Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 snoU18.1-201ENST00000629629 71 ntBASIC1.79□□□□□ -2.12
HDAC4P56524 AC068647.2-201ENST00000637380 353 ntBASIC1.79□□□□□ -2.12
HDAC4P56524 U6.104-201ENST00000637979 90 ntBASIC1.79□□□□□ -2.12
HDAC4P56524 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
HDAC4P56524 RNU6-414P-201ENST00000363705 104 ntBASIC1.78□□□□□ -2.12
HDAC4P56524 Y_RNA.447-201ENST00000384184 113 ntBASIC1.78□□□□□ -2.12
HDAC4P56524 Y_RNA.477-201ENST00000384352 108 ntBASIC1.78□□□□□ -2.12
HDAC4P56524 RNU6-950P-201ENST00000384651 107 ntBASIC1.78□□□□□ -2.12
HDAC4P56524 RNU6-997P-201ENST00000384725 107 ntBASIC1.78□□□□□ -2.12
HDAC4P56524 MIR562-201ENST00000384894 95 ntBASIC1.78□□□□□ -2.12
HDAC4P56524 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
HDAC4P56524 BTF3P4-201ENST00000418852 495 ntBASIC1.78□□□□□ -2.12
HDAC4P56524 MTND4LP30-201ENST00000454092 297 ntBASIC1.78□□□□□ -2.12
HDAC4P56524 snoU13.27-201ENST00000459278 104 ntBASIC1.78□□□□□ -2.12
HDAC4P56524 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.78□□□□□ -2.12
HDAC4P56524 AC117454.1-201ENST00000491120 168 ntBASIC1.78□□□□□ -2.12
HDAC4P56524 RNU7-115P-201ENST00000516433 55 ntBASIC1.78□□□□□ -2.12
HDAC4P56524 RNU6-1291P-201ENST00000516591 104 ntBASIC1.78□□□□□ -2.12
HDAC4P56524 RNU6-341P-201ENST00000516973 96 ntBASIC1.78□□□□□ -2.12
HDAC4P56524 AL512605.2-201ENST00000592972 256 ntBASIC1.78□□□□□ -2.12
HDAC4P56524 AP003357.1-201ENST00000604497 148 ntBASIC1.78□□□□□ -2.12
HDAC4P56524 AC037487.3-201ENST00000606668 112 ntBASIC1.78□□□□□ -2.12
HDAC4P56524 MIR8081-201ENST00000611533 95 ntBASIC1.78□□□□□ -2.12
HDAC4P56524 MIR8074-201ENST00000615081 81 ntBASIC1.78□□□□□ -2.12
HDAC4P56524 MIR8054-201ENST00000620877 86 ntBASIC1.78□□□□□ -2.12
HDAC4P56524 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.78□□□□□ -2.12
HDAC4P56524 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HDAC4P56524 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
HDAC4P56524 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
HDAC4P56524 SNORA1B-201ENST00000362535 133 ntBASIC1.77□□□□□ -2.13
HDAC4P56524 Y_RNA.350-201ENST00000365409 98 ntBASIC1.77□□□□□ -2.13
HDAC4P56524 Y_RNA.352-201ENST00000365439 102 ntBASIC1.77□□□□□ -2.13
HDAC4P56524 RNU6-514P-201ENST00000384208 107 ntBASIC1.77□□□□□ -2.13
HDAC4P56524 RNU6-1289P-201ENST00000384431 106 ntBASIC1.77□□□□□ -2.13
HDAC4P56524 MIR520G-201ENST00000385064 90 ntBASIC1.77□□□□□ -2.13
HDAC4P56524 RNU6-1248P-201ENST00000391096 64 ntBASIC1.77□□□□□ -2.13
HDAC4P56524 COX6CP10-201ENST00000416832 224 ntBASIC1.77□□□□□ -2.13
HDAC4P56524 SNORD2.1-201ENST00000458762 69 ntBASIC1.77□□□□□ -2.13
HDAC4P56524 RPL39P38-201ENST00000467018 153 ntBASIC1.77□□□□□ -2.13
HDAC4P56524 RNU6-970P-201ENST00000516312 107 ntBASIC1.77□□□□□ -2.13
HDAC4P56524 AC024405.2-202ENST00000532731 184 ntBASIC1.77□□□□□ -2.13
HDAC4P56524 AC011921.3-201ENST00000605540 361 ntBASIC1.77□□□□□ -2.13
HDAC4P56524 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.77□□□□□ -2.13
HDAC4P56524 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.77□□□□□ -2.13
HDAC4P56524 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
HDAC4P56524 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.77□□□□□ -2.13
HDAC4P56524 AC100821.1-201ENST00000523153 2479 ntBASIC1.77□□□□□ -2.13
HDAC4P56524 MIR424-201ENST00000362227 98 ntBASIC1.76□□□□□ -2.13
HDAC4P56524 Y_RNA.60-201ENST00000362831 98 ntBASIC1.76□□□□□ -2.13
HDAC4P56524 Y_RNA.76-201ENST00000362931 109 ntBASIC1.76□□□□□ -2.13
HDAC4P56524 Y_RNA.277-201ENST00000364754 102 ntBASIC1.76□□□□□ -2.13
HDAC4P56524 SNORA17.3-201ENST00000391159 129 ntBASIC1.76□□□□□ -2.13
HDAC4P56524 SNORD58.1-201ENST00000391313 66 ntBASIC1.76□□□□□ -2.13
HDAC4P56524 FTH1P12-201ENST00000432137 551 ntBASIC1.76□□□□□ -2.13
HDAC4P56524 MIR4255-201ENST00000579351 72 ntBASIC1.76□□□□□ -2.13
HDAC4P56524 MIR3683-201ENST00000580847 82 ntBASIC1.76□□□□□ -2.13
HDAC4P56524 MIR4282-201ENST00000583613 67 ntBASIC1.76□□□□□ -2.13
HDAC4P56524 AL929325.1-201ENST00000603096 117 ntBASIC1.76□□□□□ -2.13
HDAC4P56524 MIR548AY-201ENST00000617669 107 ntBASIC1.76□□□□□ -2.13
HDAC4P56524 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.76□□□□□ -2.13
HDAC4P56524 Y_RNA.82-201ENST00000363000 102 ntBASIC1.75□□□□□ -2.13
HDAC4P56524 Y_RNA.92-201ENST00000363043 102 ntBASIC1.75□□□□□ -2.13
HDAC4P56524 RNU4-13P-201ENST00000364019 141 ntBASIC1.75□□□□□ -2.13
HDAC4P56524 Y_RNA.235-201ENST00000364412 102 ntBASIC1.75□□□□□ -2.13
HDAC4P56524 Y_RNA.267-201ENST00000364679 109 ntBASIC1.75□□□□□ -2.13
HDAC4P56524 Y_RNA.306-201ENST00000365015 102 ntBASIC1.75□□□□□ -2.13
HDAC4P56524 Y_RNA.312-201ENST00000365089 102 ntBASIC1.75□□□□□ -2.13
HDAC4P56524 Y_RNA.322-201ENST00000365151 102 ntBASIC1.75□□□□□ -2.13
HDAC4P56524 RNU6-1080P-201ENST00000383982 107 ntBASIC1.75□□□□□ -2.13
HDAC4P56524 Y_RNA.416-201ENST00000384014 113 ntBASIC1.75□□□□□ -2.13
HDAC4P56524 RNU6-440P-201ENST00000390882 105 ntBASIC1.75□□□□□ -2.13
HDAC4P56524 RNU6-360P-201ENST00000390944 104 ntBASIC1.75□□□□□ -2.13
HDAC4P56524 AL627390.1-201ENST00000396055 340 ntBASIC1.75□□□□□ -2.13
HDAC4P56524 MIR934-201ENST00000401241 83 ntBASIC1.75□□□□□ -2.13
HDAC4P56524 MTCO2P33-201ENST00000402100 465 ntBASIC1.75□□□□□ -2.13
HDAC4P56524 BTF3P11-201ENST00000426582 477 ntBASIC1.75□□□□□ -2.13
HDAC4P56524 Y_RNA.650-201ENST00000459002 102 ntBASIC1.75□□□□□ -2.13
HDAC4P56524 RNU7-34P-201ENST00000459394 64 ntBASIC1.75□□□□□ -2.13
HDAC4P56524 AC099513.1-201ENST00000490423 301 ntBASIC1.75□□□□□ -2.13
HDAC4P56524 Y_RNA.777-201ENST00000516982 102 ntBASIC1.75□□□□□ -2.13
HDAC4P56524 AC011604.1-201ENST00000545978 196 ntBASIC1.75□□□□□ -2.13
HDAC4P56524 AC127455.1-201ENST00000565496 145 ntBASIC1.75□□□□□ -2.13
HDAC4P56524 MIR4709-201ENST00000577272 72 ntBASIC1.75□□□□□ -2.13
HDAC4P56524 AC005357.1-201ENST00000588399 301 ntBASIC1.75□□□□□ -2.13
HDAC4P56524 POLR3GP1-201ENST00000594073 261 ntBASIC1.75□□□□□ -2.13
HDAC4P56524 Y_RNA.771-201ENST00000598668 102 ntBASIC1.75□□□□□ -2.13
HDAC4P56524 Y_RNA.789-201ENST00000622480 102 ntBASIC1.75□□□□□ -2.13
HDAC4P56524 Y_RNA.20-201ENST00000362479 113 ntBASIC1.74□□□□□ -2.13
HDAC4P56524 RNA5SP190-201ENST00000365222 118 ntBASIC1.74□□□□□ -2.13
HDAC4P56524 RNU6-211P-201ENST00000384047 107 ntBASIC1.74□□□□□ -2.13
HDAC4P56524 SNORA72-201ENST00000384339 132 ntBASIC1.74□□□□□ -2.13
HDAC4P56524 MIR1267-201ENST00000408723 78 ntBASIC1.74□□□□□ -2.13
HDAC4P56524 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.74□□□□□ -2.13
HDAC4P56524 SNORA25.15-201ENST00000516487 89 ntBASIC1.74□□□□□ -2.13
HDAC4P56524 RNU2-56P-201ENST00000516826 190 ntBASIC1.74□□□□□ -2.13
HDAC4P56524 MIR4285-201ENST00000581001 85 ntBASIC1.74□□□□□ -2.13
HDAC4P56524 AC013791.1-201ENST00000616619 62 ntBASIC1.74□□□□□ -2.13
HDAC4P56524 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HDAC4P56524 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HDAC4P56524 RNU6-457P-201ENST00000363999 107 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 245.4 ms