -2.22
PEX3P56589 SNORD114-21-201ENST00000606412 72 ntBASIC1.18□□□□□ -2.22
PEX3P56589 AL121890.5-201ENST00000620848 304 ntBASIC1.18□□□□□ -2.22
PEX3P56589 AC027279.3-201ENST00000625055 122 ntBASIC1.18□□□□□ -2.22
PEX3P56589 AC068647.2-201ENST00000637380 353 ntBASIC1.18□□□□□ -2.22
PEX3P56589 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.18□□□□□ -2.22
PEX3P56589 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.17□□□□□ -2.22
PEX3P56589 MIR337-201ENST00000362281 93 ntBASIC1.17□□□□□ -2.22
PEX3P56589 RNU4-90P-201ENST00000362773 141 ntBASIC1.17□□□□□ -2.22
PEX3P56589 RNU6-199P-201ENST00000362954 107 ntBASIC1.17□□□□□ -2.22
PEX3P56589 Y_RNA.210-201ENST00000364161 110 ntBASIC1.17□□□□□ -2.22
PEX3P56589 Y_RNA.326-201ENST00000365176 113 ntBASIC1.17□□□□□ -2.22
PEX3P56589 SNORA72.4-201ENST00000384174 132 ntBASIC1.17□□□□□ -2.22
PEX3P56589 RNU6-1065P-201ENST00000384513 106 ntBASIC1.17□□□□□ -2.22
PEX3P56589 MIR526A1-201ENST00000384897 85 ntBASIC1.17□□□□□ -2.22
PEX3P56589 MIR522-201ENST00000385071 87 ntBASIC1.17□□□□□ -2.22
PEX3P56589 RNU2-14P-201ENST00000411053 191 ntBASIC1.17□□□□□ -2.22
PEX3P56589 AC098869.1-201ENST00000481627 292 ntBASIC1.17□□□□□ -2.22
PEX3P56589 CYCTP-201ENST00000504253 315 ntBASIC1.17□□□□□ -2.22
PEX3P56589 RNU6-764P-201ENST00000516396 105 ntBASIC1.17□□□□□ -2.22
PEX3P56589 RNU7-116P-201ENST00000516940 62 ntBASIC1.17□□□□□ -2.22
PEX3P56589 AC136628.3-201ENST00000521868 290 ntBASIC1.17□□□□□ -2.22
PEX3P56589 AC024405.2-202ENST00000532731 184 ntBASIC1.17□□□□□ -2.22
PEX3P56589 AC120024.3-201ENST00000603167 156 ntBASIC1.17□□□□□ -2.22
PEX3P56589 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.16□□□□□ -2.22
PEX3P56589 RNU6-770P-201ENST00000363929 105 ntBASIC1.16□□□□□ -2.22
PEX3P56589 U8.7-201ENST00000364940 136 ntBASIC1.16□□□□□ -2.22
PEX3P56589 RNU6-290P-201ENST00000365212 101 ntBASIC1.16□□□□□ -2.22
PEX3P56589 Y_RNA.541-201ENST00000384640 113 ntBASIC1.16□□□□□ -2.22
PEX3P56589 MIR215-201ENST00000384858 110 ntBASIC1.16□□□□□ -2.22
PEX3P56589 SNORA26.5-201ENST00000391215 123 ntBASIC1.16□□□□□ -2.22
PEX3P56589 Y_RNA.602-201ENST00000410535 92 ntBASIC1.16□□□□□ -2.22
PEX3P56589 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.16□□□□□ -2.22
PEX3P56589 MTCO1P5-201ENST00000433573 344 ntBASIC1.16□□□□□ -2.22
PEX3P56589 AC093850.1-201ENST00000454121 251 ntBASIC1.16□□□□□ -2.22
PEX3P56589 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.16□□□□□ -2.22
PEX3P56589 AC090049.2-201ENST00000550377 109 ntBASIC1.16□□□□□ -2.22
PEX3P56589 AL513534.2-201ENST00000603836 250 ntBASIC1.16□□□□□ -2.22
PEX3P56589 MIR548AY-201ENST00000617669 107 ntBASIC1.16□□□□□ -2.22
PEX3P56589 AC106754.2-201ENST00000623006 233 ntBASIC1.16□□□□□ -2.22
PEX3P56589 AC068700.1-201ENST00000565862 3754 ntBASIC1.16□□□□□ -2.22
PEX3P56589 RNU6-639P-201ENST00000384074 107 ntBASIC1.15□□□□□ -2.23
PEX3P56589 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
PEX3P56589 AC024067.1-201ENST00000426199 223 ntBASIC1.15□□□□□ -2.23
PEX3P56589 RNU7-141P-201ENST00000459304 62 ntBASIC1.15□□□□□ -2.23
PEX3P56589 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.15□□□□□ -2.23
PEX3P56589 AP003072.1-201ENST00000531740 145 ntBASIC1.15□□□□□ -2.23
PEX3P56589 CYP3A52P-201ENST00000563326 91 ntBASIC1.15□□□□□ -2.23
PEX3P56589 POLR3GP1-201ENST00000594073 261 ntBASIC1.15□□□□□ -2.23
PEX3P56589 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.15□□□□□ -2.23
PEX3P56589 Y_RNA.19-201ENST00000362462 99 ntBASIC1.14□□□□□ -2.23
PEX3P56589 SNORD114-27-201ENST00000363766 70 ntBASIC1.14□□□□□ -2.23
PEX3P56589 RNU6-1048P-201ENST00000364054 107 ntBASIC1.14□□□□□ -2.23
PEX3P56589 SNORA2.2-201ENST00000365473 135 ntBASIC1.14□□□□□ -2.23
PEX3P56589 RNU6-1105P-201ENST00000384774 107 ntBASIC1.14□□□□□ -2.23
PEX3P56589 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.14□□□□□ -2.23
PEX3P56589 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
PEX3P56589 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.14□□□□□ -2.23
PEX3P56589 AC113618.1-201ENST00000416747 285 ntBASIC1.14□□□□□ -2.23
PEX3P56589 U8.19-201ENST00000459095 133 ntBASIC1.14□□□□□ -2.23
PEX3P56589 AC117454.1-201ENST00000491120 168 ntBASIC1.14□□□□□ -2.23
PEX3P56589 MRPS35P2-201ENST00000508242 191 ntBASIC1.14□□□□□ -2.23
PEX3P56589 RNU7-12P-201ENST00000516030 62 ntBASIC1.14□□□□□ -2.23
PEX3P56589 SNORA40.15-201ENST00000516884 107 ntBASIC1.14□□□□□ -2.23
PEX3P56589 AC022140.2-201ENST00000623500 188 ntBASIC1.14□□□□□ -2.23
PEX3P56589 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.14□□□□□ -2.23
PEX3P56589 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
PEX3P56589 Y_RNA.64-201ENST00000362845 102 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms